Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g024080 Pisum sativum HOM05D000823 ORTHO05D000088 4.2e-195 684.5 339 100.0
Psat6g011480 Pisum sativum HOM05D000823 ORTHO05D000088 1.9e-91 340.1 219 80.8
Ca_13317_v3 Cicer arietinum L. HOM05D000823 ORTHO05D000088 6.7e-76 288.5 247 64.0
Medtr1g021270 Medicago truncatula HOM05D000823 ORTHO05D000088 5.6e-75 285.4 247 65.2
TPR.G13699 Trifolium pratense HOM05D000823 ORTHO05D000088 1.4e-73 280.8 225 68.9
Lj5g0027331 Lotus japonicus HOM05D000823 ORTHO05D000088 2.4e-65 253.4 225 62.2
Glyma.14G079200 Glycine max HOM05D000823 ORTHO05D000088 2.9e-63 246.5 224 60.3
Lalb_Chr22g0355281 Lupinus albus HOM05D000823 ORTHO05D000088 1.1e-62 244.6 225 60.0
Glyma.17G245900 Glycine max HOM05D000823 ORTHO05D000088 1.9e-62 243.8 224 60.3
TPR.G15766 Trifolium pratense HOM05D000823 ORTHO05D000088 2.5e-59 233.4 226 58.4
VMungo0647G0862 Vigna mungo HOM05D000823 ORTHO05D000088 1.1e-57 228.0 225 58.7
Medtr1g021320 Medicago truncatula HOM05D000823 ORTHO05D000088 1.0e-55 221.5 227 56.4
Phvul.001G018500 Phaseolus vulgaris HOM05D000823 ORTHO05D000088 1.3e-55 221.1 224 56.2
arahy.Tifrunner.gnm1.ann1.8D6Z2X Arachis hypogaea HOM05D000823 ORTHO05D000088 2.2e-55 220.3 227 56.4
arahy.Tifrunner.gnm1.ann1.NFB9X0 Arachis hypogaea HOM05D000823 ORTHO05D000088 2.2e-55 220.3 227 56.4
CiPaw.15G066400 Carya illinoinensis HOM05D000823 ORTHO05D000088 5.9e-48 195.7 296 40.5
QL02p006444 Quercus lobata HOM05D000823 ORTHO05D000088 2.9e-47 193.4 213 48.4
CANSAT25G0071 Cannabis sativa HOM05D000823 ORTHO05D000088 5.5e-46 189.1 229 47.2
Cfa018483 Carpinus fangiana HOM05D000823 ORTHO05D000088 7.2e-46 188.7 214 47.7
COL.COLO4_26426 Corchorus olitorius HOM05D000823 ORTHO05D000088 1.5e-43 181.0 204 47.5
Thecc.08G016800 Theobroma cacao HOM05D000823 ORTHO05D000088 3.3e-43 179.9 204 48.0
THA.LOC104803403 Tarenaya hassleriana HOM05D000823 ORTHO05D000088 2.2e-42 177.2 204 48.5
Duzib093G1908 Durio zibethinus HOM05D000823 ORTHO05D000088 2.8e-42 176.8 198 48.0
Potri.014G036800 Populus trichocarpa HOM05D000823 ORTHO05D000088 4.8e-42 176.0 220 46.4
MELO3C018249.2 Cucumis melo HOM05D000823 ORTHO05D000088 7.0e-41 172.2 253 39.1
Manes.05G168900 Manihot esculenta HOM05D000823 ORTHO05D000088 2.0e-40 170.6 230 44.3
CsaV3_3G044580 Cucumis sativus L. HOM05D000823 ORTHO05D000088 2.6e-40 170.2 227 41.0
Rhsim07G0234100 Rhododendron simsii HOM05D000823 ORTHO05D000088 5.9e-40 169.1 223 43.9
RcHm_v2.0_Chr6g0300031 Rosa chinensis HOM05D000823 ORTHO05D000088 5.9e-40 169.1 205 46.8
Dinv39357 Davidia involucrata HOM05D000823 ORTHO05D000088 1.3e-39 167.9 207 42.0
vmacro04480 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 1.7e-39 167.5 220 45.0
GSVIVG01009586001 Vitis vinifera HOM05D000823 ORTHO05D000088 5.0e-39 166.0 225 41.3
