Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g043360 Pisum sativum HOM05D006593 ORTHO05D008512 4.0e-204 714.5 360 100.0
Psat2g085480 Pisum sativum HOM05D006593 ORTHO05D008512 5.2e-127 458.4 267 88.0
TPR.G29973 Trifolium pratense HOM05D006593 ORTHO05D008512 2.9e-114 416.0 267 80.1
Medtr5g032210 Medicago truncatula HOM05D006593 ORTHO05D008512 3.4e-110 402.5 267 77.2
Lalb_Chr05g0216291 Lupinus albus HOM05D006593 ORTHO05D008512 1.4e-103 380.6 267 71.2
Glyma.01G023700 Glycine max HOM05D006593 ORTHO05D008512 1.8e-103 380.2 302 65.6
Ca_04534_v3 Cicer arietinum L. HOM05D006593 ORTHO05D008512 6.8e-103 378.3 230 80.0
Lj2g0020402 Lotus japonicus HOM05D006593 ORTHO05D008512 7.5e-102 374.8 294 66.7
Phvul.002G147900 Phaseolus vulgaris HOM05D006593 ORTHO05D008512 2.0e-99 366.7 267 70.8
VMungo1215G1341 Vigna mungo HOM05D006593 ORTHO05D008512 1.6e-96 357.1 267 68.9
arahy.Tifrunner.gnm1.ann1.67PG0W Arachis hypogaea HOM05D006593 ORTHO05D008512 5.4e-84 315.5 275 60.7
arahy.Tifrunner.gnm1.ann1.ZAKH7Z Arachis hypogaea HOM05D006593 ORTHO05D008512 5.4e-84 315.5 275 60.7
CiPaw.07G048200 Carya illinoinensis HOM05D006593 ORTHO05D008512 1.2e-70 271.2 269 52.8
Cfa006891 Carpinus fangiana HOM05D006593 ORTHO05D008512 5.4e-68 262.3 271 53.5
MD15G1313700 Malus domestica HOM05D006593 ORTHO05D008512 5.4e-68 262.3 269 50.9
Prupe.6G198700 Prunus persica HOM05D006593 ORTHO05D008512 1.2e-67 261.2 269 51.3
Dinv01622 Davidia involucrata HOM05D006593 ORTHO05D008512 3.5e-67 259.6 256 53.5
Haze_03860 Corylus avellana HOM05D006593 ORTHO05D008512 3.0e-66 256.5 286 51.4
FAN19G1905 Fragaria x ananassa HOM05D006593 ORTHO05D008512 1.1e-65 254.6 285 48.8
FvH4_1g19740 Fragaria vesca HOM05D006593 ORTHO05D008512 1.5e-65 254.2 285 48.8
Cpa.g.sc55.33 Carica papaya HOM05D006593 ORTHO05D008512 4.3e-65 252.7 247 53.8
QL06p035616 Quercus lobata HOM05D006593 ORTHO05D008512 4.3e-65 252.7 271 52.0
RcHm_v2.0_Chr2g0111321 Rosa chinensis HOM05D006593 ORTHO05D008512 9.6e-65 251.5 281 48.8
FAN28G2735 Fragaria x ananassa HOM05D006593 ORTHO05D008512 1.6e-64 250.8 285 48.1
Manes.13G098700 Manihot esculenta HOM05D006593 ORTHO05D008512 2.8e-64 250.0 259 51.7
CSS0021282 Camellia sinensis var. sinensis HOM05D006593 ORTHO05D008512 1.1e-63 248.1 259 49.4
TAR628G0061 Trochodendron aralioides HOM05D006593 ORTHO05D008512 3.1e-63 246.5 261 51.0
Lju188A1G72 Lonicera japonica HOM05D006593 ORTHO05D008512 5.3e-63 245.7 238 53.4
Potri.007G010600 Populus trichocarpa HOM05D006593 ORTHO05D008512 9.0e-63 245.0 260 50.8
COL.COLO4_27348 Corchorus olitorius HOM05D006593 ORTHO05D008512 7.6e-62 241.9 249 50.6
