Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g015440 Pisum sativum HOM05D003973 ORTHO05D004679 6.9e-131 470.7 245 100.0
Psat6g055320 Pisum sativum HOM05D003973 ORTHO05D004679 3.5e-42 176.0 172 62.2
arahy.Tifrunner.gnm1.ann1.0L9E2L Arachis hypogaea HOM05D003973 ORTHO05D004679 1.1e-38 164.5 187 54.0
arahy.Tifrunner.gnm1.ann1.M1CRL2 Arachis hypogaea HOM05D003973 ORTHO05D004679 1.1e-38 164.5 187 54.0
Lj1g0003934 Lotus japonicus HOM05D003973 ORTHO05D004679 6.8e-38 161.8 187 52.4
Ca_09689_v3 Cicer arietinum L. HOM05D003973 ORTHO05D004679 8.9e-38 161.4 180 55.0
CANSAT01G0525 Cannabis sativa HOM05D003973 ORTHO05D004679 1.5e-37 160.6 197 51.3
Eucgr.B01536 Eucalyptus grandis HOM05D003973 ORTHO05D004679 1.5e-37 160.6 197 50.8
TPR.G3551 Trifolium pratense HOM05D003973 ORTHO05D004679 2.6e-37 159.8 182 57.1
Ciclev10018809m.g Citrus clementina HOM05D003973 ORTHO05D004679 3.4e-37 159.5 190 53.2
Medtr1g070160 Medicago truncatula HOM05D003973 ORTHO05D004679 3.4e-37 159.5 183 57.4
Dinv22416 Davidia involucrata HOM05D003973 ORTHO05D004679 4.4e-37 159.1 190 52.6
CSS0019197 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 7.5e-37 158.3 198 50.0
Phvul.001G159900 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 7.5e-37 158.3 190 52.6
Psat3g058480 Pisum sativum HOM05D003973 ORTHO05D004679 7.5e-37 158.3 187 51.3
Glyma.10G035800 Glycine max HOM05D003973 ORTHO05D004679 9.8e-37 157.9 189 52.9
RcHm_v2.0_Chr6g0288391 Rosa chinensis HOM05D003973 ORTHO05D004679 9.8e-37 157.9 189 51.9
Potri.005G222800 Populus trichocarpa HOM05D003973 ORTHO05D004679 1.3e-36 157.5 190 51.6
VMungo1383G0117 Vigna mungo HOM05D003973 ORTHO05D004679 1.3e-36 157.5 198 50.0
Cpa.g.sc50.33 Carica papaya HOM05D003973 ORTHO05D004679 1.7e-36 157.1 190 52.6
MD05G1199600 Malus domestica HOM05D003973 ORTHO05D004679 2.9e-36 156.4 219 47.5
Sabra05G0171500 Salix brachista HOM05D003973 ORTHO05D004679 2.9e-36 156.4 190 51.6
Duzib211G0218 Durio zibethinus HOM05D003973 ORTHO05D004679 3.7e-36 156.0 197 48.7
Hma1.2p1_0621F.1_g190820 Hydrangea macrophylla HOM05D003973 ORTHO05D004679 3.7e-36 156.0 193 50.8
Sabra02G0032000 Salix brachista HOM05D003973 ORTHO05D004679 3.7e-36 156.0 187 50.8
Manes.12G031400 Manihot esculenta HOM05D003973 ORTHO05D004679 4.9e-36 155.6 190 51.6
arahy.Tifrunner.gnm1.ann1.61T5XF Arachis hypogaea HOM05D003973 ORTHO05D004679 6.4e-36 155.2 187 50.8
arahy.Tifrunner.gnm1.ann1.B4WKJK Arachis hypogaea HOM05D003973 ORTHO05D004679 6.4e-36 155.2 187 50.8
Dinv34610 Davidia involucrata HOM05D003973 ORTHO05D004679 6.4e-36 155.2 190 51.6
Lj5g0017930 Lotus japonicus HOM05D003973 ORTHO05D004679 6.4e-36 155.2 182 56.0
Potri.002G039900 Populus trichocarpa HOM05D003973 ORTHO05D004679 8.3e-36 154.8 190 51.6
Atru.chr5.1648 Acer truncatum HOM05D003973 ORTHO05D004679 1.1e-35 154.5 197 48.7
Actinidia12891 Actinidia chinensis HOM05D003973 ORTHO05D004679 1.1e-35 154.5 182 53.3
Glyma.13G122200 Glycine max HOM05D003973 ORTHO05D004679 1.1e-35 154.5 189 51.9