Sabra14G0026500 Salix brachista HOM05D000823 ORTHO05D000088 1.5e-38 164.5 230 43.5
MSTRG.1316 Avicennia marina HOM05D000823 ORTHO05D000088 9.4e-38 161.8 190 44.7
Atru.chr13.593 Acer truncatum HOM05D000823 ORTHO05D000088 1.6e-37 161.0 219 44.3
FvH4_2g40640 Fragaria vesca HOM05D000823 ORTHO05D000088 2.1e-37 160.6 207 44.4
MD08G1039600 Malus domestica HOM05D000823 ORTHO05D000088 3.6e-37 159.8 227 44.9
Eucgr.F02399 Eucalyptus grandis HOM05D000823 ORTHO05D000088 2.3e-36 157.1 216 43.5
Gohir.A03G116300 Gossypium hirsutum HOM05D000823 ORTHO05D000088 2.3e-36 157.1 202 43.1
Hma1.2p1_0260F.1_g104520 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 3.0e-36 156.8 196 44.9
Gorai.005G105400 Gossypium raimondii HOM05D000823 ORTHO05D000088 5.2e-36 156.0 201 43.3
SGA_v2.0_scaffold82G26218 Striga asiatica HOM05D000823 ORTHO05D000088 5.2e-36 156.0 202 42.6
Actinidia38035 Actinidia chinensis HOM05D000823 ORTHO05D000088 2.0e-35 154.1 217 40.1
TPR.G13675 Trifolium pratense HOM05D000823 ORTHO05D000088 2.6e-35 153.7 129 62.8
SalBow7G0768 Salvia bowleyana HOM05D000823 ORTHO05D000088 3.3e-35 153.3 199 42.7
Migut.C00649 Erythranthe guttata HOM05D000823 ORTHO05D000088 9.7e-35 151.8 195 44.1
Oeu006163.1 Olea europaea HOM05D000823 ORTHO05D000088 1.3e-34 151.4 200 43.5
TWI12G0966 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 1.3e-34 151.4 217 41.0
Hma1.2p1_0023F.1_g015270 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 2.2e-34 150.6 225 40.4
Cc10_g03680 Coffea canephora HOM05D000823 ORTHO05D000088 3.7e-34 149.8 205 41.0
Ciclev10000881m.g Citrus clementina HOM05D000823 ORTHO05D000088 4.8e-34 149.4 218 39.9
Nitab4.5_0000068g0140 Nicotiana tabacum HOM05D000823 ORTHO05D000088 6.3e-34 149.1 213 40.4
MD15G1034200 Malus domestica HOM05D000823 ORTHO05D000088 1.1e-33 148.3 227 43.2
Nitab4.5_0002280g0040 Nicotiana tabacum HOM05D000823 ORTHO05D000088 1.8e-33 147.5 191 42.4
Lsat_1_v5_gn_1_19200 Lactuca sativa HOM05D000823 ORTHO05D000088 3.1e-33 146.7 214 40.7
PGR031G0338 Punica granatum HOM05D000823 ORTHO05D000088 3.1e-33 146.7 212 43.4
DCAR_012760 Daucus carota HOM05D000823 ORTHO05D000088 1.6e-32 144.4 203 38.4
CAN.G371.85 Capsicum annuum HOM05D000823 ORTHO05D000088 2.0e-32 144.1 212 40.1
HanXRQChr04g0104181 Helianthus annuus HOM05D000823 ORTHO05D000088 3.5e-32 143.3 206 40.8
Peaxi162Scf01514g00024 Petunia axillaris HOM05D000823 ORTHO05D000088 1.0e-31 141.7 216 37.0
Solyc04g079590.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 1.0e-31 141.7 207 40.1
Sopen04g033170 Solanum pennellii HOM05D000823 ORTHO05D000088 1.0e-31 141.7 207 39.6
ECA247G3085 Erigeron canadensis HOM05D000823 ORTHO05D000088 1.9e-30 137.5 208 39.4
EL10Ac1g01749 Beta vulgaris HOM05D000823 ORTHO05D000088 9.8e-27 125.2 247 31.6
AUR62033880 Chenopodium quinoa HOM05D000823 ORTHO05D000088 4.8e-26 122.9 247 35.2