Atru.chr3.1259 Acer truncatum HOM05D006593 ORTHO05D008512 1.3e-61 241.1 260 50.8
Duzib147G0804 Durio zibethinus HOM05D006593 ORTHO05D008512 2.2e-61 240.4 247 52.2
Actinidia06518 Actinidia chinensis HOM05D006593 ORTHO05D008512 4.9e-61 239.2 259 49.4
Sabra07G0008000 Salix brachista HOM05D006593 ORTHO05D008512 4.9e-61 239.2 260 49.6
PSO017G0451 Papaver somniferum HOM05D006593 ORTHO05D008512 6.4e-61 238.8 258 50.8
Rhsim10G0172300 Rhododendron simsii HOM05D006593 ORTHO05D008512 5.5e-60 235.7 259 47.1
Thecc.01G091500 Theobroma cacao HOM05D006593 ORTHO05D008512 7.1e-60 235.3 249 51.0
Gohir.A02G131300 Gossypium hirsutum HOM05D006593 ORTHO05D008512 3.5e-59 233.0 236 50.4
PSO170G1479 Papaver somniferum HOM05D006593 ORTHO05D008512 6.0e-59 232.3 258 49.2
Gorai.003G043400 Gossypium raimondii HOM05D006593 ORTHO05D008512 1.3e-58 231.1 236 50.0
Gohir.D03G042700 Gossypium hirsutum HOM05D006593 ORTHO05D008512 2.3e-58 230.3 236 50.0
TWI53G0534 Tripterygium wilfordii HOM05D006593 ORTHO05D008512 8.7e-58 228.4 237 48.5
Aqoxy5G01304_Aqoxy5G01305 Aquilegia oxysepala HOM05D006593 ORTHO05D008512 1.5e-57 227.6 251 49.0
CANSAT01G0713 Cannabis sativa HOM05D006593 ORTHO05D008512 1.9e-57 227.3 260 50.0
Nn5g29896 Nelumbo nucifera HOM05D006593 ORTHO05D008512 4.3e-57 226.1 261 50.6
BolC8t51623H Brassica oleracea HOM05D006593 ORTHO05D008512 5.6e-57 225.7 260 46.5
DCAR_014189 Daucus carota HOM05D006593 ORTHO05D008512 7.4e-57 225.3 259 47.5
Thhalv10000032m.g Eutrema salsugineum HOM05D006593 ORTHO05D008512 9.6e-57 224.9 260 45.4
Sopen11g005350 Solanum pennellii HOM05D006593 ORTHO05D008512 1.3e-56 224.6 236 50.4
Solyc11g010550.2 Solanum lycopersicum HOM05D006593 ORTHO05D008512 3.7e-56 223.0 236 50.0
PGSC0003DMG400016138 Solanum tuberosum HOM05D006593 ORTHO05D008512 3.7e-56 223.0 236 50.4
THA.LOC104824911 Tarenaya hassleriana HOM05D006593 ORTHO05D008512 1.1e-55 221.5 264 45.5
Carub.0004s0170 Capsella rubella HOM05D006593 ORTHO05D008512 1.4e-55 221.1 261 45.2
A09p57440 Brassica napus HOM05D006593 ORTHO05D008512 2.4e-55 220.3 260 45.4
BraA09t41136Z Brassica rapa HOM05D006593 ORTHO05D008512 2.4e-55 220.3 260 45.4
BcaC07g41050 Brassica carinata HOM05D006593 ORTHO05D008512 3.1e-55 219.9 260 46.5
C08p40530 Brassica napus HOM05D006593 ORTHO05D008512 3.1e-55 219.9 260 46.5
Sed0000560 Sechium edule HOM05D006593 ORTHO05D008512 3.1e-55 219.9 267 47.2
vmacro13002 Vaccinium macrocarpon HOM05D006593 ORTHO05D008512 1.2e-54 218.0 259 46.3
AL4G12066 Arabidopsis lyrata HOM05D006593 ORTHO05D008512 1.5e-54 217.6 261 45.2
BcaB08g35096 Brassica carinata HOM05D006593 ORTHO05D008512 1.5e-54 217.6 260 46.5