Gohir.A08G060000 Gossypium hirsutum HOM05D003973 ORTHO05D004679 1.1e-35 154.5 187 50.3
TPR.G16308 Trifolium pratense HOM05D003973 ORTHO05D004679 1.1e-35 154.5 190 50.5
FvH4_2g21710 Fragaria vesca HOM05D003973 ORTHO05D004679 1.4e-35 154.1 189 50.8
CiPaw.03G262600 Carya illinoinensis HOM05D003973 ORTHO05D004679 1.9e-35 153.7 189 50.8
Glyma.19G163500 Glycine max HOM05D003973 ORTHO05D004679 1.9e-35 153.7 198 49.0
Gohir.D11G135600 Gossypium hirsutum HOM05D003973 ORTHO05D004679 1.9e-35 153.7 197 49.2
Gorai.004G072800 Gossypium raimondii HOM05D003973 ORTHO05D004679 1.9e-35 153.7 180 51.7
CiPaw.04G185700 Carya illinoinensis HOM05D003973 ORTHO05D004679 2.4e-35 153.3 197 49.2
COL.COLO4_05173 Corchorus olitorius HOM05D003973 ORTHO05D004679 3.2e-35 152.9 197 48.7
DCAR_005697 Daucus carota HOM05D003973 ORTHO05D004679 3.2e-35 152.9 197 49.2
Lalb_Chr06g0170381 Lupinus albus HOM05D003973 ORTHO05D004679 3.2e-35 152.9 187 50.8
MD10G1185900 Malus domestica HOM05D003973 ORTHO05D004679 3.2e-35 152.9 190 50.5
PGSC0003DMG400031378 Solanum tuberosum HOM05D003973 ORTHO05D004679 3.2e-35 152.9 190 51.6
Glyma.03G162100 Glycine max HOM05D003973 ORTHO05D004679 4.1e-35 152.5 188 50.0
Medtr7g096680 Medicago truncatula HOM05D003973 ORTHO05D004679 4.1e-35 152.5 214 46.7
Thecc.01G260300 Theobroma cacao HOM05D003973 ORTHO05D004679 4.1e-35 152.5 197 48.7
FAN24G2194 Fragaria x ananassa HOM05D003973 ORTHO05D004679 5.4e-35 152.1 181 53.6
Cc11_g02590 Coffea canephora HOM05D003973 ORTHO05D004679 7.0e-35 151.8 182 52.7
QL09p038243 Quercus lobata HOM05D003973 ORTHO05D004679 9.2e-35 151.4 189 50.8
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 9.2e-35 151.4 182 51.6
CAN.G194.11 Capsicum annuum HOM05D003973 ORTHO05D004679 1.2e-34 151.0 190 51.6
TWI12G0927 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 1.2e-34 151.0 180 50.6
MELO3C012904.2 Cucumis melo HOM05D003973 ORTHO05D004679 1.6e-34 150.6 197 46.7
CsaV3_3G022520 Cucumis sativus L. HOM05D003973 ORTHO05D004679 1.6e-34 150.6 197 46.7
Gorai.007G145200 Gossypium raimondii HOM05D003973 ORTHO05D004679 1.6e-34 150.6 189 50.8
Lj1A65T50 Lonicera japonica HOM05D003973 ORTHO05D004679 1.6e-34 150.6 180 50.6
MBI17_g07970_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 1.6e-34 150.6 180 50.6
FAN20G1573 Fragaria x ananassa HOM05D003973 ORTHO05D004679 2.0e-34 150.2 179 52.0
Sopen04g003790 Solanum pennellii HOM05D003973 ORTHO05D004679 2.0e-34 150.2 190 51.1
TWI75G1776 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 2.0e-34 150.2 180 50.6
TAR362G0234 Trochodendron aralioides HOM05D003973 ORTHO05D004679 2.0e-34 150.2 179 52.0
MSTRG.18316 Avicennia marina HOM05D003973 ORTHO05D004679 2.7e-34 149.8 182 53.3
Lalb_Chr02g0152311 Lupinus albus HOM05D003973 ORTHO05D004679 2.7e-34 149.8 180 51.7
GSVIVG01028304001 Vitis vinifera HOM05D003973 ORTHO05D004679 2.7e-34 149.8 180 51.7
Gohir.A08G189300 Gossypium hirsutum HOM05D003973 ORTHO05D004679 3.5e-34 149.4 190 52.1
Gohir.A11G129900 Gossypium hirsutum HOM05D003973 ORTHO05D004679 3.5e-34 149.4 197 48.2
