Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g003320 Pisum sativum HOM05D000002 ORTHO05D000047 7.4e-52 206.8 98 100.0
Psat5g071680 Pisum sativum HOM05D000002 ORTHO05D000047 1.8e-29 132.5 94 73.4
Psat0s3550g0080 Pisum sativum HOM05D000002 ORTHO05D000047 3.9e-29 131.3 93 71.0
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-18 96.3 104 53.8
Hma1.2p1_0668F.1_g199811 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-18 95.9 83 60.2
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.5e-17 91.3 84 59.5
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-16 90.1 84 59.5
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-16 90.1 84 59.5
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-16 90.1 84 59.5
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-16 90.1 84 59.5
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-16 90.1 84 59.5
CSS0021536 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-16 90.1 84 59.5
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-16 90.1 84 59.5
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-16 90.1 84 59.5
CSS0036738 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-16 90.1 84 59.5
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-16 90.1 84 59.5
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-16 89.7 84 58.3
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-16 89.7 84 59.5
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.2e-16 89.0 84 58.3
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-16 87.8 84 58.3
CSS0048790 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-16 87.0 77 61.0
CSS0036394 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-15 86.3 77 61.0
Lj1g0008265 Lotus japonicus HOM05D000002 ORTHO05D000047 1.5e-15 86.3 67 62.7
Lj3g0020805 Lotus japonicus HOM05D000002 ORTHO05D000047 7.2e-15 84.0 65 63.1
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.4e-10 68.9 63 47.6
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.4e-10 68.9 63 47.6
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.4e-10 68.9 63 47.6
CSS0000724 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-10 68.6 72 51.4
Prupe.3G076700 Prunus persica HOM05D000002 ORTHO05D000047 4.1e-10 68.2 73 41.1
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-10 67.4 63 47.6
CSS0015611 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-09 65.1 83 41.0
Prupe.6G327500 Prunus persica HOM05D000002 ORTHO05D000047 3.5e-09 65.1 73 39.7
GSVIVG01029816001 Vitis vinifera HOM05D000168 ORTHO05D000047 4.5e-09 64.7 90 36.7
Prupe.4G181800 Prunus persica HOM05D000002 ORTHO05D000047 5.9e-09 64.3 73 39.7
Atru.chr2.1022 Acer truncatum HOM05D000002 ORTHO05D000047 7.7e-09 63.9 68 45.6
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 7.7e-09 63.9 72 41.7
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 1.3e-08 63.2 59 45.8
Oeu050509.1 Olea europaea HOM05D000002 ORTHO05D000047 1.7e-08 62.8 60 45.0
Prupe.6G115900 Prunus persica HOM05D000002 ORTHO05D000047 1.7e-08 62.8 80 38.8
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 8.5e-08 60.5 85 41.2
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.5e-08 60.5 81 35.8
Oeu029282.1 Olea europaea HOM05D000002 ORTHO05D000047 1.1e-07 60.1 94 37.2
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 1.1e-07 60.1 85 40.0
Cpa.g.sc10.7 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-07 59.7 79 40.5
Cpa.g.sc110.7 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-07 59.7 69 37.7
Oeu027903.1 Olea europaea HOM05D000002 ORTHO05D000047 1.5e-07 59.7 96 36.5
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 2.5e-07 58.9 70 42.9
Hma1.2p1_0026F.1_g016410 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.2e-07 58.5 76 39.5
Thecc.05G205900 Theobroma cacao HOM05D000002 ORTHO05D000047 3.2e-07 58.5 88 36.4
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.2 70 42.9
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.2 70 42.9
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.2e-07 58.2 70 42.9
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.2 70 42.9
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.2 70 42.9
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.2 70 42.9
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.2 70 42.9
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.2e-07 58.2 70 42.9
CSS0025512 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.2e-07 58.2 78 41.0
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.2 70 42.9
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.2 70 42.9
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.2 70 42.9
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.2 70 42.9
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.2e-07 58.2 70 42.9
Eucgr.H03782 Eucalyptus grandis HOM05D000002 ORTHO05D000047 4.2e-07 58.2 54 50.0
Aqoxy7G01998 Aquilegia oxysepala HOM05D000002 ORTHO05D000047 7.2e-07 57.4 51 47.1
CSS0003806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-07 57.4 70 42.9
CSS0004509 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-07 57.4 70 42.9
CSS0005779 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-07 57.4 70 42.9
CSS0005870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-07 57.4 70 42.9
CSS0006173 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-07 57.4 70 42.9
CSS0008635 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-07 57.4 70 42.9
CSS0014620 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-07 57.4 70 42.9
CSS0015126 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-07 57.4 70 42.9
CSS0024888 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-07 57.4 70 42.9
CSS0033964 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-07 57.4 70 42.9
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-07 57.4 70 42.9
CANSAT54G2266 Cannabis sativa HOM05D000002 ORTHO05D000047 7.2e-07 57.4 85 40.0
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.2e-07 57.4 63 39.7
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.2e-07 57.4 63 39.7
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.4e-07 57.0 70 42.9
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.4e-07 57.0 70 41.4
CSS0028950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.4e-07 57.0 88 37.5
Lj1g0019835 Lotus japonicus HOM05D000002 ORTHO05D000047 9.4e-07 57.0 84 38.1
TAR546G0002 Trochodendron aralioides HOM05D000002 ORTHO05D017724 9.4e-07 57.0 53 45.3
Atru.chr2.1700 Acer truncatum HOM05D000002 ORTHO05D000047 1.2e-06 56.6 64 40.6
CSS0008571 Camellia sinensis var. sinensis HOM05D014314 ORTHO05D000047 1.2e-06 56.6 82 39.0
Hma1.2p1_1149F.1_g261730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-06 56.6 80 40.0
Ah.03g146020 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.6e-06 56.2 58 46.6
Cpa.g.sc227.9 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-06 56.2 65 41.5
Oeu021652.1 Olea europaea HOM05D000002 ORTHO05D000047 1.6e-06 56.2 82 40.2
Cpa.g.sc91.54 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-06 55.8 64 43.8
Atru.chr11.3 Acer truncatum HOM05D000002 ORTHO05D000047 2.7e-06 55.5 65 44.6
Atru.chr2.1876 Acer truncatum HOM05D000002 ORTHO05D000047 2.7e-06 55.5 73 35.6
Cpa.g.sc159.30 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-06 55.5 92 33.7
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-06 55.5 70 42.9
Rhsim12G0116200 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.7e-06 55.5 48 50.0
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-06 55.5 70 41.4
Lj3g0012381 Lotus japonicus HOM05D000002 ORTHO05D000047 3.6e-06 55.1 71 39.4
Sabra17G0026400 Salix brachista HOM05D000002 ORTHO05D000047 3.6e-06 55.1 45 46.7
Hma1.2p1_0661F.1_g198180 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.7e-06 54.7 42 61.9
CSS0007345 Camellia sinensis var. sinensis HOM05D014314 ORTHO05D000047 6.1e-06 54.3 93 35.5
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.1e-06 54.3 68 39.7
MBI06_g16700_MAGBIO Magnolia biondii HOM05D031959 ORTHO05D000047 6.1e-06 54.3 69 42.0
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.0e-06 53.9 73 39.7
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.0e-06 53.9 71 36.6
Manes.18G122701 Manihot esculenta HOM05D000002 ORTHO05D000047 8.0e-06 53.9 49 36.7
Sabra04G0151400 Salix brachista HOM05D000002 ORTHO05D000047 8.0e-06 53.9 48 43.8


User provided reference genes

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