Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g202480 Pisum sativum HOM05D000528 ORTHO05D325852 1.9e-121 439.1 214 100.0
Psat2g000400 Pisum sativum HOM05D000528 ORTHO05D000999 2.0e-30 136.7 113 61.9
Medtr5g099310 Medicago truncatula HOM05D000528 ORTHO05D000999 1.7e-24 117.1 115 56.5
TPR.G18631 Trifolium pratense HOM05D000528 ORTHO05D000999 3.5e-22 109.4 115 54.8
Ca_06507_v3 Cicer arietinum L. HOM05D000528 ORTHO05D000999 3.0e-21 106.3 116 54.3
arahy.Tifrunner.gnm1.ann1.9EA0XY Arachis hypogaea HOM05D000528 ORTHO05D000999 2.5e-20 103.2 116 50.9
arahy.Tifrunner.gnm1.ann1.I95U6T Arachis hypogaea HOM05D000528 ORTHO05D000999 2.5e-20 103.2 116 50.9
Glyma.14G000300 Glycine max HOM05D000528 ORTHO05D000999 7.3e-20 101.7 116 50.9
Lalb_Chr04g0246891 Lupinus albus HOM05D000528 ORTHO05D000999 1.2e-19 100.9 104 54.8
Glyma.02G312200 Glycine max HOM05D000528 ORTHO05D000999 2.1e-19 100.1 119 48.7
Phvul.008G293100 Phaseolus vulgaris HOM05D000528 ORTHO05D000999 8.1e-19 98.2 116 49.1
Lalb_Chr10g0107731 Lupinus albus HOM05D000528 ORTHO05D000999 4.0e-18 95.9 103 54.4
Psat6g019360 Pisum sativum HOM05D001046 ORTHO05D005883 5.2e-18 95.5 84 59.5
LjContig00081g0024847 Lotus japonicus HOM05D000528 ORTHO05D000999 1.7e-16 90.5 116 47.4
VMungo0647G0119 Vigna mungo HOM05D000528 ORTHO05D000999 1.9e-15 87.0 116 45.7
MD10G1143300 Malus domestica HOM05D000528 ORTHO05D000999 6.0e-14 82.0 116 41.4
Prupe.8G182200 Prunus persica HOM05D000528 ORTHO05D000999 1.0e-13 81.3 105 44.8
Potri.009G169800 Populus trichocarpa HOM05D000528 ORTHO05D000999 1.7e-13 80.5 113 38.1
CANSAT25G0393 Cannabis sativa HOM05D000528 ORTHO05D000999 3.0e-13 79.7 115 41.7
Duzib248G0733 Durio zibethinus HOM05D000528 ORTHO05D000999 3.3e-12 76.3 103 38.8
MD05G1143400 Malus domestica HOM05D000528 ORTHO05D000999 4.3e-12 75.9 97 41.2
QL11p056832 Quercus lobata HOM05D000528 ORTHO05D000999 5.6e-12 75.5 90 41.1
Dinv14187 Davidia involucrata HOM05D000528 ORTHO05D000999 9.6e-12 74.7 95 40.0
Actinidia26325 Actinidia chinensis HOM05D000528 ORTHO05D000999 4.7e-11 72.4 87 43.7
Sabra04G0140400 Salix brachista HOM05D000528 ORTHO05D000999 4.7e-11 72.4 103 38.8
CiPaw.06G113900 Carya illinoinensis HOM05D000528 ORTHO05D000999 6.2e-11 72.0 92 43.5
FAN27G0212 Fragaria x ananassa HOM05D000528 ORTHO05D000999 6.2e-11 72.0 115 37.4
SalBow5G3559 Salvia bowleyana HOM05D000528 ORTHO05D000999 6.2e-11 72.0 78 44.9
Haze_01955 Corylus avellana HOM05D000528 ORTHO05D000999 1.1e-10 71.2 106 38.7
CsaV3_7G002160 Cucumis sativus L. HOM05D000528 ORTHO05D000999 1.1e-10 71.2 81 42.0
Oeu025016.1 Olea europaea HOM05D000528 ORTHO05D000999 1.1e-10 71.2 115 38.3
RcHm_v2.0_Chr6g0281241 Rosa chinensis HOM05D000528 ORTHO05D000999 1.4e-10 70.9 97 38.1
