Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g022840 Pisum sativum HOM05D005119 ORTHO05D006338 3.2e-122 441.8 232 100.0
Ca_06151_v3 Cicer arietinum L. HOM05D005119 ORTHO05D006338 1.7e-115 419.5 234 95.3
TPR.G11644 Trifolium pratense HOM05D005119 ORTHO05D006338 2.7e-113 412.1 232 94.0
Medtr5g087720 Medicago truncatula HOM05D005119 ORTHO05D006338 2.6e-111 405.6 225 95.1
Lalb_Chr17g0347491 Lupinus albus HOM05D005119 ORTHO05D006338 1.8e-109 399.4 232 91.4
Glyma.02G274200 Glycine max HOM05D005119 ORTHO05D006338 1.3e-107 393.3 232 88.8
SalBow3G0587 Salvia bowleyana HOM05D005119 ORTHO05D006338 2.9e-107 392.1 229 90.0
LjContig00564g0012096 Lotus japonicus HOM05D005119 ORTHO05D006338 5.0e-107 391.3 232 90.1
CSS0022741 Camellia sinensis var. sinensis HOM05D005119 ORTHO05D006338 1.1e-106 390.2 232 87.9
RcHm_v2.0_Chr5g0049761 Rosa chinensis HOM05D005119 ORTHO05D006338 1.1e-106 390.2 228 89.5
Eucgr.B03785 Eucalyptus grandis HOM05D005119 ORTHO05D006338 1.9e-106 389.4 232 87.1
Glyma.14G041900 Glycine max HOM05D005119 ORTHO05D006338 4.2e-106 388.3 234 88.5
Rhsim13G0201000 Rhododendron simsii HOM05D005119 ORTHO05D006338 4.2e-106 388.3 232 86.2
Phvul.008G207500 Phaseolus vulgaris HOM05D005119 ORTHO05D006338 5.5e-106 387.9 233 88.4
Prupe.6G153600 Prunus persica HOM05D005119 ORTHO05D006338 7.2e-106 387.5 232 87.1
Atru.chr3.2860 Acer truncatum HOM05D005119 ORTHO05D006338 9.4e-106 387.1 232 87.9
VMungo0647G2262 Vigna mungo HOM05D005119 ORTHO05D006338 1.6e-105 386.3 233 88.0
AT5G21070 Arabidopsis thaliana HOM05D005119 ORTHO05D006338 2.1e-105 386.0 234 87.2
Lj6g0018237 Lotus japonicus HOM05D005119 ORTHO05D006338 2.7e-105 385.6 232 87.9
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea HOM05D005119 ORTHO05D006338 3.6e-105 385.2 234 88.0
ECA240G4195 Erigeron canadensis HOM05D005119 ORTHO05D006338 3.6e-105 385.2 230 86.5
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea HOM05D005119 ORTHO05D006338 4.7e-105 384.8 234 88.0
Carub.0006s1937 Capsella rubella HOM05D005119 ORTHO05D006338 6.1e-105 384.4 234 86.8
Dinv05232 Davidia involucrata HOM05D005119 ORTHO05D006338 6.1e-105 384.4 229 86.9
Dinv25746 Davidia involucrata HOM05D005119 ORTHO05D006338 1.4e-104 383.3 232 86.6
C09p55010 Brassica napus HOM05D005119 ORTHO05D006338 2.3e-104 382.5 232 86.2
CANSAT54G2327 Cannabis sativa HOM05D005119 ORTHO05D006338 2.3e-104 382.5 232 86.2
Duzib170G0448 Durio zibethinus HOM05D005119 ORTHO05D006338 2.3e-104 382.5 233 87.6
Actinidia07012 Actinidia chinensis HOM05D005119 ORTHO05D006338 3.0e-104 382.1 230 87.8
AL6G32630 Arabidopsis lyrata HOM05D005119 ORTHO05D006338 3.0e-104 382.1 234 86.3
MELO3C015629.2 Cucumis melo HOM05D005119 ORTHO05D006338 3.0e-104 382.1 232 85.8
SGA_v2.0_scaffold16G07568 Striga asiatica HOM05D005119 ORTHO05D006338 3.0e-104 382.1 230 87.0
Aa31LG1G13700 Aethionema arabicum HOM05D005119 ORTHO05D006338 4.0e-104 381.7 232 86.2
A10p19000 Brassica napus HOM05D005119 ORTHO05D006338 4.0e-104 381.7 232 86.2
BraA10t43978Z Brassica rapa HOM05D005119 ORTHO05D006338 4.0e-104 381.7 232 86.2
PGR102G2321 Punica granatum HOM05D005119 ORTHO05D006338 4.0e-104 381.7 232 86.2
PSO339G0009 Papaver somniferum HOM05D005119 ORTHO05D006338 5.2e-104 381.3 232 84.5