Nitab4.5_0004153g0020 Nicotiana tabacum HOM05D006593 ORTHO05D008512 1.5e-54 217.6 236 50.0
Eucgr.I00552 Eucalyptus grandis HOM05D006593 ORTHO05D008512 3.4e-54 216.5 306 41.8
AT2G22530 Arabidopsis thaliana HOM05D006593 ORTHO05D008512 5.8e-54 215.7 261 45.6
Nitab4.5_0001468g0100 Nicotiana tabacum HOM05D006593 ORTHO05D008512 1.3e-53 214.5 234 49.1
Sp4g01570 Schrenkiella parvula HOM05D006593 ORTHO05D008512 1.3e-53 214.5 260 45.0
Ciclev10003755m.g Citrus clementina HOM05D006593 ORTHO05D008512 2.2e-53 213.8 259 46.7
EL10Ac6g15212 Beta vulgaris HOM05D006593 ORTHO05D008512 4.9e-53 212.6 264 47.3
AUR62003656 Chenopodium quinoa HOM05D006593 ORTHO05D008512 6.5e-53 212.2 260 46.5
CsaV3_6G045050 Cucumis sativus L. HOM05D006593 ORTHO05D008512 6.5e-53 212.2 267 47.6
AUR62017964 Chenopodium quinoa HOM05D006593 ORTHO05D008512 1.1e-52 211.5 294 42.9
PGR031G1437 Punica granatum HOM05D006593 ORTHO05D008512 1.4e-52 211.1 249 49.4
Sc16g0000540 Simmondsia chinensis HOM05D006593 ORTHO05D004993 1.4e-52 211.1 236 48.7
Hund16537 Selenicereus undatus HOM05D006593 ORTHO05D008512 1.9e-52 210.7 237 48.1
Ah.02g123650 Amaranthus hybridus HOM05D006593 ORTHO05D008512 6.0e-51 205.7 260 44.2
FAN26G1425 Fragaria x ananassa HOM05D006593 ORTHO05D008512 1.3e-50 204.5 180 56.7
Cc07_g14190 Coffea canephora HOM05D006593 ORTHO05D008512 3.9e-50 203.0 259 43.6
SGA_v2.0_scaffold45G17238 Striga asiatica HOM05D006593 ORTHO05D008512 1.3e-48 198.0 256 44.1
ECA246G1560 Erigeron canadensis HOM05D006593 ORTHO05D004993 2.8e-48 196.8 246 48.4
Migut.K00792 Erythranthe guttata HOM05D006593 ORTHO05D008512 3.7e-48 196.4 288 40.3
Oeu012466.1 Olea europaea HOM05D006593 ORTHO05D008512 1.4e-47 194.5 291 43.0
SalBow5G0109 Salvia bowleyana HOM05D006593 ORTHO05D008512 2.0e-46 190.7 260 40.8
CAN.G1843.3 Capsicum annuum HOM05D006593 ORTHO05D008512 1.4e-44 184.5 290 37.9
CDE03G0370 Ceratophyllum demersum HOM05D006593 ORTHO05D008512 1.9e-44 184.1 261 40.2
HanXRQChr17g0550591 Helianthus annuus HOM05D006593 ORTHO05D008512 2.5e-44 183.7 246 44.7
ATR0665G270 Amborella trichopoda HOM05D006593 ORTHO05D008512 2.1e-43 180.6 248 43.1
Eucgr.I00548 Eucalyptus grandis HOM05D006593 ORTHO05D008512 2.1e-43 180.6 261 42.1
Peaxi162Scf00778g00014 Petunia axillaris HOM05D006593 ORTHO05D008512 1.3e-42 177.9 197 47.2
Psat3g119640 Pisum sativum HOM05D003662 ORTHO05D001824 2.3e-42 177.2 138 71.0
Psat2g063360 Pisum sativum HOM05D004963 ORTHO05D006638 8.7e-42 175.3 129 74.4
Os02g0781600 Oryza sativa ssp. japonica HOM05D006593 ORTHO05D008512 7.4e-41 172.2 250 44.8
