Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 4.6e-103 377.9 188 100.0
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 1.9e-80 302.8 181 81.8
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 9.4e-80 300.4 175 84.0
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 1.8e-75 286.2 187 73.3
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 2.4e-75 285.8 187 73.8
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 2.4e-75 285.8 187 74.3
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 5.3e-75 284.6 190 75.3
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 2.7e-71 272.3 187 72.2
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 6.8e-70 267.7 187 70.6
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 8.0e-63 244.2 183 66.7
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 1.8e-62 243.0 190 62.6
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 6.8e-62 241.1 199 60.8
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 1.5e-61 240.0 193 62.2
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 2.6e-61 239.2 195 60.0
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 2.6e-61 239.2 188 63.3
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 4.4e-61 238.4 188 63.3
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 4.4e-61 238.4 186 64.0
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 9.8e-61 237.3 184 64.1
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 2.8e-60 235.7 192 60.9
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 6.3e-60 234.6 186 62.9
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 2.4e-59 232.6 179 63.7
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 4.1e-59 231.9 186 63.4
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 5.4e-59 231.5 197 59.4
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 4.5e-58 228.4 185 62.7
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 7.8e-58 227.6 180 61.1
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 2.9e-57 225.7 202 57.9
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 3.8e-57 225.3 180 61.1
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 6.6e-57 224.6 185 60.5
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 6.6e-57 224.6 182 62.1
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 1.5e-56 223.4 180 60.6
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 2.5e-56 222.6 182 60.4
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 3.3e-56 222.2 189 58.2
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 9.5e-56 220.7 181 60.2
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 1.6e-55 219.9 181 60.2
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 4.7e-55 218.4 179 59.8
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 6.1e-55 218.0 181 59.1
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 6.1e-55 218.0 181 59.1
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 8.0e-55 217.6 181 60.8
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 8.0e-55 217.6 184 61.4
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 1.8e-54 216.5 185 59.5
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 2.3e-54 216.1 177 58.8
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 2.3e-54 216.1 180 60.6
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 4.0e-54 215.3 180 60.6
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 8.9e-54 214.2 178 61.8
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 8.9e-54 214.2 190 60.0
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 1.2e-53 213.8 190 56.8
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 1.2e-53 213.8 188 56.9
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 2.0e-53 213.0 180 56.1
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 2.6e-53 212.6 161 62.7
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 3.4e-53 212.2 185 56.2
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 5.7e-53 211.5 188 57.4
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 7.5e-53 211.1 181 58.0
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.9e-52 209.1 180 59.4
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 6.4e-52 208.0 185 59.5
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 8.3e-52 207.6 186 58.6
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 8.3e-52 207.6 163 62.6
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 8.3e-52 207.6 183 57.4
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 1.8e-51 206.5 184 58.2
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 2.4e-51 206.1 176 59.1
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 9.2e-51 204.1 181 58.6
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.7e-50 202.6 180 57.2
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 5.9e-50 201.4 169 60.4
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 7.8e-50 201.1 190 55.3
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 1.0e-49 200.7 188 52.1
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 2.3e-49 199.5 189 52.9
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 3.9e-49 198.7 167 62.9
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 3.9e-49 198.7 186 53.8
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 5.0e-49 198.4 180 51.7
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 2.5e-48 196.1 187 56.7
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 3.6e-47 192.2 185 53.0
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 1.5e-45 186.8 193 49.2
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 1.9e-43 179.9 175 53.1
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 3.0e-41 172.6 175 49.7
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.5e-34 149.1 162 51.2
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 3.5e-34 149.1 184 47.3
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 1.1e-32 144.1 203 40.4
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 5.6e-32 141.7 242 35.5
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 1.5e-29 133.7 180 43.3
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.4e-29 132.5 191 42.4
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.4e-29 132.5 181 42.5
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.8e-28 129.0 182 43.4
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 1.4e-27 127.1 190 38.4
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 2.7e-26 122.9 88 64.8
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 2.7e-26 122.9 219 35.6
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 6.0e-26 121.7 96 62.5
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 3.0e-25 119.4 131 44.3
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.1e-22 110.9 192 37.0
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.4e-22 109.8 124 47.6
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 3.1e-22 109.4 181 38.7
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.4e-21 105.9 193 35.2
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 9.9e-21 104.4 187 33.7
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.9e-20 102.1 167 37.7
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.4e-19 99.8 178 36.0
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.2e-19 99.0 172 36.0
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.8e-18 94.7 130 45.4
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 2.5e-16 89.7 84 56.0
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.4e-11 73.9 92 45.7
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 2.4e-11 73.2 118 38.1
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.2e-11 72.4 76 51.3
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 4.2e-11 72.4 115 35.7
COL.COLO4_13576 Corchorus olitorius HOM05D007512 ORTHO05D020513 1.6e-10 70.5 110 39.1
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 8.7e-09 64.7 116 33.6
Potri.001G044601 Populus trichocarpa HOM05D007512 ORTHO05D009524 9.0e-06 54.7 115 32.2


User provided reference genes

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