FvH4_2g17050 Fragaria vesca HOM05D000528 ORTHO05D000999 1.8e-10 70.5 115 36.5
FAN24G2253 Fragaria x ananassa HOM05D000528 ORTHO05D000999 1.8e-10 70.5 115 36.5
Ciclev10027671m.g Citrus clementina HOM05D000528 ORTHO05D000999 2.4e-10 70.1 104 35.6
Duzib052G1203 Durio zibethinus HOM05D000528 ORTHO05D000999 3.1e-10 69.7 116 32.8
Gohir.A04G111200 Gossypium hirsutum HOM05D000528 ORTHO05D000999 3.1e-10 69.7 116 31.9
FAN15G2552 Fragaria x ananassa HOM05D000528 ORTHO05D000999 4.0e-10 69.3 107 37.4
Thecc.02G148200 Theobroma cacao HOM05D000528 ORTHO05D000999 4.0e-10 69.3 116 32.8
MELO3C015692.2 Cucumis melo HOM05D000528 ORTHO05D000999 5.2e-10 68.9 81 39.5
Gohir.D04G151500 Gossypium hirsutum HOM05D000528 ORTHO05D000999 5.2e-10 68.9 113 32.7
Gorai.012G138200 Gossypium raimondii HOM05D000528 ORTHO05D000999 5.2e-10 68.9 113 32.7
SalBow5G2253 Salvia bowleyana HOM05D000528 ORTHO05D000999 8.9e-10 68.2 97 37.1
Gohir.D12G013000 Gossypium hirsutum HOM05D000528 ORTHO05D000999 1.5e-09 67.4 113 34.5
Gorai.008G013100 Gossypium raimondii HOM05D000528 ORTHO05D000999 1.5e-09 67.4 113 34.5
Sed0019498 Sechium edule HOM05D000528 ORTHO05D000999 1.5e-09 67.4 81 39.5
CiPaw.05G095200 Carya illinoinensis HOM05D000528 ORTHO05D000999 2.0e-09 67.0 91 39.6
Gohir.A12G012500 Gossypium hirsutum HOM05D000528 ORTHO05D000999 2.0e-09 67.0 216 28.2
Manes.15G114000 Manihot esculenta HOM05D000528 ORTHO05D000999 2.0e-09 67.0 116 34.5
Atru.chr5.3581 Acer truncatum HOM05D000528 ORTHO05D000999 2.6e-09 66.6 107 38.3
ClCG02G003230 Citrullus lanatus HOM05D000528 ORTHO05D000999 2.6e-09 66.6 81 39.5
GSVIVG01023854001 Vitis vinifera HOM05D000528 ORTHO05D000999 3.4e-09 66.2 81 42.0
Eucgr.I01543 Eucalyptus grandis HOM05D000528 ORTHO05D000999 4.4e-09 65.9 99 36.4
vmacro10880 Vaccinium macrocarpon HOM05D000528 ORTHO05D000999 4.4e-09 65.9 83 39.8
TAR381G1720 Trochodendron aralioides HOM05D000528 ORTHO05D000999 5.8e-09 65.5 108 37.0
Peaxi162Scf00362g00022 Petunia axillaris HOM05D000528 ORTHO05D000999 7.6e-09 65.1 87 40.2
PGR142G3048 Punica granatum HOM05D000528 ORTHO05D000999 7.6e-09 65.1 131 34.4
Aqoxy6G02996 Aquilegia oxysepala HOM05D000528 ORTHO05D000999 9.9e-09 64.7 86 39.5
Duzib132G0712 Durio zibethinus HOM05D000528 ORTHO05D000999 1.3e-08 64.3 112 31.2
Nn5g31050 Nelumbo nucifera HOM05D000528 ORTHO05D000999 1.3e-08 64.3 191 29.3
TWI79G1344 Tripterygium wilfordii HOM05D000528 ORTHO05D000999 1.3e-08 64.3 95 37.9
Nitab4.5_0009851g0010 Nicotiana tabacum HOM05D000528 ORTHO05D000999 2.2e-08 63.5 87 40.2
MSTRG.27607 Avicennia marina HOM05D000528 ORTHO05D000999 4.9e-08 62.4 97 34.0
Potri.004G208400 Populus trichocarpa HOM05D000528 ORTHO05D000999 4.9e-08 62.4 107 32.7
Migut.N01366 Erythranthe guttata HOM05D000528 ORTHO05D000999 6.4e-08 62.0 91 38.5
