Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g203640 Pisum sativum HOM05D001538 ORTHO05D000007 1.0e-102 376.7 190 100.0
TPR.G16991 Trifolium pratense HOM05D001538 ORTHO05D000007 7.9e-34 147.9 112 63.4
TPR.G39566 Trifolium pratense HOM05D001538 ORTHO05D000007 3.9e-33 145.6 112 61.6
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 6.7e-33 144.8 112 62.5
TPR.G2656 Trifolium pratense HOM05D001538 ORTHO05D000007 3.3e-32 142.5 112 61.6
TPR.G19697 Trifolium pratense HOM05D001538 ORTHO05D004353 4.8e-31 138.7 103 64.1
Medtr4g045863 Medicago truncatula HOM05D001538 ORTHO05D000007 6.3e-31 138.3 112 58.9
Medtr0488s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 2.4e-30 136.3 167 49.1
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 2.4e-30 136.3 112 57.1
Medtr8g104170 Medicago truncatula HOM05D001538 ORTHO05D000007 2.6e-29 132.9 112 57.1
TPR.G39675 Trifolium pratense HOM05D001538 ORTHO05D000007 5.9e-29 131.7 101 61.4
Medtr4g035630 Medicago truncatula HOM05D001538 ORTHO05D000007 2.9e-28 129.4 180 41.1
Psat7g061080 Pisum sativum HOM05D000003 ORTHO05D000006 4.2e-27 125.6 121 52.9
Psat3g124560 Pisum sativum HOM05D001538 ORTHO05D000007 9.3e-27 124.4 112 56.2
Psat3g128360 Pisum sativum HOM05D001538 ORTHO05D000007 1.6e-26 123.6 112 54.5
Medtr8g104770 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-26 123.2 117 50.4
TPR.G28466 Trifolium pratense HOM05D001538 ORTHO05D000007 3.5e-26 122.5 98 60.2
TPR.G25770 Trifolium pratense HOM05D001538 ORTHO05D000007 2.3e-25 119.8 111 48.6
Psat7g029600 Pisum sativum HOM05D001538 ORTHO05D000007 6.7e-25 118.2 119 48.7
Medtr5g046930 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-24 117.1 108 54.6
Psat4g055000 Pisum sativum HOM05D001538 ORTHO05D000007 1.5e-24 117.1 146 43.8
Psat7g193320 Pisum sativum HOM05D001538 ORTHO05D000007 1.5e-21 107.1 112 50.9
Psat4g074680 Pisum sativum HOM05D001538 ORTHO05D000007 5.0e-20 102.1 103 48.5
TPR.G21298 Trifolium pratense HOM05D001538 ORTHO05D000007 8.5e-20 101.3 97 46.4
TPR.G21276 Trifolium pratense HOM05D001538 ORTHO05D000007 1.4e-17 94.0 117 39.3
Medtr5g037520 Medicago truncatula HOM05D001538 ORTHO05D000007 3.9e-17 92.4 161 33.5
Medtr7g006745 Medicago truncatula HOM05D001538 ORTHO05D000007 5.1e-17 92.0 171 38.0
Lalb_Chr13g0290751 Lupinus albus HOM05D000003 ORTHO05D000004 7.4e-16 88.2 112 40.2
Psat1g196920 Pisum sativum HOM05D001538 ORTHO05D000007 9.7e-16 87.8 88 48.9
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 1.3e-15 87.4 116 39.7
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 1.7e-15 87.0 116 39.7
Lalb_Chr07g0194691 Lupinus albus HOM05D001538 ORTHO05D000007 2.2e-15 86.7 112 39.3
Medtr7g111460 Medicago truncatula HOM05D001538 ORTHO05D000007 6.3e-15 85.1 112 40.2
PSO541G3845 Papaver somniferum HOM05D001538 ORTHO05D000007 1.1e-14 84.3 105 44.8
Medtr3g465060 Medicago truncatula HOM05D001538 ORTHO05D000007 1.8e-14 83.6 97 45.4
TPR.G35977 Trifolium pratense HOM05D001538 ORTHO05D000007 2.4e-14 83.2 118 37.3