Sopen11g029200 Solanum pennellii HOM05D005119 ORTHO05D006338 6.8e-104 380.9 229 87.3
PGSC0003DMG400018703 Solanum tuberosum HOM05D005119 ORTHO05D006338 6.8e-104 380.9 229 87.3
EL10Ac7g16218 Beta vulgaris HOM05D005119 ORTHO05D006338 8.8e-104 380.6 232 86.6
FAN21G1454 Fragaria x ananassa HOM05D005119 ORTHO05D006338 8.8e-104 380.6 232 86.6
Migut.N02419 Erythranthe guttata HOM05D005119 ORTHO05D006338 1.2e-103 380.2 230 87.0
Lj2A941G6 Lonicera japonica HOM05D005119 ORTHO05D006338 1.2e-103 380.2 229 87.3
BolC9t58364H Brassica oleracea HOM05D005119 ORTHO05D006338 1.5e-103 379.8 232 85.8
FAN21G3401 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.5e-103 379.8 232 86.2
HanXRQChr13g0420891 Helianthus annuus HOM05D005119 ORTHO05D006338 1.5e-103 379.8 226 87.2
Potri.009G158800 Populus trichocarpa HOM05D005119 ORTHO05D006338 2.0e-103 379.4 232 87.1
Thecc.09G337400 Theobroma cacao HOM05D005119 ORTHO05D006338 2.0e-103 379.4 233 86.3
unitig_27.g25021 Utricularia gibba HOM05D005119 ORTHO05D006338 2.0e-103 379.4 230 86.1
Cc01_g07550 Coffea canephora HOM05D005119 ORTHO05D006338 2.6e-103 379.0 230 86.1
Gohir.D08G008500 Gossypium hirsutum HOM05D005119 ORTHO05D006338 2.6e-103 379.0 233 86.3
Gorai.004G001700 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.6e-103 379.0 233 86.3
Peaxi162Scf00217g00811 Petunia axillaris HOM05D005119 ORTHO05D006338 2.6e-103 379.0 229 86.9
CAN.G864.4 Capsicum annuum HOM05D005119 ORTHO05D006338 3.4e-103 378.6 229 86.9
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 3.4e-103 378.6 228 86.8
Oeu026660.1 Olea europaea HOM05D005119 ORTHO05D006338 3.4e-103 378.6 230 85.2
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla HOM05D005119 ORTHO05D006338 4.4e-103 378.3 232 86.6
Potri.004G196600 Populus trichocarpa HOM05D005119 ORTHO05D006338 4.4e-103 378.3 232 85.3
CARHR191800 Cardamine hirsuta HOM05D005119 ORTHO05D006338 5.7e-103 377.9 234 85.9
Thhalv10014597m.g Eutrema salsugineum HOM05D005119 ORTHO05D006338 5.7e-103 377.9 234 85.5
BcaB08g36485 Brassica carinata HOM05D005119 ORTHO05D006338 7.5e-103 377.5 232 85.8
TAR636G0794 Trochodendron aralioides HOM05D005119 ORTHO05D006338 7.5e-103 377.5 228 86.4
GSVIVG01037452001 Vitis vinifera HOM05D005119 ORTHO05D006338 7.5e-103 377.5 232 86.2
Ciclev10016530m.g Citrus clementina HOM05D005119 ORTHO05D006338 9.8e-103 377.1 232 86.2
Sp6g23450 Schrenkiella parvula HOM05D005119 ORTHO05D006338 9.8e-103 377.1 232 85.8
Nitab4.5_0010431g0020 Nicotiana tabacum HOM05D005119 ORTHO05D006338 1.3e-102 376.7 229 86.0
vmacro04109 Vaccinium macrocarpon HOM05D005119 ORTHO05D006338 1.3e-102 376.7 235 83.8
PSO384G4010 Papaver somniferum HOM05D005119 ORTHO05D006338 1.7e-102 376.3 232 83.6
BcaB05g22789 Brassica carinata HOM05D005119 ORTHO05D006338 2.2e-102 375.9 232 86.2
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 2.2e-102 375.9 209 92.8
PGSC0003DMG400008707 Solanum tuberosum HOM05D005119 ORTHO05D006338 2.2e-102 375.9 229 86.9
Sopen01g004620 Solanum pennellii HOM05D005119 ORTHO05D006338 3.7e-102 375.2 231 85.7
BcaC03g13824 Brassica carinata HOM05D005119 ORTHO05D006338 4.8e-102 374.8 232 85.8
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus HOM05D005119 ORTHO05D006338 6.3e-102 374.4 232 85.8
