Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g046880 Pisum sativum HOM05D000184 ORTHO05D000032 1.9e-53 212.2 105 100.0
Psat1g171360 Pisum sativum HOM05D000184 ORTHO05D000032 4.1e-32 141.4 84 83.3
Medtr2g027860 Medicago truncatula HOM05D000184 ORTHO05D000032 2.2e-30 135.6 85 78.8
Ca_24685_v3 Cicer arietinum L. HOM05D000184 ORTHO05D000032 3.0e-27 125.2 84 76.2
VMungo0540G1492 Vigna mungo HOM05D000184 ORTHO05D000032 1.6e-23 112.8 85 64.7
Lj6g0021259 Lotus japonicus HOM05D000184 ORTHO05D000032 5.9e-23 110.9 84 65.5
Glyma.09G017400 Glycine max HOM05D000184 ORTHO05D000032 8.5e-22 107.1 87 64.4
Lalb_Chr20g0119711 Lupinus albus HOM05D000184 ORTHO05D000032 8.5e-22 107.1 82 65.9
Glyma.15G123100 Glycine max HOM05D000184 ORTHO05D000032 4.2e-21 104.8 84 64.3
Lalb_Chr15g0088451 Lupinus albus HOM05D000184 ORTHO05D000032 8.0e-20 100.5 82 64.6
Phvul.006G134700 Phaseolus vulgaris HOM05D000184 ORTHO05D000032 2.3e-19 99.0 85 57.6
Lalb_Chr18g0057561 Lupinus albus HOM05D000184 ORTHO05D000032 2.6e-18 95.5 81 63.0
Dinv14849 Davidia involucrata HOM05D000184 ORTHO05D000032 9.8e-18 93.6 92 59.8
arahy.Tifrunner.gnm1.ann1.V4D1J0 Arachis hypogaea HOM05D000184 ORTHO05D000032 1.8e-16 89.4 84 59.5
Dinv04379 Davidia involucrata HOM05D000184 ORTHO05D000032 5.4e-16 87.8 93 58.1
CSS0008911 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 2.0e-15 85.9 86 58.1
arahy.Tifrunner.gnm1.ann1.7QB8XJ Arachis hypogaea HOM05D000184 ORTHO05D000032 3.5e-15 85.1 84 58.3
Ciclev10015893m.g Citrus clementina HOM05D000184 ORTHO05D000032 1.0e-14 83.6 92 54.3
Cpa.g.sc27.185 Carica papaya HOM05D000184 ORTHO05D000032 1.7e-14 82.8 92 53.3
Haze_07061 Corylus avellana HOM05D000184 ORTHO05D000032 2.9e-14 82.0 94 50.0
Lj4g0013382 Lotus japonicus HOM05D000184 ORTHO05D000032 2.9e-14 82.0 89 55.1
Sabra06G0001000 Salix brachista HOM05D000184 ORTHO05D000032 2.9e-14 82.0 92 54.3
CiPaw.09G113000 Carya illinoinensis HOM05D000184 ORTHO05D000032 5.0e-14 81.3 89 52.8
TAR627G0260 Trochodendron aralioides HOM05D000184 ORTHO05D000032 6.5e-14 80.9 94 51.1
Atru.chr1.2208 Acer truncatum HOM05D000184 ORTHO05D000032 5.5e-13 77.8 89 53.9
Cfa021530 Carpinus fangiana HOM05D000184 ORTHO05D000032 5.5e-13 77.8 94 47.9
MD10G1342100 Malus domestica HOM05D000184 ORTHO05D000032 1.2e-12 76.6 88 53.4
Sabra16G0007600 Salix brachista HOM05D000184 ORTHO05D000032 1.2e-12 76.6 88 52.3
CiPaw.10G084900 Carya illinoinensis HOM05D000184 ORTHO05D000032 2.1e-12 75.9 94 46.8
Potri.016G001100 Populus trichocarpa HOM05D000184 ORTHO05D000032 2.1e-12 75.9 88 52.3
SalBow8G2349 Salvia bowleyana HOM05D000184 ORTHO05D000032 2.1e-12 75.9 87 55.2