Medtr8g466790 Medicago truncatula HOM05D001538 ORTHO05D000007 5.3e-14 82.0 119 40.3
Medtr0195s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 6.9e-14 81.6 116 37.1
Medtr0195s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 6.9e-14 81.6 116 37.1
Medtr3g079805 Medicago truncatula HOM05D001538 ORTHO05D000007 9.1e-14 81.3 107 40.2
Medtr7g445700 Medicago truncatula HOM05D001538 ORTHO05D000007 9.1e-14 81.3 117 35.9
PSO675G8250 Papaver somniferum HOM05D001538 ORTHO05D000007 1.2e-13 80.9 105 41.9
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-13 80.5 112 41.1
TPR.G18365 Trifolium pratense HOM05D001538 ORTHO05D000007 2.6e-13 79.7 107 39.3
Medtr6g022050 Medicago truncatula HOM05D001538 ORTHO05D000007 3.4e-13 79.3 116 38.8
TPR.G19027 Trifolium pratense HOM05D001538 ORTHO05D000007 5.9e-13 78.6 124 37.1
Medtr6g049130 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-12 77.8 103 41.7
TPR.G40148 Trifolium pratense HOM05D001538 ORTHO05D000007 1.7e-12 77.0 56 64.3
Phvul.001G160900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.9e-12 76.3 117 35.0
Psat1g010040 Pisum sativum HOM05D001538 ORTHO05D000006 2.9e-12 76.3 63 55.6
Lalb_Chr09g0334161 Lupinus albus HOM05D001538 ORTHO05D000007 3.8e-12 75.9 68 48.5
Medtr1g032820 Medicago truncatula HOM05D001538 ORTHO05D000007 3.8e-12 75.9 117 36.8
TPR.G23606 Trifolium pratense HOM05D001538 ORTHO05D000007 5.0e-12 75.5 116 37.1
Medtr2g064630 Medicago truncatula HOM05D001538 ORTHO05D000007 6.5e-12 75.1 87 40.2
Medtr1g041005 Medicago truncatula HOM05D001538 ORTHO05D000007 8.5e-12 74.7 120 34.2
Medtr6g471850 Medicago truncatula HOM05D001538 ORTHO05D000007 8.5e-12 74.7 104 40.4
TPR.G7611 Trifolium pratense HOM05D001538 ORTHO05D000007 8.5e-12 74.7 112 34.8
Medtr2g031910 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-11 73.9 116 34.5
Medtr1g040935 Medicago truncatula HOM05D001538 ORTHO05D000007 2.5e-11 73.2 116 34.5
TPR.G14439 Trifolium pratense HOM05D000092 ORTHO05D000042 2.5e-11 73.2 102 41.2
FvH4_4g05601 Fragaria vesca HOM05D001538 ORTHO05D000007 1.2e-10 70.9 104 36.5
Phvul.008G032300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.2e-10 70.9 84 39.3
TPR.G977 Trifolium pratense HOM05D001538 ORTHO05D016346 1.2e-10 70.9 115 38.3
Medtr0012s0140 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-10 70.5 124 33.1
Psat4g039840 Pisum sativum HOM05D001538 ORTHO05D000007 1.6e-10 70.5 106 39.6
Medtr3g062250 Medicago truncatula HOM05D027863 ORTHO05D000007 2.1e-10 70.1 117 33.3
Medtr6g038330 Medicago truncatula HOM05D041717 ORTHO05D000007 2.1e-10 70.1 111 36.0
Medtr8g445450 Medicago truncatula HOM05D001538 ORTHO05D000007 2.7e-10 69.7 116 32.8
TPR.G37617 Trifolium pratense HOM05D001538 ORTHO05D000007 6.1e-10 68.6 76 42.1
Aqoxy7G02367 Aquilegia oxysepala HOM05D000024 ORTHO05D000007 1.0e-09 67.8 118 36.4
PSO478G0075 Papaver somniferum HOM05D002145 ORTHO05D000007 1.0e-09 67.8 116 36.2
PSO832G2304 Papaver somniferum HOM05D002145 ORTHO05D000007 1.0e-09 67.8 92 40.2