Ah.11g043200 Amaranthus hybridus HOM05D000823 ORTHO05D000088 1.0e-23 115.2 232 32.8
Medtr1g021330 Medicago truncatula HOM05D000823 ORTHO05D000088 1.0e-23 115.2 72 68.1
Gohir.D02G093100 Gossypium hirsutum HOM05D000823 ORTHO05D000088 6.6e-23 112.5 173 38.7
TPR.G32518 Trifolium pratense HOM05D000823 ORTHO05D000088 1.5e-22 111.3 73 63.0
Medtr1g021360 Medicago truncatula HOM05D000823 ORTHO05D000088 8.0e-21 105.5 66 69.7
Medtr1g021440 Medicago truncatula HOM05D000823 ORTHO05D000088 8.0e-21 105.5 74 60.8
Medtr1g021435 Medicago truncatula HOM05D000823 ORTHO05D000088 1.0e-20 105.1 91 50.5
Cpa.g.c39547 Carica papaya HOM05D000823 ORTHO05D000088 4.0e-20 103.2 76 60.5
Medtr1g021295 Medicago truncatula HOM05D000823 ORTHO05D000088 4.0e-20 103.2 69 69.6
Prupe.1G388200 Prunus persica HOM05D000823 ORTHO05D000088 5.2e-20 102.8 149 43.6
Medtr1g021400 Medicago truncatula HOM05D000823 ORTHO05D000088 2.0e-19 100.9 73 58.9
FAN27G1265 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.6e-19 100.5 138 40.6
TPR.G15757 Trifolium pratense HOM05D000823 ORTHO05D000088 4.4e-19 99.8 93 58.1
FAN15G0917 Fragaria x ananassa HOM05D000823 ORTHO05D000088 5.7e-19 99.4 138 40.6
Medtr1g021410 Medicago truncatula HOM05D000823 ORTHO05D000088 1.7e-18 97.8 73 54.8
Medtr1g021350 Medicago truncatula HOM05D000823 ORTHO05D000088 3.2e-17 93.6 73 63.0
arahy.Tifrunner.gnm1.ann1.00BQAA Arachis hypogaea HOM05D000823 ORTHO05D000088 7.0e-17 92.4 66 62.1
Medtr1g021380 Medicago truncatula HOM05D000823 ORTHO05D000088 7.0e-17 92.4 76 55.3
TPR.G726 Trifolium pratense HOM05D000823 ORTHO05D000088 1.2e-16 91.7 69 66.7
Hund26609 Selenicereus undatus HOM05D000823 ORTHO05D000088 1.6e-16 91.3 250 28.8
Medtr6g036740 Medicago truncatula HOM05D000823 ORTHO05D000088 1.1e-14 85.1 69 59.4
Sc15g0006570 Simmondsia chinensis HOM05D000823 ORTHO05D000088 5.6e-14 82.8 140 36.4
TPR.G34489 Trifolium pratense HOM05D000823 ORTHO05D000088 9.5e-14 82.0 83 53.0
TAR376G0237 Trochodendron aralioides HOM05D000823 ORTHO05D000088 8.9e-12 75.5 66 53.0
Rhsim11G0170400 Rhododendron simsii HOM05D000823 ORTHO05D000088 1.3e-10 71.6 79 44.3
CSS0037658 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 5.4e-09 66.2 76 44.7
TWI79G1075 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 9.2e-09 65.5 60 50.0
ClCG05G019470 Citrullus lanatus HOM05D000823 ORTHO05D000088 1.2e-08 65.1 203 27.1
Prupe.8G113100 Prunus persica HOM05D000823 ORTHO05D000088 1.6e-08 64.7 74 40.5
TAR625G1233 Trochodendron aralioides HOM05D000823 ORTHO05D000088 1.6e-08 64.7 60 51.7
Nitab4.5_0001401g0160 Nicotiana tabacum HOM05D000395 ORTHO05D000088 2.0e-08 64.3 212 26.4
Aqoxy1G00852 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 6.0e-08 62.8 63 46.0