Gohir.D08G207800 Gossypium hirsutum HOM05D003973 ORTHO05D004679 3.5e-34 149.4 190 52.1
Peaxi162Scf00329g00811 Petunia axillaris HOM05D003973 ORTHO05D004679 3.5e-34 149.4 190 51.1
Nitab4.5_0000129g0340 Nicotiana tabacum HOM05D003973 ORTHO05D004679 6.0e-34 148.7 182 53.3
PGR044G1639 Punica granatum HOM05D003973 ORTHO05D004679 6.0e-34 148.7 186 51.6
TWI18G0068 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 6.0e-34 148.7 180 50.6
FAN15G1892 Fragaria x ananassa HOM05D003973 ORTHO05D004679 7.8e-34 148.3 179 51.4
Nn3g17035 Nelumbo nucifera HOM05D003973 ORTHO05D004679 7.8e-34 148.3 188 48.9
Oeu026512.1 Olea europaea HOM05D003973 ORTHO05D004679 7.8e-34 148.3 182 52.2
Solyc04g008630.3 Solanum lycopersicum HOM05D003973 ORTHO05D004679 7.8e-34 148.3 190 50.5
Sed0025131 Sechium edule HOM05D003973 ORTHO05D004679 1.0e-33 147.9 185 48.6
Nn4g22928 Nelumbo nucifera HOM05D003973 ORTHO05D004679 1.3e-33 147.5 190 47.4
SGA_v2.0_scaffold138G35249 Striga asiatica HOM05D003973 ORTHO05D004679 1.7e-33 147.1 190 49.5
DCAR_000939 Daucus carota HOM05D003973 ORTHO05D004679 2.3e-33 146.7 187 49.2
FAN27G0583 Fragaria x ananassa HOM05D003973 ORTHO05D004679 2.3e-33 146.7 179 51.4
SalBow4G2825 Salvia bowleyana HOM05D003973 ORTHO05D004679 2.3e-33 146.7 190 49.5
Rhsim13G0034000 Rhododendron simsii HOM05D003973 ORTHO05D004679 3.0e-33 146.4 190 48.9
Gorai.004G220200 Gossypium raimondii HOM05D003973 ORTHO05D004679 3.9e-33 146.0 187 48.1
Aa31LG5G5690 Aethionema arabicum HOM05D003973 ORTHO05D004679 5.0e-33 145.6 187 48.1
PSO063G1318 Papaver somniferum HOM05D003973 ORTHO05D004679 5.0e-33 145.6 190 47.4
PSO782G1372 Papaver somniferum HOM05D003973 ORTHO05D004679 5.0e-33 145.6 190 47.4
Nitab4.5_0001419g0010 Nicotiana tabacum HOM05D003973 ORTHO05D004679 6.6e-33 145.2 182 52.7
Sed0015853 Sechium edule HOM05D003973 ORTHO05D004679 8.6e-33 144.8 185 47.6
THA.LOC104800875 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 8.6e-33 144.8 180 50.0
Lsat_1_v5_gn_9_8721 Lactuca sativa HOM05D003973 ORTHO05D004679 1.1e-32 144.4 190 48.4
BraA04t17928Z Brassica rapa HOM05D003973 ORTHO05D004679 1.5e-32 144.1 187 47.1
ClCG07G000970 Citrullus lanatus HOM05D003973 ORTHO05D004679 1.5e-32 144.1 187 47.1
BcaB06g28436 Brassica carinata HOM05D003973 ORTHO05D004679 1.9e-32 143.7 187 47.1
Oeu039681.1 Olea europaea HOM05D003973 ORTHO05D004679 2.5e-32 143.3 182 50.5
C04p60770 Brassica napus HOM05D003973 ORTHO05D004679 3.3e-32 142.9 187 47.1
HanXRQChr10g0281061 Helianthus annuus HOM05D003973 ORTHO05D004679 3.3e-32 142.9 197 46.7
BcaB06g28520 Brassica carinata HOM05D003973 ORTHO05D004679 4.3e-32 142.5 187 46.5
A04p24090 Brassica napus HOM05D003973 ORTHO05D004679 4.3e-32 142.5 187 46.5
BolC4t27568H Brassica oleracea HOM05D003973 ORTHO05D004679 4.3e-32 142.5 187 46.5
Carub.0004s1253 Capsella rubella HOM05D003973 ORTHO05D004679 4.3e-32 142.5 188 47.3
Migut.D00414 Erythranthe guttata HOM05D003973 ORTHO05D004679 4.3e-32 142.5 182 51.1
BcaB02g10369 Brassica carinata HOM05D003973 ORTHO05D004679 5.6e-32 142.1 187 47.1