Medtr4g046100 Medicago truncatula HOM05D001538 ORTHO05D000007 1.8e-09 67.0 96 40.6
Phvul.004G102400 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.8e-09 67.0 76 40.8
Aqoxy4G02901 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 3.9e-09 65.9 116 31.0
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 3.9e-09 65.9 112 33.0
Psat5g016360 Pisum sativum HOM05D000004 ORTHO05D000002 3.9e-09 65.9 114 36.0
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 5.1e-09 65.5 112 33.9
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 5.1e-09 65.5 112 33.9
PSO210G7043 Papaver somniferum HOM05D002145 ORTHO05D000007 5.1e-09 65.5 123 32.5
Medtr3g086820 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-08 64.3 112 32.1
Lj9C305T8 Lonicera japonica HOM05D001538 ORTHO05D000007 1.5e-08 63.9 107 26.2
Lju427A2T11 Lonicera japonica HOM05D001538 ORTHO05D000007 1.5e-08 63.9 112 31.2
TPR.G21617 Trifolium pratense HOM05D001538 ORTHO05D000007 1.5e-08 63.9 117 35.0
Aqoxy4G00128 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 2.0e-08 63.5 116 30.2
Aqoxy5G03703 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 2.0e-08 63.5 121 32.2
Lj1C330G10 Lonicera japonica HOM05D001538 ORTHO05D000007 2.0e-08 63.5 96 34.4
Lj7P482T20 Lonicera japonica HOM05D001538 ORTHO05D000007 2.0e-08 63.5 96 34.4
PSO210G6043 Papaver somniferum HOM05D000003 ORTHO05D000006 2.0e-08 63.5 93 35.5
PSO339G0173 Papaver somniferum HOM05D002145 ORTHO05D000007 2.0e-08 63.5 92 35.9
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 2.6e-08 63.2 83 38.6
FvH4_2g26101 Fragaria vesca HOM05D001538 ORTHO05D000007 3.3e-08 62.8 119 36.1
Aqoxy1G01858 Aquilegia oxysepala HOM05D000072 ORTHO05D000026 4.4e-08 62.4 124 35.5
Medtr0098s0100 Medicago truncatula HOM05D001538 ORTHO05D000007 4.4e-08 62.4 150 29.3
PSO782G3951 Papaver somniferum HOM05D000003 ORTHO05D000006 4.4e-08 62.4 106 33.0
Psat1g101960 Pisum sativum HOM05D000003 ORTHO05D000007 4.4e-08 62.4 120 32.5
TPR.G25048 Trifolium pratense HOM05D001538 ORTHO05D000007 5.7e-08 62.0 124 34.7
RcHm_v2.0_Chr3g0453631 Rosa chinensis HOM05D001538 ORTHO05D000007 7.4e-08 61.6 118 34.7
TPR.G32743 Trifolium pratense HOM05D001538 ORTHO05D000007 7.4e-08 61.6 100 36.0
Lj4A836T53 Lonicera japonica HOM05D001538 ORTHO05D000007 9.7e-08 61.2 113 30.1
TPR.G38827 Trifolium pratense HOM05D001538 ORTHO05D000007 9.7e-08 61.2 88 35.2
Lj3P676T23 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-07 60.8 117 27.4
Psat1g141600 Pisum sativum HOM05D001538 ORTHO05D000007 1.3e-07 60.8 76 39.5
FvH4_7g19511 Fragaria vesca HOM05D001538 ORTHO05D000007 1.7e-07 60.5 113 34.5
PSO017G7360 Papaver somniferum HOM05D002145 ORTHO05D000007 1.7e-07 60.5 101 34.7
Aqoxy2G00535 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 2.2e-07 60.1 121 30.6
Aqoxy2G01513 Aquilegia oxysepala HOM05D000024 ORTHO05D000007 2.2e-07 60.1 133 30.8
Aqoxy3G02984 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 2.8e-07 59.7 118 33.1
