Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g197880 Pisum sativum HOM05D005280 ORTHO05D006253 1.3e-84 317.4 249 100.0
Ca_00439_v3 Cicer arietinum L. HOM05D005280 ORTHO05D006253 2.9e-81 306.2 249 96.0
Medtr2g016160 Medicago truncatula HOM05D005280 ORTHO05D006253 5.5e-80 302.0 249 94.8
Phvul.006G175800 Phaseolus vulgaris HOM05D005280 ORTHO05D006253 5.7e-77 292.0 249 92.8
Glyma.13G229400 Glycine max HOM05D005280 ORTHO05D006253 7.4e-77 291.6 249 92.0
Lj6g0027668 Lotus japonicus HOM05D005280 ORTHO05D006253 1.7e-73 280.4 249 89.6
MELO3C007211.2 Cucumis melo HOM05D005280 ORTHO05D006253 5.0e-73 278.9 248 91.5
arahy.Tifrunner.gnm1.ann1.8U8ZZM Arachis hypogaea HOM05D005280 ORTHO05D006253 6.5e-73 278.5 249 90.0
arahy.Tifrunner.gnm1.ann1.IM81E3 Arachis hypogaea HOM05D005280 ORTHO05D006253 6.5e-73 278.5 249 90.0
Dinv40681 Davidia involucrata HOM05D005280 ORTHO05D006253 8.5e-73 278.1 248 90.7
Glyma.15G083100 Glycine max HOM05D005280 ORTHO05D006253 8.5e-73 278.1 143 90.9
ClCG01G023770 Citrullus lanatus HOM05D005280 ORTHO05D006253 1.4e-72 277.3 248 91.1
CsaV3_6G050930 Cucumis sativus L. HOM05D005280 ORTHO05D006253 1.4e-72 277.3 248 91.1
Lalb_Chr20g0117481 Lupinus albus HOM05D005280 ORTHO05D006253 1.9e-72 276.9 249 89.6
Dinv16775 Davidia involucrata HOM05D005280 ORTHO05D006253 4.2e-72 275.8 248 89.9
VMungo0540G1202 Vigna mungo HOM05D005280 ORTHO05D006253 5.5e-72 275.4 143 90.9
CiPaw.10G059400 Carya illinoinensis HOM05D005280 ORTHO05D006253 6.1e-71 271.9 248 88.3
Prupe.4G062000 Prunus persica HOM05D005280 ORTHO05D006253 3.0e-70 269.6 254 86.6
Cfa000612 Carpinus fangiana HOM05D005280 ORTHO05D006253 3.9e-70 269.2 248 87.9
Potri.004G057600 Populus trichocarpa HOM05D005280 ORTHO05D006253 3.9e-70 269.2 248 87.5
FAN25G0161 Fragaria x ananassa HOM05D005280 ORTHO05D006253 6.7e-70 268.5 249 87.6
FAN11G1284 Fragaria x ananassa HOM05D005280 ORTHO05D006253 8.8e-70 268.1 249 86.7
FAN16G3700 Fragaria x ananassa HOM05D005280 ORTHO05D006253 8.8e-70 268.1 249 87.1
Ciclev10015974m.g Citrus clementina HOM05D005280 ORTHO05D006253 1.1e-69 267.7 249 88.0
FAN21G3704 Fragaria x ananassa HOM05D005280 ORTHO05D006253 1.1e-69 267.7 249 86.7
PGR042G3394 Punica granatum HOM05D005280 ORTHO05D006253 1.5e-69 267.3 248 85.9
RcHm_v2.0_Chr5g0010881 Rosa chinensis HOM05D005280 ORTHO05D006253 2.0e-69 266.9 250 87.6
FvH4_3g07730 Fragaria vesca HOM05D005280 ORTHO05D006253 2.6e-69 266.5 249 87.1
Haze_06226 Corylus avellana HOM05D005280 ORTHO05D006253 3.3e-69 266.2 248 87.5
vmacro16064 Vaccinium macrocarpon HOM05D005280 ORTHO05D006253 5.7e-69 265.4 244 90.2
MD10G1279400 Malus domestica HOM05D005280 ORTHO05D006253 7.4e-69 265.0 254 85.8
Hma1.2p1_1912F.1_g307320 Hydrangea macrophylla HOM05D005280 ORTHO05D006253 9.7e-69 264.6 244 88.5
Manes.16G040400 Manihot esculenta HOM05D005280 ORTHO05D006253 9.7e-69 264.6 248 85.1
