Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 9.5e-129 464.5 472 100.0
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 1.1e-57 228.4 129 84.5
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 5.7e-57 226.1 145 77.9
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 6.3e-56 222.6 124 83.9
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 5.3e-55 219.5 153 74.5
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 1.2e-54 218.4 153 73.9
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 1.0e-53 215.3 196 64.8
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 5.0e-53 213.0 187 62.0
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 5.0e-53 213.0 186 62.9
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 1.4e-52 211.5 187 67.9
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 1.4e-52 211.5 121 81.8
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 1.9e-52 211.1 149 69.8
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 3.2e-52 210.3 120 80.8
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 7.2e-52 209.1 157 67.5
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 9.4e-52 208.8 155 67.7
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 1.2e-51 208.4 136 72.8
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 2.7e-51 207.2 132 75.0
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 3.6e-51 206.8 157 68.2
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 4.6e-51 206.5 185 67.6
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 3.0e-50 203.8 180 67.2
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 6.7e-50 202.6 138 71.0
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 8.8e-50 202.2 139 66.2
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 2.5e-49 200.7 139 65.5
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 3.7e-48 196.8 139 65.5
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 4.8e-48 196.4 116 76.7
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 8.2e-48 195.7 116 76.7
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 9.1e-47 192.2 218 56.9
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 3.4e-46 190.3 155 62.6
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 3.4e-46 190.3 184 56.5
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 4.5e-46 189.9 125 72.0
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 7.7e-46 189.1 151 64.2
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 7.7e-46 189.1 126 68.3
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 1.3e-45 188.3 177 57.1
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 8.5e-45 185.7 138 63.8
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 2.5e-44 184.1 136 64.0
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 3.2e-44 183.7 151 61.6
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 3.2e-44 183.7 138 62.3
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 4.2e-44 183.3 119 69.7
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 4.2e-44 183.3 129 67.4
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 4.2e-44 183.3 113 73.5
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 1.6e-43 181.4 139 63.3
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 4.7e-43 179.9 114 70.2
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 6.1e-43 179.5 134 64.9
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 1.0e-42 178.7 136 64.0
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 1.0e-42 178.7 186 52.2
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 1.0e-42 178.7 114 69.3
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 2.3e-42 177.6 114 69.3
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 5.1e-42 176.4 152 57.9
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 8.8e-42 175.6 193 51.3
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 1.1e-41 175.3 145 60.7
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 1.5e-41 174.9 129 64.3
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 1.5e-41 174.9 190 53.2
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 2.0e-41 174.5 137 63.5
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 2.6e-41 174.1 134 64.2
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 3.3e-41 173.7 127 63.8
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 3.3e-41 173.7 127 63.8
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 3.3e-41 173.7 127 63.8
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 3.3e-41 173.7 127 63.8
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 3.3e-41 173.7 127 63.8
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 3.3e-41 173.7 157 57.3
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 3.3e-41 173.7 226 51.8
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 3.3e-41 173.7 194 53.1
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 4.4e-41 173.3 113 70.8
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 5.7e-41 172.9 121 65.3
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 5.7e-41 172.9 113 69.9
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 7.4e-41 172.6 126 65.1
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 7.4e-41 172.6 126 65.1
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 7.4e-41 172.6 126 65.1
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 7.4e-41 172.6 126 65.1
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 7.4e-41 172.6 126 65.1
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 7.4e-41 172.6 135 61.5
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 7.4e-41 172.6 143 61.5
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 9.7e-41 172.2 133 64.7
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 1.7e-40 171.4 142 61.3
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 2.2e-40 171.0 159 57.2
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 2.2e-40 171.0 139 61.9
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 3.7e-40 170.2 149 57.7
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 4.8e-40 169.9 126 62.7
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 8.2e-40 169.1 107 72.9
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.1e-39 168.7 184 51.1
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 1.1e-39 168.7 114 68.4
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 1.8e-39 167.9 155 55.5
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 1.8e-39 167.9 139 58.3
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 4.1e-39 166.8 165 55.2
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 5.3e-39 166.4 165 58.2
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 5.3e-39 166.4 153 56.9
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 9.1e-39 165.6 192 52.6
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 9.1e-39 165.6 124 62.1
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 9.1e-39 165.6 148 56.1
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 9.1e-39 165.6 135 62.2