PSO339G2570 Papaver somniferum HOM05D000003 ORTHO05D000006 2.8e-07 59.7 139 32.4
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 3.7e-07 59.3 113 31.0
Lju2566P0T17 Lonicera japonica HOM05D001538 ORTHO05D000007 3.7e-07 59.3 51 49.0
Aqoxy1G02954 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 4.8e-07 58.9 115 29.6
Aqoxy2G01856 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 4.8e-07 58.9 124 29.8
Lj5P781T15 Lonicera japonica HOM05D001538 ORTHO05D000007 6.3e-07 58.5 82 29.3
Lju1953C0G19 Lonicera japonica HOM05D001538 ORTHO05D000007 6.3e-07 58.5 117 30.8
Medtr4g108010 Medicago truncatula HOM05D001538 ORTHO05D000007 6.3e-07 58.5 72 37.5
PSO017G2631 Papaver somniferum HOM05D002145 ORTHO05D000007 6.3e-07 58.5 92 38.0
Lj8C741G12 Lonicera japonica HOM05D001538 ORTHO05D000007 8.2e-07 58.2 96 34.4
PSO478G2421 Papaver somniferum HOM05D002145 ORTHO05D000007 8.2e-07 58.2 92 37.0
PSO782G1200 Papaver somniferum HOM05D002145 ORTHO05D000007 8.2e-07 58.2 92 37.0
Psat0s1735g0080 Pisum sativum HOM05D001538 ORTHO05D000007 8.2e-07 58.2 111 33.3
Psat3g116120 Pisum sativum HOM05D001538 ORTHO05D000007 8.2e-07 58.2 71 38.0
Aqoxy5G03278 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 1.1e-06 57.8 106 32.1
FvH4_7g13962 Fragaria vesca HOM05D001538 ORTHO05D000007 1.4e-06 57.4 120 31.7
Medtr5g024590 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-06 57.4 99 33.3
PSO063G3449 Papaver somniferum HOM05D002145 ORTHO05D000007 1.4e-06 57.4 113 30.1
Medtr5g065660 Medicago truncatula HOM05D001538 ORTHO05D000007 1.8e-06 57.0 125 31.2
PSO782G2697 Papaver somniferum HOM05D002145 ORTHO05D000007 1.8e-06 57.0 92 34.8
PSO170G4869 Papaver somniferum HOM05D002145 ORTHO05D000007 2.4e-06 56.6 93 33.3
Aqoxy7G02800 Aquilegia oxysepala HOM05D000024 ORTHO05D000007 4.1e-06 55.8 109 31.2
Lju2422C0T10 Lonicera japonica HOM05D001538 ORTHO05D000007 4.1e-06 55.8 80 37.5
PSO063G5176 Papaver somniferum HOM05D002145 ORTHO05D000007 4.1e-06 55.8 104 30.8
PSO782G0226 Papaver somniferum HOM05D002145 ORTHO05D000007 4.1e-06 55.8 92 35.9
Aqoxy5G01605 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.3e-06 55.5 108 31.5
Lju41C61G11 Lonicera japonica HOM05D001538 ORTHO05D000007 5.3e-06 55.5 82 37.8
Medtr8g040870 Medicago truncatula HOM05D001538 ORTHO05D000007 5.3e-06 55.5 110 30.9
PSO017G3459 Papaver somniferum HOM05D002145 ORTHO05D000007 5.3e-06 55.5 93 34.4
PSO832G0745 Papaver somniferum HOM05D000003 ORTHO05D000006 5.3e-06 55.5 92 34.8
Medtr5g085370 Medicago truncatula HOM05D001538 ORTHO05D000007 7.0e-06 55.1 92 35.9
Medtr7g070750 Medicago truncatula HOM05D001538 ORTHO05D000007 7.0e-06 55.1 79 35.4
Psat5g123120 Pisum sativum HOM05D001538 ORTHO05D000007 7.0e-06 55.1 42 59.5
Lj8P741T37 Lonicera japonica HOM05D001538 ORTHO05D000007 9.1e-06 54.7 116 28.4
PSO782G5088 Papaver somniferum HOM05D002145 ORTHO05D000007 9.1e-06 54.7 165 26.7
PSO832G4414 Papaver somniferum HOM05D002145 ORTHO05D000006 9.1e-06 54.7 92 37.0


User provided reference genes

Program Settings