Thecc.06G244300 Theobroma cacao HOM05D000184 ORTHO05D000032 3.6e-12 75.1 92 51.1
COL.COLO4_31962 Corchorus olitorius HOM05D000184 ORTHO05D000032 4.7e-12 74.7 92 51.1
Nitab4.5_0006133g0010 Nicotiana tabacum HOM05D000184 ORTHO05D000032 6.1e-12 74.3 92 51.1
TAR629G3073 Trochodendron aralioides HOM05D000184 ORTHO05D000032 6.1e-12 74.3 87 50.6
Gorai.010G247100 Gossypium raimondii HOM05D000184 ORTHO05D000032 8.0e-12 73.9 92 51.1
Manes.09G072838 Manihot esculenta HOM05D000184 ORTHO05D000032 8.0e-12 73.9 91 49.5
Nitab4.5_0008054g0010 Nicotiana tabacum HOM05D000184 ORTHO05D000032 8.0e-12 73.9 92 51.1
Hma1.2p1_0391F.1_g142810 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 1.4e-11 73.2 86 51.2
CAN.G308.47 Capsicum annuum HOM05D000184 ORTHO05D000032 1.8e-11 72.8 92 47.8
Duzib192G0478 Durio zibethinus HOM05D000184 ORTHO05D000032 2.3e-11 72.4 92 51.1
Gohir.A06G202500 Gossypium hirsutum HOM05D000184 ORTHO05D000032 2.3e-11 72.4 92 50.0
Gohir.D06G219200 Gossypium hirsutum HOM05D000184 ORTHO05D000032 2.3e-11 72.4 92 50.0
Potri.006G000800 Populus trichocarpa HOM05D000184 ORTHO05D000032 2.3e-11 72.4 92 48.9
Rhsim02G0087800 Rhododendron simsii HOM05D000184 ORTHO05D000032 2.3e-11 72.4 92 48.9
PGR004G0480 Punica granatum HOM05D000184 ORTHO05D000032 3.0e-11 72.0 84 52.4
QL05p066208 Quercus lobata HOM05D000184 ORTHO05D000032 3.0e-11 72.0 94 45.7
TWI63G0683 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 4.0e-11 71.6 92 47.8
Duzib160G0600 Durio zibethinus HOM05D000184 ORTHO05D000032 5.2e-11 71.2 92 52.2
Oeu031377.1 Olea europaea HOM05D000184 ORTHO05D000032 8.8e-11 70.5 87 52.9
Prupe.4G000700 Prunus persica HOM05D000184 ORTHO05D000032 8.8e-11 70.5 91 51.6
MD05G1364400 Malus domestica HOM05D000184 ORTHO05D000032 1.2e-10 70.1 97 46.4
arahy.Tifrunner.gnm1.ann1.GS51BL Arachis hypogaea HOM05D000184 ORTHO05D000032 1.5e-10 69.7 93 47.3
MSTRG.14580 Avicennia marina HOM05D000184 ORTHO05D000032 2.0e-10 69.3 84 53.6
PGSC0003DMG400007401 Solanum tuberosum HOM05D000184 ORTHO05D000032 2.0e-10 69.3 86 50.0
Peaxi162Scf00154g00019 Petunia axillaris HOM05D000184 ORTHO05D000032 4.4e-10 68.2 92 45.7
vmacro15708 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 7.5e-10 67.4 90 47.8
Peaxi162Scf00798g00318 Petunia axillaris HOM05D000184 ORTHO05D000032 9.8e-10 67.0 93 45.2
Sopen11g026970 Solanum pennellii HOM05D000184 ORTHO05D000032 9.8e-10 67.0 86 48.8
Oeu017920.3 Olea europaea HOM05D000184 ORTHO05D000032 1.3e-09 66.6 70 57.1
MSTRG.16075 Avicennia marina HOM05D000184 ORTHO05D000032 1.7e-09 66.2 88 50.0
