Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g213360 Pisum sativum HOM05D000002 ORTHO05D000001 2.3e-129 465.7 260 100.0
Psat1g044880 Pisum sativum HOM05D008069 ORTHO05D010454 3.7e-18 96.3 49 85.7
Psat5g133720 Pisum sativum HOM05D000002 ORTHO05D000001 2.5e-14 83.6 59 66.1
RcHm_v2.0_Chr4g0409151 Rosa chinensis HOM05D000002 ORTHO05D000001 7.3e-14 82.0 53 66.0
FvH4_6g43841 Fragaria vesca HOM05D000002 ORTHO05D000001 6.2e-13 79.0 50 68.0
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 1.1e-12 78.2 48 66.7
ECA240G1585 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-12 75.5 42 71.4
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.9e-12 75.1 47 63.8
ECA233G2113 Erigeron canadensis HOM05D001255 ORTHO05D001246 1.5e-11 74.3 54 61.1
Lalb_Chr23g0274091 Lupinus albus HOM05D000002 ORTHO05D000001 4.4e-11 72.8 52 59.6
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-11 72.8 52 57.7
Sopen07g005890 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-11 72.8 53 58.5
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-11 72.8 52 57.7
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-11 72.8 52 57.7
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-11 72.8 52 57.7
Atru.chr4.1540 Acer truncatum HOM05D000002 ORTHO05D000001 5.8e-11 72.4 52 61.5
CSS0000038 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-11 72.0 48 60.4
CSS0042530 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-11 72.0 46 63.0
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-11 72.0 47 66.0
ECA246G4670 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.5e-11 72.0 42 69.0
SHI52580 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-11 72.0 46 63.0
SHI53128 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-11 72.0 46 63.0
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-11 72.0 46 63.0
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-11 72.0 46 63.0
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-11 72.0 46 63.0
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-11 72.0 46 63.0
CSS0001792 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.8e-11 71.6 64 54.7
CSS0017331 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.8e-11 71.6 48 60.4
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.8e-11 71.6 45 64.4
CSS0047274 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.8e-11 71.6 45 64.4
Hma1.2p1_0176F.1_g077340 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.8e-11 71.6 53 60.4
CSS0024481 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-10 71.2 59 54.2
CSS0044856 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-10 71.2 45 64.4
ECA233G2170 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-10 71.2 39 74.4
Nn6g34560 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-10 71.2 90 42.2
RcHm_v2.0_Chr1g0330731 Rosa chinensis HOM05D000002 ORTHO05D000001 1.3e-10 71.2 47 61.7
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-10 70.9 47 66.0
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-10 70.9 47 66.0
ECA232G4093 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-10 70.9 42 64.3
Nn2g12419 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-10 70.9 64 51.6
Nn6g34561 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-10 70.9 64 51.6
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 1.7e-10 70.9 46 63.0
Atru.chr10.1094 Acer truncatum HOM05D000002 ORTHO05D000001 2.2e-10 70.5 53 56.6
ECA232G0373 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-10 70.5 40 70.0
Sopen01g009120 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-10 70.5 46 65.2
ECA240G3412 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-10 70.1 64 46.9
Hma1.2p1_2049F.1_g312480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.9e-10 70.1 53 58.5
Sopen05g007860 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-10 70.1 46 60.9
CSS0005068 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-10 69.7 44 65.9
Nn5g28050 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.7e-10 69.7 45 62.2
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.7e-10 69.7 78 50.0
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-10 69.7 45 66.7
ECA238G0437 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-10 69.3 42 61.9
ECA247G3331 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-10 69.3 42 61.9
