Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g021120 Pisum sativum HOM05D004791 ORTHO05D005637 6.7e-96 354.0 175 100.0
Medtr5g088337 Medicago truncatula HOM05D004791 ORTHO05D005637 5.3e-77 291.2 170 84.7
Ca_06167_v3 Cicer arietinum L. HOM05D004791 ORTHO05D005637 1.6e-73 279.6 172 83.7
Ca_06184_v3 Cicer arietinum L. HOM05D004791 ORTHO05D005637 1.6e-73 279.6 172 83.7
LjContig00564g0026958 Lotus japonicus HOM05D004791 ORTHO05D005637 1.2e-68 263.5 178 77.0
TPR.G27619 Trifolium pratense HOM05D004791 ORTHO05D005637 3.3e-63 245.4 146 84.2
arahy.Tifrunner.gnm1.ann1.7GTL8A Arachis hypogaea HOM05D004791 ORTHO05D005637 1.3e-62 243.4 202 65.3
Lalb_Chr04g0249541 Lupinus albus HOM05D004791 ORTHO05D005637 8.2e-62 240.7 173 71.1
Glyma.02G275700 Glycine max HOM05D004791 ORTHO05D005637 1.1e-61 240.4 175 72.6
Lalb_Chr04g0249551 Lupinus albus HOM05D004791 ORTHO05D005637 1.4e-61 240.0 173 71.1
Glyma.14G040400 Glycine max HOM05D004791 ORTHO05D005637 2.4e-61 239.2 173 72.3
arahy.Tifrunner.gnm1.ann1.FGXA9Q Arachis hypogaea HOM05D004791 ORTHO05D005637 1.6e-60 236.5 202 64.4
GSVIVG01037421001 Vitis vinifera HOM05D004791 ORTHO05D005637 1.7e-59 233.0 179 68.2
Cfa010279 Carpinus fangiana HOM05D004791 ORTHO05D005637 2.5e-58 229.2 184 65.2
CANSAT54G2396 Cannabis sativa HOM05D004791 ORTHO05D005637 5.5e-58 228.0 191 61.8
MD02G1268200 Malus domestica HOM05D004791 ORTHO05D005637 5.5e-58 228.0 182 67.0
Manes.05G196500 Manihot esculenta HOM05D004791 ORTHO05D005637 5.5e-58 228.0 189 61.4
VMungo0647G0403 Vigna mungo HOM05D004791 ORTHO05D005637 1.6e-57 226.5 173 68.8
TAR633G0334 Trochodendron aralioides HOM05D004791 ORTHO05D005637 3.6e-57 225.3 188 62.8
Eucgr.B03774 Eucalyptus grandis HOM05D004791 ORTHO05D005637 6.1e-57 224.6 184 63.6
Gorai.004G001600 Gossypium raimondii HOM05D004791 ORTHO05D005637 6.1e-57 224.6 174 67.2
Lsat_1_v5_gn_5_176000 Lactuca sativa HOM05D004791 ORTHO05D005637 8.0e-57 224.2 182 64.8
PGR102G1910 Punica granatum HOM05D004791 ORTHO05D005637 8.0e-57 224.2 188 62.8
Gohir.A08G000072 Gossypium hirsutum HOM05D004791 ORTHO05D005637 1.0e-56 223.8 174 67.2
Gohir.D08G008400 Gossypium hirsutum HOM05D004791 ORTHO05D005637 1.8e-56 223.0 174 66.7
Phvul.008G205900 Phaseolus vulgaris HOM05D004791 ORTHO05D005637 1.8e-56 223.0 172 66.3
Nitab4.5_0000539g0030 Nicotiana tabacum HOM05D004791 ORTHO05D005637 2.3e-56 222.6 175 63.4
Prupe.2G053500 Prunus persica HOM05D004791 ORTHO05D005637 2.3e-56 222.6 183 65.0
RcHm_v2.0_Chr5g0050091 Rosa chinensis HOM05D004791 ORTHO05D005637 3.0e-56 222.2 170 66.5
SalBow6G3468 Salvia bowleyana HOM05D004791 ORTHO05D005637 4.0e-56 221.9 182 61.5
Hund25111 Selenicereus undatus HOM05D004791 ORTHO05D005637 4.0e-56 221.9 176 66.5
Gohir.D13G235800 Gossypium hirsutum HOM05D004791 ORTHO05D005637 5.2e-56 221.5 171 66.7
SGA_v2.0_scaffold158G37484 Striga asiatica HOM05D004791 ORTHO05D005637 5.2e-56 221.5 171 63.7
AUR62002934 Chenopodium quinoa HOM05D004791 ORTHO05D005637 6.8e-56 221.1 180 62.2
Potri.001G222300 Populus trichocarpa HOM05D004791 ORTHO05D005637 8.8e-56 220.7 180 62.8
