Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 7.7e-42 173.3 83 100.0
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 1.9e-32 142.1 73 93.2
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 9.4e-32 139.8 79 83.5
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 1.2e-31 139.4 79 82.3
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 2.7e-31 138.3 73 90.4
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 4.7e-31 137.5 79 82.3
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 4.7e-31 137.5 73 86.3
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 4.7e-31 137.5 73 89.0
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 4.7e-31 137.5 79 82.3
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 7.9e-31 136.7 81 82.7
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 7.9e-31 136.7 81 82.7
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 7.9e-31 136.7 73 91.8
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 7.9e-31 136.7 73 91.8
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 7.9e-31 136.7 73 91.8
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 7.9e-31 136.7 73 91.8
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 7.9e-31 136.7 73 91.8
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 7.9e-31 136.7 73 91.8
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 1.0e-30 136.3 73 90.4
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 2.3e-30 135.2 73 90.4
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 3.9e-30 134.4 73 87.7
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 6.7e-30 133.7 73 86.3
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 6.7e-30 133.7 73 86.3
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 1.1e-29 132.9 73 87.7
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 1.1e-29 132.9 73 84.9
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 1.1e-29 132.9 73 87.7
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 1.5e-29 132.5 73 89.0
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 1.5e-29 132.5 73 84.9
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.5e-29 132.5 73 84.9
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 2.0e-29 132.1 73 86.3
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 2.6e-29 131.7 73 86.3
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.6e-29 131.7 73 86.3
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.6e-29 131.7 73 86.3
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.6e-29 131.7 73 86.3
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 2.6e-29 131.7 73 86.3
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 2.6e-29 131.7 73 87.7
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 2.6e-29 131.7 73 84.9
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 3.3e-29 131.3 73 86.3
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 3.3e-29 131.3 73 86.3
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 3.3e-29 131.3 73 87.7
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 4.4e-29 131.0 73 84.9
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 5.7e-29 130.6 74 85.1
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 5.7e-29 130.6 76 81.6
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 7.4e-29 130.2 73 87.7
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 7.4e-29 130.2 73 83.6
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 9.7e-29 129.8 73 83.6
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 9.7e-29 129.8 73 83.6
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 1.3e-28 129.4 73 83.6
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 1.3e-28 129.4 80 78.8
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 1.3e-28 129.4 73 86.3
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 2.8e-28 128.3 74 85.1
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 3.7e-28 127.9 73 83.6
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 3.7e-28 127.9 79 77.2
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 3.7e-28 127.9 73 86.3
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 4.8e-28 127.5 74 83.8
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 6.3e-28 127.1 80 78.8
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 6.3e-28 127.1 73 86.3
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 8.2e-28 126.7 77 80.5
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 8.2e-28 126.7 74 85.1
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.1e-27 126.3 73 83.6
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.1e-27 126.3 73 83.6
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.1e-27 126.3 73 83.6
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.1e-27 126.3 73 86.3
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.1e-27 126.3 73 86.3
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 1.1e-27 126.3 73 83.6
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.1e-27 126.3 71 83.1
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 1.4e-27 125.9 70 82.9
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 1.4e-27 125.9 73 84.9
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 1.8e-27 125.6 73 80.8
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.8e-27 125.6 74 83.8
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 1.8e-27 125.6 73 82.2
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 2.4e-27 125.2 65 90.8
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 2.4e-27 125.2 72 79.2
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 2.4e-27 125.2 72 81.9
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 3.1e-27 124.8 72 80.6
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 3.1e-27 124.8 69 87.0
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 5.3e-27 124.0 73 75.3
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 5.3e-27 124.0 73 82.2
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 9.1e-27 123.2 68 83.8
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 9.1e-27 123.2 74 82.4
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 2.6e-26 121.7 72 79.2
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 2.6e-26 121.7 62 90.3
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 5.9e-26 120.6 73 76.7
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 7.7e-26 120.2 67 83.6
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 3.8e-25 117.9 69 78.3
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 6.5e-25 117.1 72 75.0
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 4.2e-24 114.4 65 81.5
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 5.5e-24 114.0 58 89.7
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 6.1e-23 110.5 71 71.8
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 1.8e-22 109.0 54 92.6
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 2.3e-22 108.6 70 70.0
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 5.2e-22 107.5 73 72.6
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 6.7e-22 107.1 116 50.0
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 1.3e-20 102.8 49 98.0
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 4.8e-20 100.9 48 93.8
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 7.2e-16 87.0 57 66.7
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 1.8e-14 82.4 61 63.9
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 5.2e-14 80.9 52 65.4
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 3.5e-10 68.2 69 49.3


User provided reference genes

Program Settings