Nn1g06976 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.9e-10 69.3 52 53.8
Rhsim09G0033700 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.9e-10 69.3 64 51.6
Sopen10g021260 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-10 69.3 46 65.2
Hma1.2p1_1768F.1_g301590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.4e-10 68.9 49 59.2
Nn1g02421 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.4e-10 68.9 41 65.9
CSS0013769 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.3e-10 68.6 54 59.3
CSS0017329 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.3e-10 68.6 45 60.0
CSS0027637 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.3e-10 68.6 43 65.1
ECA234G3833 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-10 68.6 41 63.4
CSS0014778 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-09 68.2 45 60.0
CSS0020765 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-09 68.2 48 54.2
CANSAT01G2627 Cannabis sativa HOM05D000002 ORTHO05D000001 1.1e-09 68.2 47 59.6
Ciclev10013956m.g Citrus clementina HOM05D000002 ORTHO05D000001 1.1e-09 68.2 59 55.9
Nn4g26285 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-09 68.2 58 50.0
QL03p066067 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-09 68.2 59 50.8
Rhsim02G0093500 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-09 68.2 56 57.1
RhsimUnG0182300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-09 68.2 56 57.1
Sopen11g022020 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-09 68.2 46 58.7
Atru.chr4.75 Acer truncatum HOM05D000002 ORTHO05D000001 1.4e-09 67.8 47 59.6
CSS0019043 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-09 67.8 58 51.7
Nn1g04729 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.4e-09 67.8 47 61.7
QL09p034601 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-09 67.8 42 66.7
QL11p047249 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-09 67.8 42 66.7
RcHm_v2.0_Chr2g0154461 Rosa chinensis HOM05D000002 ORTHO05D000001 1.4e-09 67.8 42 64.3
RcHm_v2.0_Chr7g0198271 Rosa chinensis HOM05D000002 ORTHO05D000001 1.4e-09 67.8 42 64.3
Sopen01g013480 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-09 67.8 44 65.9
ECA246G0354 Erigeron canadensis HOM05D000230 ORTHO05D000176 1.9e-09 67.4 41 68.3
Hma1.2p1_0171F.1_g075850 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-09 67.4 47 57.4
Hma1.2p1_0774F.1_g216300 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-09 67.4 42 66.7
Rhsim03G0172600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.9e-09 67.4 46 60.9
RhsimUnG0178000 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.9e-09 67.4 46 60.9
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-09 67.0 49 57.1
PSO541G3208 Papaver somniferum HOM05D000002 ORTHO05D000001 2.4e-09 67.0 50 52.0
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-09 66.6 47 57.4
ECA246G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-09 66.6 39 69.2
Hma1.2p1_0774F.1_g216290 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.2e-09 66.6 42 64.3
ECA233G1773 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-09 66.2 35 74.3
ECA234G4446 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-09 66.2 35 74.3
Nn1g07710 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.1e-09 66.2 58 48.3
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.1e-09 66.2 46 60.9
RhsimUnG0229000 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.1e-09 66.2 48 54.2
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-09 65.5 47 57.4
Manes.10G112229 Manihot esculenta HOM05D000002 ORTHO05D000001 7.0e-09 65.5 42 64.3
BolC4t26198H Brassica oleracea HOM05D000002 ORTHO05D000001 9.2e-09 65.1 44 56.8
Hma1.2p1_0414F.1_g147800 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.2e-09 65.1 47 57.4
Hma1.2p1_0774F.1_g216320 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.2e-09 65.1 41 63.4
Nn4g24384 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.2e-09 65.1 53 54.7
EL10Ac8g19578 Beta vulgaris HOM05D000002 ORTHO05D000001 1.2e-08 64.7 46 54.3
C03p36830 Brassica napus HOM05D000002 ORTHO05D000001 1.2e-08 64.7 43 53.5
CSS0045479 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-08 64.7 47 55.3
Nn2g13324 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.2e-08 64.7 41 63.4
Nn5g30083 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.2e-08 64.7 43 62.8
