Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g191760 Pisum sativum HOM05D005606 ORTHO05D006446 8.9e-193 676.8 348 100.0
Medtr2g018830 Medicago truncatula HOM05D005606 ORTHO05D006446 2.2e-175 619.0 348 90.5
Ca_00517_v3 Cicer arietinum L. HOM05D005606 ORTHO05D006446 4.6e-165 584.7 354 85.9
Lj6g0007906 Lotus japonicus HOM05D005606 ORTHO05D006446 2.6e-160 568.9 352 82.7
Lalb_Chr20g0117701 Lupinus albus HOM05D005606 ORTHO05D006446 4.6e-157 558.1 352 80.1
Glyma.15G091800 Glycine max HOM05D005606 ORTHO05D006446 7.7e-152 540.8 352 76.7
Phvul.006G167500 Phaseolus vulgaris HOM05D005606 ORTHO05D006446 1.2e-149 533.5 352 76.7
arahy.Tifrunner.gnm1.ann1.XD6SW7 Arachis hypogaea HOM05D005606 ORTHO05D006446 1.0e-148 530.4 352 75.6
arahy.Tifrunner.gnm1.ann1.P0FE7Q Arachis hypogaea HOM05D005606 ORTHO05D006446 6.7e-148 527.7 352 75.6
Glyma.13G220600 Glycine max HOM05D005606 ORTHO05D006446 6.7e-148 527.7 353 75.9
arahy.Tifrunner.gnm1.ann1.KIB2TD Arachis hypogaea HOM05D000001 ORTHO05D006446 1.1e-139 500.4 335 74.6
VMungo0540G1265 Vigna mungo HOM05D005606 ORTHO05D006446 1.3e-138 496.9 333 75.4
arahy.Tifrunner.gnm1.ann1.J0D3J2 Arachis hypogaea HOM05D005606 ORTHO05D006446 2.8e-138 495.7 334 74.6
Medtr8g008810 Medicago truncatula HOM05D005606 ORTHO05D006446 3.0e-132 475.7 322 76.7
CiPaw.09G118900 Carya illinoinensis HOM05D005606 ORTHO05D006446 9.1e-129 464.2 353 67.1
Medtr8g007580 Medicago truncatula HOM05D005606 ORTHO05D006446 1.5e-126 456.8 349 70.5
Dinv09771 Davidia involucrata HOM05D005606 ORTHO05D006446 2.7e-125 452.6 354 65.0
Cfa000886 Carpinus fangiana HOM05D005606 ORTHO05D006446 6.1e-125 451.4 358 65.6
Prupe.4G086400 Prunus persica HOM05D005606 ORTHO05D006446 5.7e-123 444.9 352 63.6
Eucgr.K02306 Eucalyptus grandis HOM05D005606 ORTHO05D006446 9.8e-123 444.1 353 62.6
Atru.chr9.366 Acer truncatum HOM05D005606 ORTHO05D006446 1.3e-122 443.7 356 63.8
Sabra01G0009700 Salix brachista HOM05D005606 ORTHO05D006446 2.4e-121 439.5 353 64.6
Potri.001G013300 Populus trichocarpa HOM05D005606 ORTHO05D006446 4.1e-121 438.7 353 64.3
MD05G1278400 Malus domestica HOM05D005606 ORTHO05D006446 7.0e-121 438.0 352 62.8
Thecc.03G071900 Theobroma cacao HOM05D005606 ORTHO05D006446 9.1e-121 437.6 353 63.7
Lj5A166G73 Lonicera japonica HOM05D005606 ORTHO05D006446 1.6e-120 436.8 354 62.7
Manes.15G103000 Manihot esculenta HOM05D005606 ORTHO05D006446 3.5e-120 435.6 348 62.6
Manes.03G090364 Manihot esculenta HOM05D005606 ORTHO05D006446 4.5e-120 435.3 353 63.2
Nn4g24861 Nelumbo nucifera HOM05D005606 ORTHO05D006446 1.7e-119 433.3 354 62.4
TWI81G0505 Tripterygium wilfordii HOM05D005606 ORTHO05D006446 3.8e-119 432.2 353 62.3
CANSAT35G0050 Cannabis sativa HOM05D005606 ORTHO05D006446 6.5e-119 431.4 352 62.5