Manes.17G056200 Manihot esculenta HOM05D005280 ORTHO05D006253 1.3e-68 264.2 248 84.7
ECA236G4327 Erigeron canadensis HOM05D005280 ORTHO05D006253 1.7e-68 263.8 248 86.7
Atru.chr10.1658 Acer truncatum HOM05D005280 ORTHO05D006253 2.2e-68 263.5 249 86.3
QL05p047377 Quercus lobata HOM05D005280 ORTHO05D006253 2.8e-68 263.1 248 85.1
THA.LOC104812639 Tarenaya hassleriana HOM05D005280 ORTHO05D006253 2.8e-68 263.1 248 87.1
MD05G1300300 Malus domestica HOM05D005280 ORTHO05D006253 3.7e-68 262.7 256 84.4
Aa31LG6G6330 Aethionema arabicum HOM05D005280 ORTHO05D006253 6.3e-68 261.9 249 87.1
CANSAT80G2107 Cannabis sativa HOM05D005280 ORTHO05D006253 1.1e-67 261.2 143 83.9
Sabra04G0037300 Salix brachista HOM05D005280 ORTHO05D006253 1.4e-67 260.8 248 85.9
TWI38G0304 Tripterygium wilfordii HOM05D005280 ORTHO05D006253 1.4e-67 260.8 248 85.9
Rhsim02G0143200 Rhododendron simsii HOM05D005280 ORTHO05D006253 1.8e-67 260.4 244 88.9
HanXRQChr05g0139841 Helianthus annuus HOM05D005280 ORTHO05D006253 3.1e-67 259.6 248 85.9
Lsat_1_v5_gn_7_24160 Lactuca sativa HOM05D005280 ORTHO05D006253 3.1e-67 259.6 247 86.6
Sed0011601 Sechium edule HOM05D005280 ORTHO05D006253 9.1e-67 258.1 143 84.6
Sc05g0007070 Simmondsia chinensis HOM05D005280 ORTHO05D006253 2.0e-66 256.9 248 82.7
PGSC0003DMG400008719 Solanum tuberosum HOM05D005280 ORTHO05D006253 2.0e-66 256.9 248 86.3
Solyc03g062940.3 Solanum lycopersicum HOM05D005280 ORTHO05D006253 2.6e-66 256.5 248 86.3
Sopen03g015240 Solanum pennellii HOM05D005280 ORTHO05D006253 2.6e-66 256.5 248 86.3
Actinidia39510 Actinidia chinensis HOM05D005280 ORTHO05D006253 5.9e-66 255.4 242 87.6
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 7.7e-66 255.0 248 85.9
PGSC0003DMG400009000 Solanum tuberosum HOM05D005280 ORTHO05D006253 7.7e-66 255.0 248 85.9
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 1.0e-65 254.6 248 85.9
Peaxi162Scf00871g00047 Petunia axillaris HOM05D005280 ORTHO05D006253 2.2e-65 253.4 248 85.9
Sp1g25120 Schrenkiella parvula HOM05D005280 ORTHO05D006253 2.9e-65 253.1 249 85.5
CARHR028510 Cardamine hirsuta HOM05D005280 ORTHO05D006253 3.8e-65 252.7 249 85.1
THA.LOC104804949 Tarenaya hassleriana HOM05D005280 ORTHO05D006253 3.8e-65 252.7 248 84.7
DCAR_007943 Daucus carota HOM05D005280 ORTHO05D006253 5.0e-65 252.3 143 81.1
Duzib160G0285 Durio zibethinus HOM05D005280 ORTHO05D006253 8.5e-65 251.5 249 84.7
Thhalv10008237m.g Eutrema salsugineum HOM05D005280 ORTHO05D006253 8.5e-65 251.5 249 84.7
Carub.0001s2739 Capsella rubella HOM05D005280 ORTHO05D006253 1.5e-64 250.8 249 84.7
AUR62017603 Chenopodium quinoa HOM05D005280 ORTHO05D006253 1.9e-64 250.4 249 83.5
SHI28515 Sapria himalayana HOM05D005280 ORTHO05D006253 1.9e-64 250.4 248 83.5
CAN.G206.30 Capsicum annuum HOM05D005280 ORTHO05D006253 2.5e-64 250.0 248 84.7