CAN.G322.81 Capsicum annuum HOM05D000395 ORTHO05D002065 6.0e-08 62.8 214 25.7
Nitab4.5_0001401g0170 Nicotiana tabacum HOM05D000823 ORTHO05D000088 6.0e-08 62.8 60 43.3
CANSAT01G1431 Cannabis sativa HOM05D000395 ORTHO05D000088 7.8e-08 62.4 204 25.0
Lalb_Chr19g0126241 Lupinus albus HOM05D000395 ORTHO05D000088 7.8e-08 62.4 120 34.2
Cc02_g18270 Coffea canephora HOM05D000823 ORTHO05D000088 1.0e-07 62.0 77 45.5
Nn5g29398 Nelumbo nucifera HOM05D000823 ORTHO05D000088 1.0e-07 62.0 182 28.6
Gorai.007G209200 Gossypium raimondii HOM05D000395 ORTHO05D000088 1.3e-07 61.6 71 39.4
Solyc01g108930.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 1.3e-07 61.6 58 48.3
Haze_17590 Corylus avellana HOM05D000823 ORTHO05D000088 1.7e-07 61.2 49 57.1
GSVIVG01031850001 Vitis vinifera HOM05D000823 ORTHO05D009132 2.3e-07 60.8 75 41.3
Sopen01g051130 Solanum pennellii HOM05D000823 ORTHO05D000088 3.0e-07 60.5 58 48.3
Cfa004943 Carpinus fangiana HOM05D001372 ORTHO05D002010 5.0e-07 59.7 77 39.0
TWI09G0236 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 5.0e-07 59.7 95 36.8
Nn8g40849 Nelumbo nucifera HOM05D000823 ORTHO05D000088 6.6e-07 59.3 67 46.3
QL06p043901 Quercus lobata HOM05D000395 ORTHO05D000088 6.6e-07 59.3 71 39.4
CAN.G322.80 Capsicum annuum HOM05D000823 ORTHO05D000088 8.6e-07 58.9 83 34.9
PSO675G3530 Papaver somniferum HOM05D000395 ORTHO05D000088 1.5e-06 58.2 191 25.7
Hund29104 Selenicereus undatus HOM05D008449 ORTHO05D010615 1.5e-06 58.2 72 41.7
Gohir.A11G188800 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.9e-06 57.8 71 38.0
Gohir.A12G068300 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.9e-06 57.8 160 24.4
Prupe.7G143800 Prunus persica HOM05D000395 ORTHO05D000088 2.5e-06 57.4 84 38.1
MD00G1022000 Malus domestica HOM05D000395 ORTHO05D000088 3.3e-06 57.0 97 30.9
FvH4_6g38690 Fragaria vesca HOM05D000395 ORTHO05D000088 5.6e-06 56.2 209 28.2
FAN14G4811 Fragaria x ananassa HOM05D000395 ORTHO05D000088 5.6e-06 56.2 209 28.2
Gohir.D03G019650 Gossypium hirsutum HOM05D000395 ORTHO05D018968 5.6e-06 56.2 88 33.0
PSO675G3266 Papaver somniferum HOM05D000395 ORTHO05D000088 5.6e-06 56.2 203 25.1
RcHm_v2.0_Chr6g0259811 Rosa chinensis HOM05D000823 ORTHO05D009132 5.6e-06 56.2 60 46.7
Thecc.01G047000 Theobroma cacao HOM05D000395 ORTHO05D000088 5.6e-06 56.2 74 37.8
Nitab4.5_0013011g0010 Nicotiana tabacum HOM05D000395 ORTHO05D000088 7.3e-06 55.8 259 25.5
Gohir.D12G068125 Gossypium hirsutum HOM05D000395 ORTHO05D000088 9.5e-06 55.5 70 34.3
QL11p039132 Quercus lobata HOM05D000823 ORTHO05D000088 9.5e-06 55.5 60 46.7
Rhsim02G0167600 Rhododendron simsii HOM05D000395 ORTHO05D000088 9.5e-06 55.5 83 34.9
GSVIVG01031848001 Vitis vinifera HOM05D000823 ORTHO05D000088 9.5e-06 55.5 69 40.6


User provided reference genes

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