HanXRQChr01g0013701 Helianthus annuus HOM05D004791 ORTHO05D005637 1.2e-55 220.3 170 64.1
MD07G1051600 Malus domestica HOM05D004791 ORTHO05D005637 1.2e-55 220.3 181 61.9
Atru.chr3.2946 Acer truncatum HOM05D004791 ORTHO05D005637 1.5e-55 219.9 173 63.6
Gohir.A13G230300 Gossypium hirsutum HOM05D004791 ORTHO05D005637 2.0e-55 219.5 182 63.2
FvH4_3g27591 Fragaria vesca HOM05D004791 ORTHO05D005637 2.6e-55 219.2 171 68.4
CSS0048046 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 5.7e-55 218.0 169 63.3
Gorai.013G266500 Gossypium raimondii HOM05D004791 ORTHO05D005637 5.7e-55 218.0 183 62.3
CSS0026131 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 7.5e-55 217.6 177 62.1
CSS0033533 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 7.5e-55 217.6 177 62.1
Aqoxy2G04139 Aquilegia oxysepala HOM05D004791 ORTHO05D005637 9.8e-55 217.2 180 63.3
AUR62007743 Chenopodium quinoa HOM05D004791 ORTHO05D005637 2.2e-54 216.1 181 61.9
MBI06_g07515_MAGBIO Magnolia biondii HOM05D004791 ORTHO05D005637 2.8e-54 215.7 185 59.5
ClCG02G024120 Citrullus lanatus HOM05D004791 ORTHO05D005637 3.7e-54 215.3 184 62.5
SGA_v2.0_scaffold8G04482 Striga asiatica HOM05D004791 ORTHO05D005637 3.7e-54 215.3 170 61.2
CsaV3_4G023210 Cucumis sativus L. HOM05D004791 ORTHO05D005637 6.3e-54 214.5 184 62.5
Sc15g0007330 Simmondsia chinensis HOM05D004791 ORTHO05D005637 6.3e-54 214.5 178 63.5
THA.LOC104816959 Tarenaya hassleriana HOM05D004791 ORTHO05D005637 6.3e-54 214.5 183 59.6
FAN16G2039 Fragaria x ananassa HOM05D004791 ORTHO05D005637 8.3e-54 214.2 171 66.1
CSS0048448 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 1.4e-53 213.4 184 62.0
ECA248G0040 Erigeron canadensis HOM05D004791 ORTHO05D005637 1.4e-53 213.4 169 65.1
Duzib170G0202 Durio zibethinus HOM05D004791 ORTHO05D005637 1.8e-53 213.0 185 62.2
Peaxi162Scf00390g00128 Petunia axillaris HOM05D004791 ORTHO05D005637 1.8e-53 213.0 180 61.7
Hma1.2p1_1631F.1_g294630 Hydrangea macrophylla HOM05D004791 ORTHO05D005637 3.1e-53 212.2 186 58.6
Thecc.09G339600 Theobroma cacao HOM05D004791 ORTHO05D005637 5.4e-53 211.5 181 60.8
PGSC0003DMG400027664 Solanum tuberosum HOM05D004791 ORTHO05D005637 1.2e-52 210.3 171 64.9
PSO732G0764 Papaver somniferum HOM05D004791 ORTHO05D005637 1.6e-52 209.9 182 61.0
Solyc06g082810.3 Solanum lycopersicum HOM05D004791 ORTHO05D005637 1.6e-52 209.9 171 64.9
Sed0001715 Sechium edule HOM05D004791 ORTHO05D005637 2.7e-52 209.1 183 59.0
Nitab4.5_0004383g0040 Nicotiana tabacum HOM05D004791 ORTHO05D005637 3.5e-52 208.8 159 65.4
Sopen06g034170 Solanum pennellii HOM05D004791 ORTHO05D005637 4.5e-52 208.4 171 64.9
Ciclev10016367m.g Citrus clementina HOM05D004791 ORTHO05D005637 5.9e-52 208.0 185 57.8
PSO675G0111 Papaver somniferum HOM05D004791 ORTHO05D005637 5.9e-52 208.0 179 61.5
TWI79G1652 Tripterygium wilfordii HOM05D004791 ORTHO05D005637 1.3e-51 206.8 149 69.1
MELO3C014695.2 Cucumis melo HOM05D004791 ORTHO05D005637 1.7e-51 206.5 181 61.9
DCAR_018598 Daucus carota HOM05D004791 ORTHO05D005637 2.2e-51 206.1 185 56.2
QL01p007413 Quercus lobata HOM05D004791 ORTHO05D005637 2.2e-51 206.1 149 71.8
CAN.G874.52 Capsicum annuum HOM05D004791 ORTHO05D005637 2.9e-51 205.7 171 62.6