AT1G29260 Arabidopsis thaliana HOM05D005280 ORTHO05D006253 3.2e-64 249.6 249 84.7
BcaC05g26943 Brassica carinata HOM05D005280 ORTHO05D006253 3.2e-64 249.6 249 84.7
A09p37140 Brassica napus HOM05D005280 ORTHO05D006253 3.2e-64 249.6 249 84.7
C05p27910 Brassica napus HOM05D005280 ORTHO05D006253 3.2e-64 249.6 249 84.7
BolC5t31517H Brassica oleracea HOM05D005280 ORTHO05D006253 3.2e-64 249.6 249 84.7
BraA09t39230Z Brassica rapa HOM05D005280 ORTHO05D006253 3.2e-64 249.6 249 84.7
AUR62015144 Chenopodium quinoa HOM05D005280 ORTHO05D006253 5.5e-64 248.8 249 83.5
Cc02_g15040 Coffea canephora HOM05D005280 ORTHO05D006253 7.2e-64 248.4 146 80.8
CSS0022801 Camellia sinensis var. sinensis HOM05D005280 ORTHO05D006253 1.2e-63 247.7 143 78.3
Ah.01g013480 Amaranthus hybridus HOM05D005280 ORTHO05D006253 1.6e-63 247.3 249 81.9
Lj1A206T60 Lonicera japonica HOM05D005280 ORTHO05D006253 2.7e-63 246.5 143 77.6
SGA_v2.0_scaffold1G00053 Striga asiatica HOM05D005280 ORTHO05D006253 3.6e-63 246.1 248 83.1
COL.COLO4_31288 Corchorus olitorius HOM05D005280 ORTHO05D006253 8.0e-63 245.0 144 79.9
Duzib192G0183 Durio zibethinus HOM05D005280 ORTHO05D006253 1.4e-62 244.2 144 80.6
unitig_699.g19366 Utricularia gibba HOM05D005280 ORTHO05D006253 1.8e-62 243.8 248 82.3
Aqoxy170s003 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 2.3e-62 243.4 143 77.6
Aqoxy7G03216 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 2.3e-62 243.4 143 77.6
Gohir.A10G036800 Gossypium hirsutum HOM05D005280 ORTHO05D006253 4.0e-62 242.7 143 79.7
MBI05_g10770_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 5.2e-62 242.3 143 76.9
Nn1g04427 Nelumbo nucifera HOM05D005280 ORTHO05D006253 6.7e-62 241.9 143 78.3
BcaC01g00082 Brassica carinata HOM05D005280 ORTHO05D006253 8.8e-62 241.5 143 78.3
C03p75590 Brassica napus HOM05D005280 ORTHO05D006253 8.8e-62 241.5 143 78.3
BolC3t19816H Brassica oleracea HOM05D005280 ORTHO05D006253 8.8e-62 241.5 143 78.3
Thecc.06G170100 Theobroma cacao HOM05D005280 ORTHO05D006253 8.8e-62 241.5 144 79.9
Gohir.D10G037400 Gossypium hirsutum HOM05D005280 ORTHO05D006253 1.1e-61 241.1 143 79.0
BcaB07g32507 Brassica carinata HOM05D005280 ORTHO05D006253 1.5e-61 240.7 143 77.6
MBI07_g43934_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 1.5e-61 240.7 143 76.9
BraA08t34477Z Brassica rapa HOM05D005280 ORTHO05D006253 2.0e-61 240.4 143 77.6
TAR629G2088 Trochodendron aralioides HOM05D005280 ORTHO05D006253 2.0e-61 240.4 143 75.5
Gorai.011G039400 Gossypium raimondii HOM05D005280 ORTHO05D006253 2.6e-61 240.0 143 78.3
EL10Ac9g22853 Beta vulgaris HOM05D005280 ORTHO05D006253 7.5e-61 238.4 143 76.2
BcaB03g12145 Brassica carinata HOM05D005280 ORTHO05D006253 7.5e-61 238.4 143 77.6
MSTRG.7412 Avicennia marina HOM05D005280 ORTHO05D006253 1.3e-60 237.7 143 78.3
