Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 8.9e-105 383.6 199 100.0
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 2.1e-85 319.3 195 83.1
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 1.0e-84 317.0 195 82.1
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 2.3e-84 315.8 211 79.6
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 7.1e-78 294.3 155 96.1
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 8.7e-76 287.3 196 74.5
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 3.7e-74 282.0 192 73.4
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 2.6e-72 275.8 197 72.1
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 1.4e-70 270.0 199 69.3
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 3.0e-68 262.3 182 71.4
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 1.3e-58 230.3 194 58.2
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 1.7e-55 219.9 194 58.2
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 3.8e-55 218.8 191 56.0
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.4e-54 216.9 200 57.5
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 1.4e-54 216.9 200 56.0
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 3.2e-54 215.7 193 58.5
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 1.2e-53 213.8 195 54.4
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 2.1e-53 213.0 195 55.4
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 1.8e-52 209.9 195 53.3
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 3.0e-52 209.1 196 53.1
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 3.9e-52 208.8 191 58.1
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 1.5e-51 206.8 202 52.5
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.0e-51 206.5 191 54.5
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 5.7e-51 204.9 196 55.1
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 9.7e-51 204.1 161 63.4
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 2.8e-50 202.6 201 51.7
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 6.3e-50 201.4 195 56.4
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 6.3e-50 201.4 195 55.4
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 8.2e-50 201.1 198 52.0
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 2.4e-49 199.5 194 54.6
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 5.3e-49 198.4 190 53.7
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 1.2e-48 197.2 194 52.1
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 2.6e-48 196.1 200 54.5
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 5.9e-48 194.9 195 53.3
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.0e-47 194.1 195 51.8
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.7e-47 193.4 164 58.5
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 2.2e-47 193.0 199 49.2
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 3.8e-47 192.2 195 52.3
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 5.0e-47 191.8 191 52.9
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 6.5e-47 191.4 194 52.6
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 1.1e-46 190.7 196 49.5
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 1.1e-46 190.7 196 51.5
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 1.5e-46 190.3 191 51.8
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.9e-46 189.9 187 51.9
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 3.2e-46 189.1 191 51.3
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 3.2e-46 189.1 151 62.9
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 9.4e-46 187.6 197 50.3
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.6e-45 186.8 197 49.2
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 2.1e-45 186.4 193 50.8
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 3.6e-45 185.7 178 52.8
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 3.6e-45 185.7 178 52.8
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.7e-45 185.3 195 51.3
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 6.1e-45 184.9 195 51.8
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 3.0e-44 182.6 191 51.3
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 6.7e-44 181.4 193 49.7
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 6.7e-44 181.4 199 47.2
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 3.3e-43 179.1 182 50.5
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 5.7e-43 178.3 199 47.2
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 3.7e-42 175.6 137 62.8
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 4.8e-42 175.3 200 48.5
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 2.4e-41 172.9 179 50.3
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 9.1e-41 171.0 136 58.8
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.3e-39 167.2 138 62.3
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 1.3e-39 167.2 150 54.0
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 1.5e-38 163.7 168 51.2
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 1.6e-37 160.2 198 48.0
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 2.1e-37 159.8 141 58.2
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 4.7e-37 158.7 197 41.6
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 8.0e-37 157.9 136 55.1
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 4.0e-36 155.6 190 50.0
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 3.7e-34 149.1 141 54.6
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 6.3e-34 148.3 200 43.0
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 2.4e-33 146.4 196 42.3
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 2.4e-33 146.4 197 41.6
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 1.6e-32 143.7 200 41.5
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 2.0e-32 143.3 198 39.9
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 3.5e-32 142.5 195 43.1
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 3.5e-32 142.5 117 60.7
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 4.5e-32 142.1 191 41.9
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 7.7e-32 141.4 192 44.8
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 1.7e-31 140.2 202 42.1
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 6.5e-31 138.3 201 41.3
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 3.2e-30 136.0 199 41.2
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 3.2e-30 136.0 196 41.3
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 5.5e-30 135.2 200 41.5
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 5.5e-30 135.2 189 40.7
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 1.6e-29 133.7 196 40.8
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 1.6e-29 133.7 196 40.8
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 5.2e-28 128.6 182 40.7
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 6.8e-28 128.3 145 45.5
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 9.8e-27 124.4 190 38.4
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 6.3e-26 121.7 200 42.0
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 7.0e-25 118.2 130 50.0
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 1.3e-23 114.0 201 38.8
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 3.4e-19 99.4 121 42.1
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 5.7e-19 98.6 76 61.8
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 7.5e-19 98.2 212 32.1
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 1.0e-15 87.8 152 38.2
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 5.0e-15 85.5 120 42.5
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 6.2e-13 78.6 198 26.3
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 1.4e-12 77.4 135 37.8
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 1.4e-12 77.4 135 37.8
Lalb_Chr04g0250741 Lupinus albus HOM05D007615 ORTHO05D009643 2.7e-08 63.2 43 67.4


User provided reference genes

Program Settings