arahy.Tifrunner.gnm1.ann1.WDM4XI Arachis hypogaea HOM05D000184 ORTHO05D000032 2.2e-09 65.9 93 47.3
Eucgr.E04232 Eucalyptus grandis HOM05D000184 ORTHO05D000032 2.8e-09 65.5 84 48.8
Hma1.2p1_0394F.1_g143420 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 2.8e-09 65.5 91 45.1
Solyc11g067280.2 Solanum lycopersicum HOM05D000184 ORTHO05D000032 2.8e-09 65.5 86 47.7
Nitab4.5_0001534g0020 Nicotiana tabacum HOM05D000184 ORTHO05D000032 3.7e-09 65.1 72 50.0
RcHm_v2.0_Chr5g0000071 Rosa chinensis HOM05D000184 ORTHO05D000032 3.7e-09 65.1 90 50.0
CiPaw.05G165400 Carya illinoinensis HOM05D000184 ORTHO05D000032 6.3e-09 64.3 77 49.4
Manes.08G014900 Manihot esculenta HOM05D000184 ORTHO05D000032 8.3e-09 63.9 92 45.7
FvH4_3g00070 Fragaria vesca HOM05D000184 ORTHO05D000032 1.4e-08 63.2 81 49.4
ClCG01G021020 Citrullus lanatus HOM05D000184 ORTHO05D000032 1.8e-08 62.8 85 48.2
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.8e-08 62.8 95 44.2
Rhsim13G0138100 Rhododendron simsii HOM05D000184 ORTHO05D000032 1.8e-08 62.8 87 49.4
SGA_v2.0_scaffold7G03653 Striga asiatica HOM05D000184 ORTHO05D000032 2.4e-08 62.4 89 50.6
Sopen11g011510 Solanum pennellii HOM05D000184 ORTHO05D000032 4.1e-08 61.6 87 43.7
Solyc11g022470.2 Solanum lycopersicum HOM05D000184 ORTHO05D000032 5.4e-08 61.2 87 43.7
PGSC0003DMG400008786 Solanum tuberosum HOM05D000184 ORTHO05D000032 5.4e-08 61.2 92 41.3
TAR626G0613 Trochodendron aralioides HOM05D000184 ORTHO05D000032 5.4e-08 61.2 88 46.6
Migut.M01479 Erythranthe guttata HOM05D000184 ORTHO05D000032 1.6e-07 59.7 82 47.6
Nn1g08293 Nelumbo nucifera HOM05D000184 ORTHO05D000032 1.6e-07 59.7 85 45.9
Nitab4.5_0002948g0070 Nicotiana tabacum HOM05D000184 ORTHO05D000032 1.6e-07 59.7 87 44.8
Eucgr.D00972 Eucalyptus grandis HOM05D000184 ORTHO05D000032 2.0e-07 59.3 84 48.8
MELO3C007988.2 Cucumis melo HOM05D000184 ORTHO05D000032 5.9e-07 57.8 92 42.4
Nn1g07651 Nelumbo nucifera HOM05D000184 ORTHO05D000032 5.9e-07 57.8 89 41.6
Actinidia38943 Actinidia chinensis HOM05D000184 ORTHO05D000032 1.3e-06 56.6 101 40.6
SalBow1G0561 Salvia bowleyana HOM05D000184 ORTHO05D000032 2.3e-06 55.8 87 48.3
SalBow1G6017 Salvia bowleyana HOM05D000184 ORTHO05D000032 2.3e-06 55.8 87 48.3
vmacro03585 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 2.3e-06 55.8 88 47.7
ECA234G1161 Erigeron canadensis HOM05D000184 ORTHO05D000032 5.0e-06 54.7 89 40.4
CsaV3_6G048010 Cucumis sativus L. HOM05D000184 ORTHO05D000032 6.6e-06 54.3 84 45.2
Actinidia34745 Actinidia chinensis HOM05D000184 ORTHO05D000032 8.6e-06 53.9 103 39.8


User provided reference genes

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