Ah.11g049650 Amaranthus hybridus HOM05D003973 ORTHO05D004679 9.5e-32 141.4 171 51.5
Aqoxy1G00848 Aquilegia oxysepala HOM05D003973 ORTHO05D004679 9.5e-32 141.4 197 45.2
CARHR124850 Cardamine hirsuta HOM05D003973 ORTHO05D004679 9.5e-32 141.4 188 47.3
Thhalv10016226m.g Eutrema salsugineum HOM05D003973 ORTHO05D004679 9.5e-32 141.4 187 47.1
TAR633G0700 Trochodendron aralioides HOM05D003973 ORTHO05D004679 9.5e-32 141.4 179 49.2
AL4G26480 Arabidopsis lyrata HOM05D003973 ORTHO05D004679 1.2e-31 141.0 188 47.3
AT2G31260 Arabidopsis thaliana HOM05D003973 ORTHO05D004679 1.2e-31 141.0 188 47.3
Haze_24609 Corylus avellana HOM05D003973 ORTHO05D004679 1.2e-31 141.0 229 42.4
ECA247G3763 Erigeron canadensis HOM05D003973 ORTHO05D004679 2.1e-31 140.2 180 48.3
Phvul.007G194300 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 2.8e-31 139.8 198 46.5
Sp4g13740 Schrenkiella parvula HOM05D003973 ORTHO05D004679 4.7e-31 139.0 187 46.0
THA.LOC104826212 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 4.7e-31 139.0 179 48.0
MBI18_g15332_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 1.1e-30 137.9 184 46.7
SHI09836 Sapria himalayana HOM05D003973 ORTHO05D004679 1.1e-30 137.9 260 37.3
HanXRQChr08g0217761 Helianthus annuus HOM05D003973 ORTHO05D004679 1.8e-30 137.1 183 49.2
Gohir.D08G069200 Gossypium hirsutum HOM05D003973 ORTHO05D004679 6.8e-30 135.2 171 49.1
HanXRQChr15g0467921 Helianthus annuus HOM05D003973 ORTHO05D004679 2.0e-29 133.7 180 46.1
CDE06G1379 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 3.7e-28 129.4 180 43.9
ECA236G2624 Erigeron canadensis HOM05D003973 ORTHO05D004679 6.4e-28 128.6 174 47.7
Duzib138G0375 Durio zibethinus HOM05D003973 ORTHO05D004679 5.4e-27 125.6 165 48.5
ATR0559G363 Amborella trichopoda HOM05D003973 ORTHO05D004679 7.1e-27 125.2 190 40.5
EL10Ac5g10415 Beta vulgaris HOM05D003973 ORTHO05D004679 7.1e-27 125.2 203 42.9
HPP92_008421 Vanilla planifolia HOM05D003973 ORTHO05D004679 1.6e-26 124.0 180 41.1
SEGI_30090 Sequoiadendron giganteum HOM05D003973 ORTHO05D004679 2.1e-26 123.6 180 41.1
HPP92_008425 Vanilla planifolia HOM05D003973 ORTHO05D004679 2.1e-26 123.6 180 41.1
vmacro02653 Vaccinium macrocarpon HOM05D003973 ORTHO05D004679 3.5e-26 122.9 182 47.8
Os03g0248000 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 6.0e-26 122.1 198 39.4
Zm00001eb010620 Zea mays HOM05D003973 ORTHO05D004679 3.9e-25 119.4 196 40.3
ATR0680G230 Amborella trichopoda HOM05D003973 ORTHO05D004679 5.1e-25 119.0 221 36.7
Os10g0163100 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 5.1e-25 119.0 190 40.5
Lj2A1153G48 Lonicera japonica HOM05D003973 ORTHO05D004679 6.6e-25 118.6 182 44.5
SMO239G0162 Selaginella moellendorffii HOM05D003973 ORTHO05D004679 1.1e-24 117.9 180 40.6
Sc17g0000740 Simmondsia chinensis HOM05D003973 ORTHO05D004679 1.1e-24 117.9 164 47.6
Duzib133G1136 Durio zibethinus HOM05D003973 ORTHO05D004679 4.3e-24 115.9 154 48.1
AUR62024729 Chenopodium quinoa HOM05D003973 ORTHO05D004679 2.1e-23 113.6 185 41.6
