Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 7.8e-56 220.3 119 100.0
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 8.7e-31 137.1 122 73.0
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 6.2e-29 131.0 121 70.2
Ca_06456_v3 Cicer arietinum L. HOM05D004793 ORTHO05D004423 9.3e-25 117.1 125 69.6
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 4.8e-21 104.8 136 61.0
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 6.9e-20 100.9 127 57.5
Glyma.02G305500 Glycine max HOM05D004793 ORTHO05D004423 1.7e-18 96.3 129 56.6
VMungo0647G0475 Vigna mungo HOM05D004793 ORTHO05D004423 4.2e-17 91.7 140 52.9
Phvul.008G285200 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 9.4e-17 90.5 132 53.8
Lalb_Chr04g0247291 Lupinus albus HOM05D004793 ORTHO05D004423 3.9e-15 85.1 123 56.1
Lalb_Chr04g0247481 Lupinus albus HOM05D004793 ORTHO05D004423 3.9e-15 85.1 123 56.1
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 3.3e-14 82.0 130 51.5
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 7.4e-14 80.9 138 46.4
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 9.7e-14 80.5 135 49.6
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 1.7e-13 79.7 131 48.9
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 4.8e-13 78.2 138 46.4
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 6.3e-13 77.8 122 45.1
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 6.3e-13 77.8 122 45.1
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 8.2e-13 77.4 132 48.5
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 1.2e-11 73.6 140 42.1
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 2.0e-11 72.8 141 47.5
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 3.4e-11 72.0 125 44.8
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 3.4e-11 72.0 125 45.6
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 3.4e-11 72.0 125 45.6
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 5.9e-11 71.2 129 46.5
Eucgr.A01045 Eucalyptus grandis HOM05D004793 ORTHO05D004423 7.7e-11 70.9 139 42.4
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 1.3e-10 70.1 133 45.1
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 1.3e-10 70.1 134 44.8
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 1.3e-10 70.1 144 44.4
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 1.7e-10 69.7 131 44.3
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 2.2e-10 69.3 134 44.8
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 2.2e-10 69.3 130 45.4
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 5.0e-10 68.2 134 44.8
DCAR_019706 Daucus carota HOM05D004793 ORTHO05D004423 3.2e-09 65.5 126 42.1
Oeu057608.1 Olea europaea HOM05D004793 ORTHO05D004423 5.5e-09 64.7 125 44.8
Oeu064364.1 Olea europaea HOM05D004793 ORTHO05D004423 5.5e-09 64.7 125 44.8
Sed0008787 Sechium edule HOM05D004793 ORTHO05D004423 9.4e-09 63.9 133 44.4
Aqoxy1G04226 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 1.2e-08 63.5 137 38.7
Lsat_1_v5_gn_5_121620 Lactuca sativa HOM05D004793 ORTHO05D004423 1.2e-08 63.5 109 45.0
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.6e-08 63.2 129 42.6
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.6e-08 63.2 129 42.6
TWI36G0659 Tripterygium wilfordii HOM05D004793 ORTHO05D004423 2.1e-08 62.8 137 45.3
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 2.1e-08 62.8 130 40.8
Potri.014G165000 Populus trichocarpa HOM05D004793 ORTHO05D004423 2.7e-08 62.4 146 40.4
arahy.Tifrunner.gnm1.ann1.FQ33KH Arachis hypogaea HOM05D004793 ORTHO05D038859 6.1e-08 61.2 71 45.1
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 1.0e-07 60.5 133 38.3
HPP92_014035 Vanilla planifolia HOM05D004793 ORTHO05D004423 1.4e-07 60.1 122 38.5
MSTRG.7149 Avicennia marina HOM05D004793 ORTHO05D004423 1.8e-07 59.7 141 39.7
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 2.3e-07 59.3 133 39.1
Gohir.A07G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.3e-07 59.3 125 40.8
MELO3C024110.2 Cucumis melo HOM05D004793 ORTHO05D004423 3.9e-07 58.5 138 42.8
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 3.9e-07 58.5 146 37.7
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 3.9e-07 58.5 130 41.5
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 6.7e-07 57.8 143 37.1
PGR142G2586 Punica granatum HOM05D004793 ORTHO05D004423 2.6e-06 55.8 118 42.4
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 3.3e-06 55.5 131 39.7
Rhsim04G0038500 Rhododendron simsii HOM05D004793 ORTHO05D004423 3.3e-06 55.5 121 41.3
CAN.G1397.7 Capsicum annuum HOM05D037802 ORTHO05D004423 4.4e-06 55.1 135 37.8
Solyc07g047827.1 Solanum lycopersicum HOM05D037802 ORTHO05D004423 4.4e-06 55.1 132 38.6
Glyma.17G007500 Glycine max HOM05D004793 ORTHO05D004423 5.7e-06 54.7 141 41.1
Gorai.001G099200 Gossypium raimondii HOM05D004793 ORTHO05D004423 7.4e-06 54.3 125 38.4
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 7.4e-06 54.3 141 39.7
Eucgr.K00650 Eucalyptus grandis HOM05D004793 ORTHO05D004423 9.7e-06 53.9 127 37.0
QL05p068872 Quercus lobata HOM05D004793 ORTHO05D004423 9.7e-06 53.9 144 36.8


User provided reference genes

Program Settings