Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 8.4e-238 826.6 420 100.0
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 5.5e-197 691.0 407 84.8
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 5.7e-194 681.0 407 84.3
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 1.2e-191 673.3 409 83.1
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 3.9e-174 615.1 407 77.9
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 1.0e-166 590.5 400 75.2
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 1.5e-165 586.6 405 74.6
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 1.6e-164 583.2 406 73.6
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 5.2e-163 578.2 404 74.0
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 1.0e-158 563.9 400 71.5
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 2.5e-141 506.1 408 65.4
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 2.1e-140 503.1 411 65.2
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 6.4e-129 464.9 409 58.7
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 6.4e-129 464.9 368 62.8
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 1.2e-127 460.7 366 61.2
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 1.6e-127 460.3 420 59.5
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 2.1e-127 459.9 366 63.4
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 1.0e-126 457.6 408 58.1
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 3.9e-126 455.7 398 57.8
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 3.3e-125 452.6 381 59.8
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 2.8e-124 449.5 406 58.6
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 4.8e-124 448.7 390 57.7
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 2.4e-123 446.4 381 58.5
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 3.1e-123 446.0 400 57.0
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 3.1e-123 446.0 380 59.5
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 4.0e-123 445.7 397 56.7
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 1.5e-122 443.7 393 56.5
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 3.4e-122 442.6 380 58.7
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 3.4e-122 442.6 380 59.2
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 4.5e-122 442.2 416 56.5
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 5.8e-122 441.8 383 59.0
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.1e-120 437.6 369 60.2
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 5.5e-120 435.3 455 51.9
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 2.1e-119 433.3 410 57.3
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 8.7e-118 427.9 417 55.9
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 8.7e-118 427.9 395 57.0
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 9.7e-117 424.5 383 56.7
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 4.8e-116 422.2 402 55.7
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 6.3e-116 421.8 340 62.1
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 1.3e-113 414.1 388 56.4
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 8.5e-113 411.4 388 52.6
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 1.1e-112 411.0 366 57.9
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 3.2e-112 409.5 362 59.1
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 4.2e-112 409.1 394 56.6
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 9.3e-112 407.9 417 53.5
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.1e-109 401.0 362 58.8
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 2.5e-109 399.8 410 51.7
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 3.3e-109 399.4 395 53.7
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 7.4e-109 398.3 405 52.3
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 2.2e-108 396.7 410 51.5
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 6.3e-108 395.2 416 50.2
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 8.2e-108 394.8 373 58.4
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 8.2e-108 394.8 414 51.2
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 1.1e-107 394.4 400 51.5
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 1.8e-107 393.7 410 51.7
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 2.4e-107 393.3 410 50.7
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 4.1e-107 392.5 417 50.1
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 5.3e-107 392.1 408 52.9
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 1.5e-106 390.6 356 55.9
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 2.0e-106 390.2 387 52.5
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 2.6e-106 389.8 385 53.5
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 3.4e-106 389.4 411 50.9
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 3.4e-106 389.4 373 52.8
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 4.5e-106 389.0 416 51.7
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 5.9e-106 388.7 369 51.8
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 2.2e-105 386.7 400 50.2
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 3.8e-105 386.0 415 51.6
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 6.5e-105 385.2 392 52.6
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 8.5e-105 384.8 391 52.2
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 1.9e-104 383.6 361 54.6
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 3.2e-104 382.9 413 50.6
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 5.5e-104 382.1 389 50.9
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 7.2e-104 381.7 369 54.5
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 7.9e-103 378.3 414 51.0
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 1.1e-101 374.4 366 53.3
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 2.6e-101 373.2 416 50.2
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 4.4e-101 372.5 411 50.6
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 2.8e-100 369.8 410 49.5
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 4.5e-98 362.5 351 52.4
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.3e-97 360.9 351 51.9
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 5.0e-97 359.0 449 47.0
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 8.5e-97 358.2 362 50.8
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 8.5e-97 358.2 370 52.4
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 1.6e-95 354.0 429 45.9
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 5.2e-94 349.0 403 48.6
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 7.0e-91 338.6 375 47.7
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 2.7e-87 326.6 339 50.4
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 3.0e-86 323.2 323 53.6
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 4.4e-85 319.3 337 49.6
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 1.7e-81 307.4 236 63.1
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 5.4e-75 285.8 391 42.5
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 2.5e-72 276.9 365 42.7
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 1.0e-70 271.6 244 54.5
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 1.5e-69 267.7 298 46.3
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 3.5e-66 256.5 270 45.6
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 2.9e-65 253.4 212 59.4
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 4.7e-63 246.1 212 55.2
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 2.3e-54 217.2 203 53.2
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 8.9e-54 215.3 247 47.0
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 1.9e-51 207.6 326 38.7
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 6.0e-50 202.6 413 34.9
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.1e-48 198.4 364 34.3
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 2.0e-45 187.6 373 32.7
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 5.8e-37 159.5 350 30.6
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 7.3e-24 115.9 353 28.9
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 2.8e-23 114.0 209 32.5
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 6.0e-18 96.3 125 48.0
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 8.7e-17 92.4 324 26.2
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 5.3e-14 83.2 65 63.1
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 1.3e-12 78.6 67 58.2
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 2.5e-11 74.3 89 48.3
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.2e-10 72.0 73 54.8


User provided reference genes

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