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 1.2e-38 165.2 158 56.3
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 1.2e-38 165.2 154 57.8
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.5e-38 164.9 137 61.3
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 2.0e-38 164.5 119 63.9
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 2.0e-38 164.5 173 53.2
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 2.0e-38 164.5 146 56.8
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 3.5e-38 163.7 96 85.4
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 5.9e-38 162.9 137 60.6
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 5.9e-38 162.9 118 67.8
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.0e-37 162.2 123 64.2
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.0e-37 162.2 122 64.8
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 1.3e-37 161.8 113 68.1
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 1.3e-37 161.8 125 62.4
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 1.7e-37 161.4 120 67.5
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 2.2e-37 161.0 174 51.1
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 2.2e-37 161.0 114 65.8
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 3.8e-37 160.2 119 63.9
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 5.0e-37 159.8 174 51.1
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.9e-36 157.9 114 64.9
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 2.5e-36 157.5 167 56.9
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 3.2e-36 157.1 129 58.9
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.2e-36 156.8 174 50.0
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 5.5e-36 156.4 113 61.9
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 1.2e-35 155.2 135 57.8
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 2.1e-35 154.5 120 60.8
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 2.1e-35 154.5 135 59.3
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 2.7e-35 154.1 125 60.0
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 4.7e-35 153.3 113 61.1
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 4.7e-35 153.3 125 60.0
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 4.7e-35 153.3 113 61.1
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 8.0e-35 152.5 118 61.9
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 1.8e-34 151.4 159 50.3
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 2.3e-34 151.0 160 53.8
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 3.9e-34 150.2 125 58.4
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 5.2e-34 149.8 133 57.9
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 6.7e-34 149.4 134 61.2
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 6.7e-34 149.4 136 55.9
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 1.1e-33 148.7 111 62.2
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 2.0e-33 147.9 143 55.2
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 2.6e-33 147.5 126 59.5
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 3.3e-33 147.1 119 62.2
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 5.7e-33 146.4 183 47.0
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 1.7e-32 144.8 166 48.2
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 2.2e-32 144.4 126 55.6
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 3.7e-32 143.7 130 53.1
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 4.8e-32 143.3 184 46.7
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 6.3e-32 142.9 128 62.5
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 6.3e-32 142.9 130 53.1
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 8.2e-32 142.5 152 49.3
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 1.1e-31 142.1 125 60.0
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 4.1e-31 140.2 123 53.7
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 7.7e-30 136.0 109 54.1
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 1.3e-29 135.2 142 50.0
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 1.7e-29 134.8 151 46.4
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 6.5e-29 132.9 140 47.9
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 8.5e-29 132.5 146 50.7
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 8.5e-29 132.5 147 47.6
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 1.9e-28 131.3 119 59.7
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 4.2e-28 130.2 113 54.9
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 5.5e-28 129.8 107 52.3
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 5.5e-28 129.8 128 50.8
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 1.2e-27 128.6 108 50.9
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 1.2e-27 128.6 115 52.2
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 1.6e-27 128.3 114 54.4
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 2.1e-27 127.9 114 54.4
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 2.1e-27 127.9 114 54.4
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 2.1e-27 127.9 114 54.4
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 4.7e-27 126.7 135 51.1
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.0e-26 125.6 116 50.9
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 8.8e-26 122.5 121 49.6
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 4.4e-25 120.2 106 49.1
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 5.7e-25 119.8 124 46.8
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 9.7e-25 119.0 109 51.4
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 1.7e-24 118.2 109 49.5
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 1.4e-23 115.2 135 48.1
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 9.1e-23 112.5 102 52.0
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 6.5e-21 106.3 153 41.8
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 9.4e-20 102.4 161 42.9
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 5.7e-17 93.2 158 41.1
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 7.5e-17 92.8 147 40.8
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 6.3e-16 89.7 107 45.8
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 2.0e-14 84.7 139 39.6
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 2.0e-14 84.7 110 43.6
TPR.G40574 Trifolium pratense HOM05D003750 ORTHO05D004337 1.7e-13 81.6 46 67.4
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 2.3e-13 81.3 67 58.2
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 2.3e-13 81.3 119 42.0
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.4e-10 72.0 209 32.1
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 4.0e-10 70.5 108 38.9
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 3.4e-09 67.4 114 34.2


User provided reference genes

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