Lsat_1_v5_gn_9_15660 Lactuca sativa HOM05D004791 ORTHO05D005637 2.9e-51 205.7 177 58.2
THA.LOC104800478 Tarenaya hassleriana HOM05D004791 ORTHO05D005637 5.0e-51 204.9 143 72.0
vmacro14664 Vaccinium macrocarpon HOM05D004791 ORTHO05D005637 5.0e-51 204.9 181 58.6
Nitab4.5_0008751g0050 Nicotiana tabacum HOM05D004791 ORTHO05D005637 6.5e-51 204.5 180 60.6
Migut.D00780 Erythranthe guttata HOM05D004791 ORTHO05D005637 8.5e-51 204.1 181 59.1
Thhalv10002092m.g Eutrema salsugineum HOM05D004791 ORTHO05D005637 8.5e-51 204.1 171 61.4
AL4G20260 Arabidopsis lyrata HOM05D004791 ORTHO05D005637 1.1e-50 203.8 169 60.9
Sp4g08380 Schrenkiella parvula HOM05D004791 ORTHO05D005637 1.1e-50 203.8 175 60.0
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 1.5e-50 203.4 172 59.3
Carub.0004s0745 Capsella rubella HOM05D004791 ORTHO05D005637 2.5e-50 202.6 169 57.4
BcaB01g01998 Brassica carinata HOM05D004791 ORTHO05D005637 3.2e-50 202.2 168 61.9
CiPaw.13G121900 Carya illinoinensis HOM05D004791 ORTHO05D005637 3.2e-50 202.2 134 74.6
vmacro02852 Vaccinium macrocarpon HOM05D004791 ORTHO05D005637 3.2e-50 202.2 200 54.0
EL10Ac6g14521 Beta vulgaris HOM05D004791 ORTHO05D005637 4.2e-50 201.8 178 56.7
COL.COLO4_18343 Corchorus olitorius HOM05D004791 ORTHO05D005637 5.5e-50 201.4 155 66.5
Dinv28770 Davidia involucrata HOM05D004791 ORTHO05D005637 5.5e-50 201.4 145 69.0
Migut.N00694 Erythranthe guttata HOM05D004791 ORTHO05D005637 7.2e-50 201.1 169 56.2
C09p02320 Brassica napus HOM05D004791 ORTHO05D005637 9.4e-50 200.7 168 60.1
Aa31LG5G8380 Aethionema arabicum HOM05D004791 ORTHO05D005637 3.6e-49 198.7 171 61.4
BraA09t35872Z Brassica rapa HOM05D004791 ORTHO05D005637 4.7e-49 198.4 166 62.0
ATR0661G342 Amborella trichopoda HOM05D004791 ORTHO05D005637 6.1e-49 198.0 184 55.4
CARHR119150 Cardamine hirsuta HOM05D004791 ORTHO05D005637 8.0e-49 197.6 169 58.6
BcaC04g24019 Brassica carinata HOM05D004791 ORTHO05D005637 1.0e-48 197.2 168 61.9
BolC9t53160H Brassica oleracea HOM05D004791 ORTHO05D005637 1.0e-48 197.2 168 61.9
CDE09G0384 Ceratophyllum demersum HOM05D004791 ORTHO05D005637 1.0e-48 197.2 184 54.9
A09p02230 Brassica napus HOM05D004791 ORTHO05D005637 1.4e-48 196.8 166 61.4
CDE08G0165 Ceratophyllum demersum HOM05D004791 ORTHO05D005637 1.8e-48 196.4 184 55.4
Sopen09g012370 Solanum pennellii HOM05D004791 ORTHO05D005637 2.3e-48 196.1 182 56.0
Nitab4.5_0001348g0240 Nicotiana tabacum HOM05D004791 ORTHO05D005637 8.8e-48 194.1 180 58.3
AT2G26970 Arabidopsis thaliana HOM05D004791 ORTHO05D005637 9.8e-47 190.7 169 57.4
Nitab4.5_0000105g0450 Nicotiana tabacum HOM05D004791 ORTHO05D005637 3.7e-46 188.7 190 55.3
Zm00001eb240820 Zea mays HOM05D004791 ORTHO05D005637 6.3e-46 188.0 184 53.3
Os02g0465500 Oryza sativa ssp. japonica HOM05D004791 ORTHO05D005637 7.0e-45 184.5 178 53.9
SEGI_38815 Sequoiadendron giganteum HOM05D004791 ORTHO05D005637 6.6e-43 177.9 187 50.3
Prupe.2G051000 Prunus persica HOM05D004791 ORTHO05D005637 2.5e-42 176.0 101 84.2
Lj2A1108T30 Lonicera japonica HOM05D004791 ORTHO05D005637 4.2e-42 175.3 271 41.7
