Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 2.0e-194 682.2 329 100.0
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 3.8e-177 624.8 327 92.7
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 4.7e-175 617.8 314 93.6
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 3.0e-174 615.1 326 89.3
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 9.7e-173 610.1 329 89.7
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 1.0e-166 590.1 327 86.2
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 3.0e-166 588.6 326 85.6
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 3.7e-164 581.6 329 85.4
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 1.6e-162 576.2 327 84.1
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 2.7e-162 575.5 327 83.8
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 1.7e-161 572.8 318 86.2
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 2.2e-161 572.4 331 82.5
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 6.5e-161 570.9 331 82.2
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.2e-159 566.6 323 83.6
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 3.6e-159 565.1 325 82.8
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 4.7e-159 564.7 325 82.5
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 8.0e-159 563.9 322 82.9
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 8.0e-159 563.9 325 82.8
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.0e-158 563.5 320 83.4
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.0e-158 563.5 329 82.4
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.0e-158 563.5 319 83.4
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.0e-158 563.5 325 82.5
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.8e-158 562.8 329 82.1
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.3e-158 562.4 325 82.8
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 2.3e-158 562.4 325 82.5
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 4.0e-158 561.6 325 83.7
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 3.4e-157 558.5 320 83.4
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 3.4e-157 558.5 319 81.8
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 3.4e-157 558.5 321 82.6
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 3.4e-157 558.5 326 81.6
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 4.4e-157 558.1 325 83.7
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 4.4e-157 558.1 325 83.1
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 4.4e-157 558.1 329 81.2
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.4e-157 558.1 320 83.4
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 4.4e-157 558.1 330 81.8
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 4.4e-157 558.1 327 82.3
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 5.7e-157 557.8 329 80.2
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 5.7e-157 557.8 329 80.2
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 5.7e-157 557.8 329 80.2
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 5.7e-157 557.8 324 81.5
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 7.5e-157 557.4 326 81.6
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 7.5e-157 557.4 323 82.4
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 9.8e-157 557.0 310 83.9
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 9.8e-157 557.0 324 81.5
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 9.8e-157 557.0 327 82.6
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.3e-156 556.6 327 81.0
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.3e-156 556.6 329 80.5
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 1.3e-156 556.6 328 82.3
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 1.7e-156 556.2 329 80.9
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 1.7e-156 556.2 329 80.9
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 2.8e-156 555.4 326 82.2
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 2.8e-156 555.4 316 82.3
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 2.8e-156 555.4 323 81.7
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 3.7e-156 555.1 327 82.0
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 3.7e-156 555.1 325 82.5
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 3.7e-156 555.1 327 80.7
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 4.8e-156 554.7 315 83.8
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.4e-155 553.1 321 81.6
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.8e-155 552.7 326 80.4
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 3.1e-155 552.0 331 80.4
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 7.0e-155 550.8 321 82.6
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 7.0e-155 550.8 325 81.2
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 9.1e-155 550.4 329 79.6
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 1.2e-154 550.1 324 81.2
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 2.0e-154 549.3 323 80.8
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 5.9e-154 547.7 330 80.0
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 5.9e-154 547.7 310 82.9
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 2.3e-153 545.8 329 79.6
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 2.9e-153 545.4 334 79.9
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 2.9e-153 545.4 329 79.3
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 2.9e-153 545.4 313 81.8
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 3.8e-153 545.0 317 80.8
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 5.0e-153 544.7 325 80.3
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 5.0e-153 544.7 321 80.7
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 6.5e-153 544.3 327 79.2
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 1.1e-152 543.5 333 79.3
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 1.5e-152 543.1 324 78.7
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 1.5e-152 543.1 328 78.4
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.9e-152 542.7 321 81.3
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.9e-152 542.7 314 80.3
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 2.5e-152 542.3 329 78.1
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 2.5e-152 542.3 322 81.1
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 4.2e-152 541.6 327 80.1
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 5.5e-152 541.2 316 80.7
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 9.5e-152 540.4 334 78.4
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 9.5e-152 540.4 334 78.4
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 1.2e-151 540.0 325 79.7
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 4.7e-151 538.1 316 80.1
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 4.7e-151 538.1 320 78.8
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 4.7e-151 538.1 320 78.8
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 6.1e-151 537.7 311 81.0
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 1.8e-150 536.2 319 81.5
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 2.3e-150 535.8 322 79.5
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 3.0e-150 535.4 300 85.0
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 1.2e-149 533.5 327 78.9
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 1.2e-149 533.5 327 78.9
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 1.5e-149 533.1 329 78.4
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 5.7e-149 531.2 316 79.1
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 9.8e-149 530.4 339 75.8
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 2.2e-148 529.3 317 80.4
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 1.8e-147 526.2 322 78.0
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 2.4e-147 525.8 385 69.1
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 7.0e-147 524.2 327 77.7
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 1.2e-146 523.5 326 75.5
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 6.4e-140 501.1 312 75.6
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 5.9e-138 494.6 304 77.3
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 1.1e-136 490.3 318 73.9
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.4e-134 483.4 278 81.7
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.4e-134 483.4 307 76.2
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 2.3e-134 482.6 266 85.3
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 4.0e-134 481.9 323 71.2
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 1.9e-131 473.0 306 72.9
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 4.3e-128 461.8 312 66.7
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 4.7e-127 458.4 308 69.2
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 8.1e-127 457.6 268 80.2
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 7.5e-125 451.1 308 67.9
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 7.5e-125 451.1 308 67.9
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 9.2e-123 444.1 306 66.7
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 1.1e-120 437.2 250 80.0
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 3.6e-119 432.2 338 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.8e-111 406.0 308 60.1
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.7e-105 386.7 235 79.6
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 7.3e-104 381.3 317 57.1
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 3.2e-91 339.3 215 74.0
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 4.2e-91 339.0 252 66.3
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 3.5e-90 335.9 323 48.6
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 1.1e-80 304.3 351 43.3
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 5.3e-70 268.9 361 40.4
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 5.5e-51 205.7 123 75.6
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 7.3e-27 125.6 82 79.3
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 4.7e-26 122.9 89 69.7
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-20 105.1 79 65.8
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 1.4e-17 94.7 66 68.2
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 2.5e-11 73.9 44 75.0
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 1.2e-10 71.6 53 67.9
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 1.4e-09 68.2 41 75.6
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 2.3e-09 67.4 45 71.1
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 3.2e-06 57.0 42 57.1


User provided reference genes

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