AUR62024730 Chenopodium quinoa HOM05D003973 ORTHO05D004679 2.1e-23 113.6 185 41.6
Prupe.8G225400 Prunus persica HOM05D003973 ORTHO05D004679 8.1e-23 111.7 153 49.0
Oeu058816.4 Olea europaea HOM05D003973 ORTHO05D004679 1.4e-22 110.9 273 33.7
Ah.02g111890 Amaranthus hybridus HOM05D003973 ORTHO05D004679 3.1e-22 109.8 183 38.8
CBR_g24398 Chara braunii HOM05D003973 ORTHO05D004679 2.0e-21 107.1 182 36.3
Mapoly0002s0148 Marchantia polymorpha HOM05D003973 ORTHO05D004679 1.0e-17 94.7 179 33.5
VMungo0720G0690 Vigna mungo HOM05D003973 ORTHO05D004679 3.0e-17 93.2 166 41.6
Pp3c2_1820 Physcomitrium patens HOM05D003973 ORTHO05D004679 5.1e-17 92.4 182 33.0
Pp3c10_9800 Physcomitrium patens HOM05D003973 ORTHO05D004679 6.6e-17 92.0 182 31.9
Hund09596 Selenicereus undatus HOM05D003973 ORTHO05D004679 1.1e-16 91.3 179 38.0
Psat5g109680 Pisum sativum HOM05D000050 ORTHO05D004679 9.6e-16 88.2 44 90.9
BraA05t20372Z Brassica rapa HOM05D003973 ORTHO05D004679 2.1e-15 87.0 166 39.8
AUR62011889 Chenopodium quinoa HOM05D003973 ORTHO05D004679 3.8e-12 76.3 183 32.2
Psat4g005800 Pisum sativum HOM05D000050 ORTHO05D000771 6.4e-12 75.5 121 39.7
Medtr4g132400 Medicago truncatula HOM05D000050 ORTHO05D000771 1.9e-11 73.9 122 39.3
TPR.G19732 Trifolium pratense HOM05D000050 ORTHO05D000771 3.2e-11 73.2 39 79.5
AagrBONN_evm.TU.Sc2ySwM_344.134 Anthoceros agrestis HOM05D003973 ORTHO05D004679 5.4e-11 72.4 47 70.2
unitig_60.g25752 Utricularia gibba HOM05D003973 ORTHO05D004679 9.3e-11 71.6 47 70.2
A05p14440 Brassica napus HOM05D003973 ORTHO05D004679 2.1e-10 70.5 166 33.7
MCO05G121 Micromonas commoda HOM05D003973 ORTHO05D004679 3.5e-10 69.7 188 26.6
BcaB06g28438 Brassica carinata HOM05D003973 ORTHO05D004679 8.7e-09 65.1 33 93.9
VMungo0848G0001 Vigna mungo HOM05D000050 ORTHO05D000771 1.9e-08 63.9 37 67.6
CDE02G3928 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 4.3e-08 62.8 36 75.0
Glyma.17G011600 Glycine max HOM05D000050 ORTHO05D000771 4.3e-08 62.8 133 34.6
Glyma.07G262500 Glycine max HOM05D000050 ORTHO05D000771 5.6e-08 62.4 133 34.6
Cre09.g391500 Chlamydomonas reinhardtii HOM05D003973 ORTHO05D004679 8.1e-07 58.5 103 35.9
Lj4g0014257 Lotus japonicus HOM05D000050 ORTHO05D000771 8.1e-07 58.5 120 33.3
Phvul.003G080700 Phaseolus vulgaris HOM05D000050 ORTHO05D000771 1.1e-06 58.2 136 33.8
PGR042G1268 Punica granatum HOM05D000050 ORTHO05D000771 4.0e-06 56.2 38 60.5
PGR044G0816 Punica granatum HOM05D000050 ORTHO05D000771 4.0e-06 56.2 38 60.5
Oeu035896.1 Olea europaea HOM05D000050 ORTHO05D000771 5.3e-06 55.8 38 63.2
AL2G13650 Arabidopsis lyrata HOM05D000050 ORTHO05D000771 6.9e-06 55.5 48 52.1
Eucgr.E04018 Eucalyptus grandis HOM05D000050 ORTHO05D000771 6.9e-06 55.5 39 56.4
Nitab4.5_0009577g0040 Nicotiana tabacum HOM05D000050 ORTHO05D000771 6.9e-06 55.5 41 51.2
AL2G13660 Arabidopsis lyrata HOM05D000050 ORTHO05D000771 9.0e-06 55.1 47 51.1
Nitab4.5_0000900g0050 Nicotiana tabacum HOM05D000050 ORTHO05D000771 9.0e-06 55.1 41 51.2


User provided reference genes

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