Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.4e-131 473.0 243 100.0
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 4.3e-77 292.0 227 70.9
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 4.3e-77 292.0 247 67.6
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.7e-73 280.0 250 65.6
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 3.3e-69 265.8 229 64.6
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.1e-67 260.8 234 62.8
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.8e-59 233.4 234 59.0
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 2.6e-58 229.6 237 57.4
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 7.7e-58 228.0 234 59.0
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 2.2e-57 226.5 239 61.1
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 1.4e-56 223.8 239 60.3
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 2.7e-55 219.5 241 56.8
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 7.0e-51 204.9 242 53.3
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 1.2e-47 194.1 250 51.6
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 2.7e-47 193.0 242 52.5
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 3.9e-46 189.1 251 51.8
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.5e-42 176.0 240 48.8
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.5e-40 170.6 246 48.0
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 3.2e-40 169.5 230 49.1
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 7.2e-40 168.3 259 44.8
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 1.2e-39 167.5 243 46.1
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.2e-39 167.5 242 46.7
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.0e-38 164.5 249 45.0
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.4e-38 164.1 242 46.3
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.3e-36 157.5 242 43.8
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 2.8e-36 156.4 242 45.0
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 2.8e-36 156.4 242 45.0
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 3.7e-36 156.0 229 48.9
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 3.7e-36 156.0 242 45.5
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 4.8e-36 155.6 241 44.8
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 6.3e-36 155.2 238 44.5
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 4.1e-35 152.5 221 46.2
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 4.1e-35 152.5 242 44.2
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 9.1e-35 151.4 242 43.4
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.1e-35 151.4 242 43.4
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 1.0e-33 147.9 241 42.3
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.7e-33 147.1 260 43.5
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 5.0e-33 145.6 246 45.9
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 8.5e-33 144.8 239 45.2
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 3.2e-32 142.9 243 45.7
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 9.4e-32 141.4 230 44.3
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 6.1e-31 138.7 194 50.0
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 8.0e-31 138.3 237 42.2
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.0e-30 137.9 226 43.4
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.0e-30 137.9 241 44.4
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.8e-30 137.1 243 43.2
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 3.0e-30 136.3 258 41.1
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.0e-30 136.3 232 42.7
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 5.2e-30 135.6 228 46.1
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 6.8e-30 135.2 244 42.6
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 8.8e-30 134.8 232 43.5
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 8.8e-30 134.8 232 43.5
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 7.5e-29 131.7 231 43.7
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 3.7e-28 129.4 228 45.2
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 4.8e-28 129.0 259 39.0
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 6.3e-28 128.6 233 40.3
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 9.1e-27 124.8 234 39.3
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 4.5e-26 122.5 241 40.7
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 4.5e-26 122.5 246 38.6
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 4.5e-26 122.5 234 41.0
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 4.5e-26 122.5 234 40.6
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 5.9e-26 122.1 222 42.3
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 5.0e-25 119.0 237 41.8
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 6.6e-25 118.6 217 40.1
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 6.6e-25 118.6 242 39.3
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 1.1e-24 117.9 139 48.2
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 2.5e-24 116.7 313 33.9
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 5.5e-24 115.5 243 37.0
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 5.5e-24 115.5 226 39.4
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 9.5e-24 114.8 235 35.7
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 9.5e-24 114.8 224 37.9
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 1.2e-23 114.4 230 40.0
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 1.6e-23 114.0 95 60.0
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 2.1e-23 113.6 249 37.8
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 2.8e-23 113.2 243 36.6
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 2.8e-23 113.2 251 35.9
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 2.8e-23 113.2 242 38.4
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.6e-23 112.8 182 42.3
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.8e-22 110.5 252 36.1
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 2.3e-22 110.2 212 39.2
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 3.0e-22 109.8 234 36.8
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 6.8e-22 108.6 229 38.9
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 6.8e-22 108.6 205 40.0
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 1.2e-21 107.8 224 36.6
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.0e-21 107.1 237 38.8
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 2.0e-21 107.1 282 35.1
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 3.4e-21 106.3 252 40.1
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.7e-20 104.0 229 38.0
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 8.3e-20 101.7 274 36.1
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 5.4e-19 99.0 236 36.4
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 7.0e-19 98.6 243 38.3
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 9.2e-19 98.2 200 38.5
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.2e-18 97.8 253 34.8
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 2.0e-18 97.1 231 36.8
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 4.5e-18 95.9 193 39.9
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 4.5e-18 95.9 243 35.0
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 7.8e-18 95.1 231 32.9
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.7e-17 94.0 121 44.6
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 2.3e-17 93.6 227 33.0
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 4.3e-16 89.4 103 47.6
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 4.3e-16 89.4 217 37.3
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 5.6e-16 89.0 241 34.0
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 1.2e-15 87.8 252 32.9
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.1e-15 87.0 217 36.4
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.8e-15 86.7 206 40.3
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.8e-15 86.7 206 40.3
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.0e-14 84.7 243 35.4
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 4.4e-13 79.3 236 32.6
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 4.4e-13 79.3 329 27.1
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 1.4e-11 74.3 225 33.3
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.9e-11 73.9 125 41.6
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 3.5e-10 69.7 232 31.0
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 7.8e-10 68.6 190 35.8
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 2.1e-07 60.5 178 34.8


User provided reference genes

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