C02p10590 Brassica napus HOM05D005119 ORTHO05D006338 6.3e-102 374.4 232 85.8
BraA02t05611Z Brassica rapa HOM05D005119 ORTHO05D006338 6.3e-102 374.4 232 85.8
MD11G1180800 Malus domestica HOM05D005119 ORTHO05D006338 6.3e-102 374.4 232 84.9
Sed0002058 Sechium edule HOM05D005119 ORTHO05D006338 8.3e-102 374.0 232 84.1
Duzib168G2211 Durio zibethinus HOM05D005119 ORTHO05D006338 1.1e-101 373.6 233 85.0
BolC2t07092H Brassica oleracea HOM05D005119 ORTHO05D006338 1.4e-101 373.2 232 85.3
QL01p020410 Quercus lobata HOM05D005119 ORTHO05D006338 1.8e-101 372.9 233 85.0
Manes.04G053600 Manihot esculenta HOM05D005119 ORTHO05D006338 3.1e-101 372.1 226 86.7
Sed0001894 Sechium edule HOM05D005119 ORTHO05D006338 5.4e-101 371.3 232 84.5
MSTRG.12410 Avicennia marina HOM05D005119 ORTHO05D006338 7.0e-101 370.9 230 84.3
ClCG03G014150 Citrullus lanatus HOM05D005119 ORTHO05D006338 7.0e-101 370.9 232 84.5
MBI13_g02397_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 1.2e-100 370.2 232 84.1
Manes.11G112200 Manihot esculenta HOM05D005119 ORTHO05D006338 1.6e-100 369.8 229 86.0
THA.LOC104799587 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 1.6e-100 369.8 222 84.7
Gorai.009G105100 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.0e-100 369.4 235 84.3
DCAR_002131 Daucus carota HOM05D005119 ORTHO05D006338 2.7e-100 369.0 228 84.6
Gohir.D05G101000 Gossypium hirsutum HOM05D005119 ORTHO05D006338 3.5e-100 368.6 235 83.8
Aqoxy2G00066 Aquilegia oxysepala HOM05D005119 ORTHO05D006338 5.9e-100 367.9 236 82.6
Hund18832 Selenicereus undatus HOM05D005119 ORTHO05D006338 5.9e-100 367.9 208 92.3
CsaV3_1G042110 Cucumis sativus L. HOM05D005119 ORTHO05D006338 7.7e-100 367.5 232 84.1
MSTRG.17662 Avicennia marina HOM05D005119 ORTHO05D006338 1.0e-99 367.1 207 91.3
THA.LOC104810964 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 1.3e-99 366.7 211 89.1
Gohir.A05G101200 Gossypium hirsutum HOM05D005119 ORTHO05D006338 2.3e-99 365.9 235 83.4
TWI75G0877 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 2.3e-99 365.9 232 84.1
FAN25G0803 Fragaria x ananassa HOM05D005119 ORTHO05D006338 2.9e-99 365.5 259 77.2
Nitab4.5_0001183g0030 Nicotiana tabacum HOM05D005119 ORTHO05D006338 2.9e-99 365.5 218 87.6
MBI19_g28105_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 5.0e-99 364.8 228 83.3
TWI79G0087 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 6.5e-99 364.4 232 83.2
Sc21g0006500 Simmondsia chinensis HOM05D005119 ORTHO05D006338 1.1e-98 363.6 227 84.6
Sabra04G0133300 Salix brachista HOM05D005119 ORTHO05D006338 1.5e-98 363.2 233 82.0
Lsat_1_v5_gn_3_116100 Lactuca sativa HOM05D005119 ORTHO05D006338 7.2e-98 360.9 203 90.1
SEGI_02516 Sequoiadendron giganteum HOM05D005119 ORTHO05D006338 7.2e-98 360.9 209 87.1
AUR62001614 Chenopodium quinoa HOM05D005119 ORTHO05D006338 9.5e-98 360.5 231 83.1
Os01g0277700 Oryza sativa ssp. japonica HOM05D005119 ORTHO05D006338 8.0e-97 357.5 231 80.1
ATR0307G125 Amborella trichopoda HOM05D005119 ORTHO05D006338 1.0e-96 357.1 230 80.4
Zm00001eb128960 Zea mays HOM05D005119 ORTHO05D006338 2.3e-96 355.9 217 82.5
HPP92_006662 Vanilla planifolia HOM05D005119 ORTHO05D006338 9.8e-95 350.5 232 80.2