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 1.6e-08 64.3 42 64.3
Sopen01g013490 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 64.3 46 60.9
CSS0012950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-08 63.9 52 57.7
CSS0040283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-08 63.9 49 57.1
CSS0041440 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-08 63.9 47 61.7
Hma1.2p1_0184F.1_g081330 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-08 63.9 42 64.3
ECA238G2859 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-08 63.5 54 46.3
Hma1.2p1_1498F.1_g287120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.7e-08 63.5 41 63.4
Hma1.2p1_0010F.1_g006990 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-08 63.2 41 61.0
Lalb_Chr02g0155271 Lupinus albus HOM05D000002 ORTHO05D000001 3.5e-08 63.2 52 50.0
Manes.09G095934 Manihot esculenta HOM05D000002 ORTHO05D000001 6.0e-08 62.4 47 55.3
Nn1g06669 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.0e-08 62.4 41 63.4
Sopen03g020180 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-08 62.4 46 56.5
TWI56G1078 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 6.0e-08 62.4 43 58.1
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-08 62.0 36 69.4
Cpa.g.sc138.15 Carica papaya HOM05D000002 ORTHO05D000001 7.8e-08 62.0 41 63.4
ECA234G4791 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-08 62.0 47 59.6
Nn2g14659 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.8e-08 62.0 52 48.1
Psat2g034080 Pisum sativum HOM05D000002 ORTHO05D000001 7.8e-08 62.0 43 58.1
Nn2g10460 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-07 61.2 47 55.3
CSS0046044 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-07 60.1 48 50.0
Psat4g144840 Pisum sativum HOM05D000002 ORTHO05D000001 3.0e-07 60.1 45 48.9
CSS0021106 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-07 59.7 61 47.5
Nn1g08060 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.9e-07 59.7 43 60.5
Sopen11g010290 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-07 59.7 49 49.0
EL10Ac6g13816 Beta vulgaris HOM05D000002 ORTHO05D000001 5.0e-07 59.3 45 53.3
CSS0010947 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-07 59.3 83 36.1
Ciclev10023933m.g Citrus clementina HOM05D000002 ORTHO05D000001 5.0e-07 59.3 46 54.3
ECA240G2252 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.0e-07 59.3 36 61.1
VMungo1309G0289 Vigna mungo HOM05D002892 ORTHO05D003224 5.0e-07 59.3 43 55.8
CSS0016567 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-07 58.9 40 57.5
Nn1g08143 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.6e-07 58.9 31 74.2
Nn2g15368 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.6e-07 58.9 35 65.7
Nn4g26209 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.6e-07 58.9 41 63.4
Psat4g042680 Pisum sativum HOM05D000002 ORTHO05D000001 1.1e-06 58.2 31 74.2
Nn8g40241 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.5e-06 57.8 31 71.0
Sopen02g009840 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 57.8 154 26.6
Sopen06g007920 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 57.8 154 26.6
Sopen09g029100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 57.8 154 26.6
CSS0013581 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-06 57.0 37 59.5
Ca_19958_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 2.5e-06 57.0 43 51.2
ECA233G4132 Erigeron canadensis HOM05D000089 ORTHO05D000001 2.5e-06 57.0 33 66.7
Nn1g02200 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.5e-06 57.0 36 63.9
Sopen01g020600 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 57.0 45 51.1
Nn1g04728 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.3e-06 56.6 52 55.8
Sopen12g026370 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 56.6 154 26.0
EL10Ac9g20778 Beta vulgaris HOM05D000002 ORTHO05D000001 5.6e-06 55.8 37 59.5
CSS0002244 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-06 55.8 32 65.6
CSS0046990 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-06 55.8 38 60.5
Medtr8g465620 Medicago truncatula HOM05D000002 ORTHO05D000001 5.6e-06 55.8 42 54.8
CSS0034655 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-06 55.1 34 64.7
FvH4_7g13272 Fragaria vesca HOM05D000002 ORTHO05D000001 9.5e-06 55.1 81 33.3


User provided reference genes

Program Settings