Haze_23696 Corylus avellana HOM05D004791 ORTHO05D005637 9.5e-42 174.1 188 52.7
Dinv00703 Davidia involucrata HOM05D004791 ORTHO05D005637 8.0e-41 171.0 164 54.3
Dinv18272 Davidia involucrata HOM05D004791 ORTHO05D005637 1.4e-40 170.2 154 55.8
Nn7g38012 Nelumbo nucifera HOM05D004791 ORTHO05D005637 2.3e-40 169.5 157 58.6
ECA247G3547 Erigeron canadensis HOM05D004791 ORTHO05D005637 3.0e-40 169.1 115 69.6
Cc01_g15680 Coffea canephora HOM05D004791 ORTHO05D005637 6.8e-40 167.9 102 74.5
HanXRQChr08g0230941 Helianthus annuus HOM05D004791 ORTHO05D005637 8.3e-38 161.0 115 65.2
FAN11G2354 Fragaria x ananassa HOM05D004791 ORTHO05D005637 1.8e-37 159.8 169 55.0
HanXRQChr08g0230971 Helianthus annuus HOM05D004791 ORTHO05D005637 1.8e-37 159.8 118 63.6
Solyc09g018760.2 Solanum lycopersicum HOM05D004791 ORTHO05D005637 4.1e-37 158.7 140 55.7
SEGI_08759 Sequoiadendron giganteum HOM05D004791 ORTHO05D005637 4.6e-36 155.2 146 52.7
Mapoly0089s0044 Marchantia polymorpha HOM05D004791 ORTHO05D005637 7.8e-36 154.5 170 48.8
Pp3c15_14440 Physcomitrium patens HOM05D004791 ORTHO05D005637 1.0e-35 154.1 185 46.5
SMO361G0388 Selaginella moellendorffii HOM05D004791 ORTHO05D005637 1.3e-35 153.7 176 50.0
HPP92_004836 Vanilla planifolia HOM05D004791 ORTHO05D005637 5.8e-31 138.3 111 62.2
Duzib168G2260 Durio zibethinus HOM05D004791 ORTHO05D005637 3.7e-30 135.6 99 64.6
Rhsim11G0123600 Rhododendron simsii HOM05D004791 ORTHO05D005637 6.4e-30 134.8 183 47.5
PRCOL_00004118 Prasinoderma coloniale HOM05D004791 ORTHO05D005637 1.9e-29 133.3 112 54.5
Pp3c9_12520 Physcomitrium patens HOM05D004791 ORTHO05D005637 1.6e-28 130.2 114 52.6
Cre10.g425800 Chlamydomonas reinhardtii HOM05D004791 ORTHO05D005637 3.5e-28 129.0 163 42.3
Peaxi162Scf00293g00320 Petunia axillaris HOM05D004791 ORTHO05D005637 1.0e-27 127.5 76 73.7
HPP92_004833 Vanilla planifolia HOM05D004791 ORTHO05D005637 2.5e-26 122.9 102 59.8
Cfa021416 Carpinus fangiana HOM05D004791 ORTHO05D005637 4.4e-23 112.1 113 47.8
HanXRQChr08g0230891 Helianthus annuus HOM05D004791 ORTHO05D005637 2.9e-22 109.4 66 72.7
HanXRQChr08g0230961 Helianthus annuus HOM05D004791 ORTHO05D005637 4.9e-22 108.6 67 71.6
Rhsim13G0056300 Rhododendron simsii HOM05D004791 ORTHO05D005637 8.3e-22 107.8 104 53.8
Peaxi162Scf01280g00024 Petunia axillaris HOM05D004791 ORTHO05D005637 5.6e-18 95.1 118 50.0
Gohir.D04G099150 Gossypium hirsutum HOM05D004791 ORTHO05D005637 2.6e-15 86.3 88 54.5
Gorai.013G056800 Gossypium raimondii HOM05D004791 ORTHO05D005637 1.3e-14 84.0 91 54.9
Os04g0303950 Oryza sativa ssp. japonica HOM05D004791 ORTHO05D005637 1.1e-13 80.9 105 45.7
Lalb_Chr04g0249561 Lupinus albus HOM05D004791 ORTHO05D005637 3.9e-11 72.4 48 72.9
C03p32150 Brassica napus HOM05D004791 ORTHO05D005637 8.1e-09 64.7 43 60.5
BolC3t15557H Brassica oleracea HOM05D004791 ORTHO05D005637 8.1e-09 64.7 43 60.5
TPR.G11322 Trifolium pratense HOM05D004791 ORTHO05D005637 3.1e-08 62.8 31 87.1
BolC9t53165H Brassica oleracea HOM05D004791 ORTHO05D005637 2.6e-07 59.7 72 47.2
Cpa.g.sc34.213 Carica papaya HOM05D004791 ORTHO05D005637 2.2e-06 56.6 34 76.5


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