Oeu022226.2 Olea europaea HOM05D005119 ORTHO05D006338 1.1e-93 347.1 303 65.3
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 5.0e-91 338.2 233 78.5
SMO347G0469 Selaginella moellendorffii HOM05D005119 ORTHO05D006338 1.4e-88 330.1 212 79.2
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 1.8e-88 329.7 192 89.1
CDE07G1923 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 6.4e-86 321.2 218 76.1
Mapoly0024s0118 Marchantia polymorpha HOM05D005119 ORTHO05D006338 6.6e-83 311.2 207 77.8
Solyc11g071510.3 Solanum lycopersicum HOM05D005119 ORTHO05D006338 1.7e-78 296.6 195 82.6
Lj2C929T5 Lonicera japonica HOM05D005119 ORTHO05D006338 1.6e-76 290.0 182 85.2
Pp3c19_11640 Physcomitrium patens HOM05D005119 ORTHO05D006338 4.6e-76 288.5 222 71.6
Haze_23668 Corylus avellana HOM05D005119 ORTHO05D006338 1.3e-75 287.0 194 82.0
TAR369G0017 Trochodendron aralioides HOM05D005119 ORTHO05D006338 1.1e-74 283.9 158 93.0
FvH4_3g27140 Fragaria vesca HOM05D005119 ORTHO05D006338 1.2e-73 280.4 158 91.8
Gohir.A08G000076 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.2e-73 280.4 161 90.7
CiPaw.14G091700 Carya illinoinensis HOM05D005119 ORTHO05D006338 1.6e-73 280.0 158 93.0
Nn7g37297 Nelumbo nucifera HOM05D005119 ORTHO05D006338 1.2e-71 273.9 179 79.9
DCAR_031602 Daucus carota HOM05D005119 ORTHO05D006338 1.5e-71 273.5 166 86.7
AagrBONN_evm.TU.Sc2ySwM_228.3807 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.0e-71 273.1 186 77.4
SGA_v2.0_scaffold79G25507 Striga asiatica HOM05D005119 ORTHO05D006338 2.0e-71 273.1 157 90.4
Cpa.g.sc103.65 Carica papaya HOM05D005119 ORTHO05D006338 3.7e-70 268.9 162 87.0
CDE08G0206 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 4.6e-68 261.9 185 74.6
CDE04G1732 Ceratophyllum demersum HOM05D005119 ORTHO05D001779 1.1e-61 240.7 160 79.4
AUR62020163 Chenopodium quinoa HOM05D005119 ORTHO05D006338 2.2e-54 216.5 124 90.3
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 2.7e-52 209.5 161 72.7
Gorai.006G031100 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.3e-43 180.6 110 88.2
EL10Ac6g14714 Beta vulgaris HOM05D005119 ORTHO05D006338 3.9e-43 179.1 101 92.1
Solyc01g009145.1 Solanum lycopersicum HOM05D005119 ORTHO05D006338 2.5e-42 176.4 103 89.3
Gohir.D11G235450 Gossypium hirsutum HOM05D005119 ORTHO05D006338 5.1e-35 152.1 158 55.1
Gorai.004G093900 Gossypium raimondii HOM05D005119 ORTHO05D006338 4.8e-33 145.6 88 88.6
AagrBONN_evm.TU.Sc2ySwM_368.775 Anthoceros agrestis HOM05D005119 ORTHO05D006338 2.9e-30 136.3 79 83.5
PRCOL_00002764 Prasinoderma coloniale HOM05D005119 ORTHO05D006338 2.8e-25 119.8 206 37.9
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea HOM05D005119 ORTHO05D006338 6.9e-24 115.2 81 80.2
Actinidia37188 Actinidia chinensis HOM05D005119 ORTHO05D006338 2.2e-22 110.2 57 91.2
RcHm_v2.0_Chr5g0049771 Rosa chinensis HOM05D005119 ORTHO05D006338 5.7e-18 95.5 65 75.4
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 3.1e-16 89.7 66 71.2
SHI25369 Sapria himalayana HOM05D005119 ORTHO05D006338 1.2e-15 87.8 65 66.2
Dinv01011 Davidia involucrata HOM05D005119 ORTHO05D006338 8.8e-11 71.6 50 72.0


User provided reference genes

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