AL1G42940 Arabidopsis lyrata HOM05D005280 ORTHO05D006253 1.7e-60 237.3 144 77.8
HPP92_008751 Vanilla planifolia HOM05D005280 ORTHO05D006253 1.7e-60 237.3 248 81.0
PSO229G0003 Papaver somniferum HOM05D005280 ORTHO05D006253 3.7e-60 236.1 144 75.7
Migut.M01035 Erythranthe guttata HOM05D005280 ORTHO05D006253 8.2e-60 235.0 143 75.5
PSO675G8759 Papaver somniferum HOM05D005280 ORTHO05D006253 2.4e-59 233.4 144 74.3
CDE10G0374 Ceratophyllum demersum HOM05D005280 ORTHO05D006253 5.9e-58 228.8 143 73.4
Mapoly0030s0014 Marchantia polymorpha HOM05D005280 ORTHO05D006253 5.9e-50 202.2 143 63.6
PSO782G3364 Papaver somniferum HOM05D005280 ORTHO05D006253 4.4e-45 186.0 115 72.2
SMO119G0322 Selaginella moellendorffii HOM05D005280 ORTHO05D006253 5.7e-45 185.7 143 60.8
Pp3c17_8040 Physcomitrium patens HOM05D005280 ORTHO05D006253 9.8e-45 184.9 143 56.6
Cpa.g.sc7.74 Carica papaya HOM05D005280 ORTHO05D006253 2.2e-44 183.7 248 75.4
A08p25250 Brassica napus HOM05D005280 ORTHO05D006253 3.7e-44 183.0 143 62.2
Zm00001eb238680 Zea mays HOM05D005280 ORTHO05D006253 8.3e-44 181.8 144 56.2
Cre17.g730200 Chlamydomonas reinhardtii HOM05D005280 ORTHO05D006253 3.5e-42 176.4 139 58.3
Sabra11G0048200 Salix brachista HOM05D005280 ORTHO05D006253 1.1e-40 171.4 205 82.9
Aqoxy1G02047 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 3.3e-40 169.9 106 74.5
AagrBONN_evm.TU.Sc2ySwM_117.3414 Anthoceros agrestis HOM05D005280 ORTHO05D006253 6.1e-39 165.6 143 55.9
SEGI_31924 Sequoiadendron giganteum HOM05D005280 ORTHO05D006253 1.8e-35 154.1 111 66.7
PRCOL_00004365 Prasinoderma coloniale HOM05D005280 ORTHO05D006253 2.0e-34 150.6 110 62.7
CBR_g23503 Chara braunii HOM05D005280 ORTHO05D006253 5.9e-34 149.1 141 52.5
MCO15G120 Micromonas commoda HOM05D005280 ORTHO05D006253 3.1e-30 136.7 109 56.0
Pp3c15_2410 Physcomitrium patens HOM05D005280 ORTHO05D006253 1.4e-27 127.9 131 45.0
ATR0706G060 Amborella trichopoda HOM05D005280 ORTHO05D006253 1.9e-27 127.5 114 54.4
AUR62034161 Chenopodium quinoa HOM05D005280 ORTHO05D006253 8.9e-22 108.6 143 41.3
MBI16_g15539_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 2.7e-18 97.1 143 38.5
MBI16_g15538_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 2.1e-15 87.4 143 35.7
Dinv41375 Davidia involucrata HOM05D000140 ORTHO05D000087 2.6e-13 80.5 120 42.5
FAN14G0286 Fragaria x ananassa HOM05D005280 ORTHO05D019446 7.6e-13 79.0 124 41.9
VMungo1383G1864 Vigna mungo HOM05D005280 ORTHO05D006253 6.0e-10 69.3 35 85.7
Potri.011G066600 Populus trichocarpa HOM05D005280 ORTHO05D006253 7.8e-10 68.9 137 78.1
VMungo0331G0944 Vigna mungo HOM05D005280 ORTHO05D006253 1.0e-09 68.6 136 77.9
Cfa022092 Carpinus fangiana HOM05D000164 ORTHO05D121826 1.4e-06 58.2 74 40.5


User provided reference genes

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