Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 9.3e-136 486.9 247 100.0
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 8.5e-121 437.2 247 88.3
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 9.4e-112 407.1 243 84.0
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 6.7e-110 401.0 243 82.3
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 9.1e-107 390.6 248 79.4
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 5.9e-106 387.9 248 79.0
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 5.2e-102 374.8 247 74.5
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 2.4e-99 365.9 249 75.1
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 1.7e-97 359.8 236 76.3
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 6.8e-94 347.8 237 75.1
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 7.0e-91 337.8 248 68.1
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 2.0e-90 336.3 247 68.4
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 2.7e-90 335.9 246 68.7
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 5.5e-88 328.2 248 66.1
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 5.7e-85 318.2 247 65.2
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.3e-84 317.0 244 64.8
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 3.1e-83 312.4 233 66.1
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 7.0e-83 311.2 247 61.9
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 2.7e-82 309.3 249 65.9
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 5.9e-82 308.1 249 63.1
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 1.0e-81 307.4 249 65.1
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 2.9e-81 305.8 249 62.2
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.1e-80 303.9 243 62.6
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 3.6e-79 298.9 236 61.9
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 1.5e-77 293.5 248 60.9
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 4.4e-77 292.0 234 60.3
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.1e-75 287.3 249 58.2
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 3.2e-75 285.8 244 57.8
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 9.2e-75 284.3 220 61.4
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 2.0e-74 283.1 237 58.2
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 4.6e-74 282.0 235 58.7
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 4.6e-74 282.0 250 58.0
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 8.6e-73 277.7 216 61.6
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 1.5e-72 276.9 249 57.4
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 9.5e-72 274.2 249 57.0
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 9.5e-72 274.2 195 72.3
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 3.6e-71 272.3 248 55.2
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 6.1e-71 271.6 253 56.1
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 8.0e-71 271.2 257 55.3
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 1.0e-70 270.8 238 55.9
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.4e-70 270.4 238 55.5
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.4e-70 270.4 238 55.5
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.3e-70 269.6 238 55.9
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 2.3e-70 269.6 223 60.1
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 4.0e-70 268.9 215 59.5
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 4.0e-70 268.9 215 59.5
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 8.9e-70 267.7 244 55.3
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 2.0e-69 266.5 239 56.1
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.6e-69 266.2 238 55.5
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 7.5e-69 264.6 224 58.0
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.7e-68 263.5 240 55.0
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 1.7e-68 263.5 221 59.3
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 2.2e-68 263.1 223 59.2
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 2.9e-68 262.7 210 59.0
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 4.9e-68 261.9 239 53.6
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 8.3e-68 261.2 222 58.6
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 5.4e-67 258.5 224 56.2
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.9e-64 250.0 234 51.3
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 2.5e-64 249.6 244 53.7
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 5.2e-62 241.9 217 57.1
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 6.8e-62 241.5 210 54.8
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 9.8e-61 237.7 247 49.8
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.7e-60 236.9 234 49.1
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 1.4e-59 233.8 187 63.1
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 2.4e-59 233.0 229 51.1
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 4.6e-58 228.8 221 52.5
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.3e-57 227.3 240 50.0
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 3.9e-57 225.7 237 51.1
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 1.1e-56 224.2 239 48.5
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 4.3e-56 222.2 236 47.5
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 1.4e-54 217.2 201 55.7
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 4.4e-53 212.2 246 48.8
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 5.8e-53 211.8 241 48.5
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 7.6e-53 211.5 229 47.6
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 2.2e-52 209.9 236 46.6
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 1.1e-51 207.6 213 51.6
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 2.4e-51 206.5 182 58.8
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.0e-49 201.1 237 41.4
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 7.3e-48 194.9 232 44.0
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 7.3e-48 194.9 158 63.3
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 1.4e-46 190.7 239 41.0
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 6.8e-46 188.3 224 40.6
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 5.8e-45 185.3 241 42.7
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 3.9e-33 146.0 156 46.2
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 9.6e-32 141.4 149 46.3
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 1.1e-30 137.9 173 43.9
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 1.2e-26 124.4 90 66.7
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 1.3e-25 120.9 80 70.0
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 3.5e-18 96.3 106 43.4
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 3.3e-16 89.7 170 30.6
SEGI_07596 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 5.7e-08 62.4 207 23.2


User provided reference genes

Program Settings