Nitab4.5_0001220g0130 Nicotiana tabacum HOM05D000528 ORTHO05D000999 6.4e-08 62.0 87 40.2
Sabra09G0131600 Salix brachista HOM05D000528 ORTHO05D000999 8.4e-08 61.6 95 35.8
Aa31LG6G16910 Aethionema arabicum HOM05D000528 ORTHO05D000999 1.1e-07 61.2 91 36.3
Sed0020334 Sechium edule HOM05D000528 ORTHO05D000999 1.1e-07 61.2 82 37.8
Solyc01g112350.3 Solanum lycopersicum HOM05D000528 ORTHO05D000999 1.4e-07 60.8 87 37.9
Sopen01g054440 Solanum pennellii HOM05D000528 ORTHO05D000999 1.4e-07 60.8 87 37.9
CAN.G1645.12 Capsicum annuum HOM05D000528 ORTHO05D000999 1.9e-07 60.5 87 37.9
ECA233G2528 Erigeron canadensis HOM05D000528 ORTHO05D000999 1.9e-07 60.5 95 35.8
Lj5C170G20 Lonicera japonica HOM05D000528 ORTHO05D000999 1.9e-07 60.5 95 35.8
CARHR293970 Cardamine hirsuta HOM05D000528 ORTHO05D000999 3.2e-07 59.7 86 34.9
THA.LOC104804077 Tarenaya hassleriana HOM05D000528 ORTHO05D000999 3.2e-07 59.7 104 34.6
Lj9A409G88 Lonicera japonica HOM05D000528 ORTHO05D000999 4.2e-07 59.3 84 34.5
PSO675G4154 Papaver somniferum HOM05D000528 ORTHO05D000999 4.2e-07 59.3 116 33.6
SGA_v2.0_scaffold98G29311 Striga asiatica HOM05D000528 ORTHO05D000999 5.4e-07 58.9 99 32.3
MBI01_g28405_MAGBIO Magnolia biondii HOM05D000528 ORTHO05D000999 7.1e-07 58.5 79 38.0
PSO541G5174 Papaver somniferum HOM05D000528 ORTHO05D000999 7.1e-07 58.5 116 34.5
BcaNung01999 Brassica carinata HOM05D000528 ORTHO05D000999 9.3e-07 58.2 100 35.0
Carub.0007s0009 Capsella rubella HOM05D000528 ORTHO05D000999 9.3e-07 58.2 86 34.9
Thhalv10024199m.g Eutrema salsugineum HOM05D000528 ORTHO05D000999 9.3e-07 58.2 105 34.3
BNapus_Darmor_BZH_scaffold_146p00040 Brassica napus HOM05D000528 ORTHO05D000999 1.2e-06 57.8 86 34.9
BolC7t46797H Brassica oleracea HOM05D000528 ORTHO05D000999 1.2e-06 57.8 86 34.9
Gorai.005G215900 Gossypium raimondii HOM05D000528 ORTHO05D000999 1.2e-06 57.8 108 32.4
Sp7g37550 Schrenkiella parvula HOM05D000528 ORTHO05D000999 1.2e-06 57.8 105 32.4
Gohir.D13G057801 Gossypium hirsutum HOM05D000528 ORTHO05D000999 1.6e-06 57.4 91 30.8
Gorai.013G065100 Gossypium raimondii HOM05D000528 ORTHO05D000999 1.6e-06 57.4 77 37.7
Cc09_g10920 Coffea canephora HOM05D000528 ORTHO05D000999 2.7e-06 56.6 98 33.7
Gohir.D02G193100 Gossypium hirsutum HOM05D000528 ORTHO05D000999 2.7e-06 56.6 108 31.5
BraA06t27780Z Brassica rapa HOM05D000528 ORTHO05D000999 3.5e-06 56.2 86 33.7
DCAR_005427 Daucus carota HOM05D000528 ORTHO05D000999 3.5e-06 56.2 99 33.3
AL7G10100 Arabidopsis lyrata HOM05D000528 ORTHO05D000999 4.6e-06 55.8 86 34.9
Psat7g011720 Pisum sativum HOM05D000081 ORTHO05D004978 4.6e-06 55.8 60 53.3
EL10Ac9g21558 Beta vulgaris HOM05D000528 ORTHO05D000999 6.0e-06 55.5 92 35.9


User provided reference genes

Program Settings