GSVIVG01006735001 Vitis vinifera HOM05D006593 ORTHO05D008512 9.7e-41 171.8 178 50.6
Zm00001eb257050 Zea mays HOM05D006593 ORTHO05D008512 5.3e-39 166.0 251 41.8
Lsat_1_v5_gn_3_61401 Lactuca sativa HOM05D006593 ORTHO05D008512 4.5e-38 162.9 210 46.2
unitig_748.g8644 Utricularia gibba HOM05D006593 ORTHO05D008512 1.8e-34 151.0 293 34.8
Psat5g196240 Pisum sativum HOM05D003662 ORTHO05D001824 2.8e-32 143.7 149 57.7
Psat1g216760 Pisum sativum HOM05D003662 ORTHO05D001824 1.1e-31 141.7 107 72.0
MBI06_g07364_MAGBIO Magnolia biondii HOM05D006593 ORTHO05D008512 3.1e-31 140.2 180 43.3
Psat4g074000 Pisum sativum HOM05D004029 ORTHO05D004613 1.5e-30 137.9 104 70.2
TPR.G13626 Trifolium pratense HOM05D003662 ORTHO05D001824 1.6e-27 127.9 122 63.1
Medtr2g008750 Medicago truncatula HOM05D003662 ORTHO05D001824 3.7e-24 116.7 121 59.5
Mapoly0005s0227 Marchantia polymorpha HOM05D006593 ORTHO05D008512 1.6e-22 111.3 217 31.8
Pp3c8_800 Physcomitrium patens HOM05D006593 ORTHO05D008512 1.6e-22 111.3 237 34.6
Ca_00131_v3 Cicer arietinum L. HOM05D003662 ORTHO05D001824 2.6e-22 110.5 132 55.3
MELO3C007718.2 Cucumis melo HOM05D006593 ORTHO05D008512 8.0e-19 99.0 217 33.2
TPR.G13599 Trifolium pratense HOM05D000143 ORTHO05D001824 2.2e-16 90.9 63 76.2
arahy.Tifrunner.gnm1.ann1.9W20Y7 Arachis hypogaea HOM05D003662 ORTHO05D001824 7.0e-15 85.9 126 45.2
CAN.G1724.3 Capsicum annuum HOM05D006593 ORTHO05D008512 9.1e-15 85.5 73 58.9
Psat4g170200 Pisum sativum HOM05D003662 ORTHO05D001824 2.7e-14 84.0 126 46.0
Glyma.08G179400 Glycine max HOM05D003662 ORTHO05D001824 3.5e-14 83.6 131 46.6
Glyma.15G053000 Glycine max HOM05D003662 ORTHO05D001824 3.5e-14 83.6 132 47.0
VMungo0540G1102 Vigna mungo HOM05D003662 ORTHO05D001824 7.2e-12 75.9 135 40.0
Lj6g0024827 Lotus japonicus HOM05D003662 ORTHO05D001824 6.1e-11 72.8 125 44.8
Phvul.006G206900 Phaseolus vulgaris HOM05D003662 ORTHO05D001824 8.0e-11 72.4 135 39.3
HPP92_005975 Vanilla planifolia HOM05D006593 ORTHO05D008512 1.0e-10 72.0 103 47.6
arahy.Tifrunner.gnm1.ann1.TKBB16 Arachis hypogaea HOM05D003662 ORTHO05D001824 5.2e-10 69.7 128 38.3
Lalb_Chr10g0097751 Lupinus albus HOM05D003662 ORTHO05D001824 9.8e-09 65.5 125 41.6
Lalb_Chr04g0256571 Lupinus albus HOM05D003662 ORTHO05D001824 8.3e-08 62.4 123 39.0
Lalb_Chr20g0123061 Lupinus albus HOM05D003662 ORTHO05D001824 7.0e-07 59.3 127 41.7
Glyma.05G118300 Glycine max HOM05D003662 ORTHO05D001824 2.7e-06 57.4 129 36.4
Glyma.08G073300 Glycine max HOM05D003662 ORTHO05D001824 5.9e-06 56.2 129 36.4
Lj4g0005319 Lotus japonicus HOM05D003662 ORTHO05D001824 5.9e-06 56.2 128 36.7


User provided reference genes

Program Settings