Ciclev10023713m.g Citrus clementina HOM05D005606 ORTHO05D006446 8.5e-119 431.0 351 63.0
PGSC0003DMG400025630 Solanum tuberosum HOM05D005606 ORTHO05D006446 1.5e-118 430.3 354 63.0
GSVIVG01012914001 Vitis vinifera HOM05D005606 ORTHO05D006446 2.5e-118 429.5 352 63.6
Gohir.A08G038700 Gossypium hirsutum HOM05D005606 ORTHO05D006446 3.2e-118 429.1 353 63.5
Sed0002755 Sechium edule HOM05D005606 ORTHO05D006446 4.2e-118 428.7 350 61.7
Cpa.g.sc111.40 Carica papaya HOM05D005606 ORTHO05D006446 2.1e-117 426.4 352 61.4
Cc04_g08790 Coffea canephora HOM05D005606 ORTHO05D006446 2.7e-117 426.0 352 61.9
CsaV3_6G052120 Cucumis sativus L. HOM05D005606 ORTHO05D006446 3.6e-117 425.6 350 61.1
MELO3C007099.2 Cucumis melo HOM05D005606 ORTHO05D006446 6.1e-117 424.9 350 61.1
Rhsim08G0124400 Rhododendron simsii HOM05D005606 ORTHO05D006446 8.0e-117 424.5 356 61.2
ClCG01G024960 Citrullus lanatus HOM05D005606 ORTHO05D006446 1.0e-116 424.1 350 61.4
PGR044G1587 Punica granatum HOM05D005606 ORTHO05D006446 1.0e-116 424.1 350 60.6
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 1.4e-116 423.7 349 63.0
SalBow5G2126 Salvia bowleyana HOM05D005606 ORTHO05D006446 1.4e-116 423.7 354 61.3
Gorai.004G048400 Gossypium raimondii HOM05D005606 ORTHO05D006446 1.8e-116 423.3 353 62.6
RcHm_v2.0_Chr5g0015011 Rosa chinensis HOM05D005606 ORTHO05D006446 1.8e-116 423.3 352 60.2
CSS0018749 Camellia sinensis var. sinensis HOM05D005606 ORTHO05D006446 2.3e-116 422.9 354 60.2
QL05p054675 Quercus lobata HOM05D005606 ORTHO05D006446 4.0e-116 422.2 490 49.4
Sopen03g029090 Solanum pennellii HOM05D005606 ORTHO05D006446 4.0e-116 422.2 354 62.4
Duzib211G0450 Durio zibethinus HOM05D005606 ORTHO05D006446 5.2e-116 421.8 353 62.9
Sed0004896 Sechium edule HOM05D005606 ORTHO05D006446 5.2e-116 421.8 350 61.1
Aqoxy3G04204 Aquilegia oxysepala HOM05D005606 ORTHO05D006446 1.5e-115 420.2 354 61.9
Solyc03g098340.4 Solanum lycopersicum HOM05D005606 ORTHO05D006446 2.0e-115 419.9 354 61.9
FAN16G3646 Fragaria x ananassa HOM05D005606 ORTHO05D006446 3.4e-115 419.1 352 59.9
FAN25G1117 Fragaria x ananassa HOM05D005606 ORTHO05D006446 5.7e-115 418.3 352 59.9
FvH4_3g04970 Fragaria vesca HOM05D005606 ORTHO05D006446 9.8e-115 417.5 352 59.7
Gohir.D08G048900 Gossypium hirsutum HOM05D005606 ORTHO05D006446 9.8e-115 417.5 353 62.0
FAN11G2201 Fragaria x ananassa HOM05D005606 ORTHO05D006446 1.3e-114 417.2 352 59.4
FAN21G0753 Fragaria x ananassa HOM05D005606 ORTHO05D006446 2.8e-114 416.0 352 59.4
MD10G1257000 Malus domestica HOM05D005606 ORTHO05D006446 1.2e-112 410.6 353 60.1
SGA_v2.0_scaffold90G27762 Striga asiatica HOM05D005606 ORTHO05D006446 4.5e-112 408.7 354 59.9
PSO782G3878 Papaver somniferum HOM05D005606 ORTHO05D006446 2.3e-111 406.4 353 59.2
PSO063G0483 Papaver somniferum HOM05D005606 ORTHO05D006446 5.0e-111 405.2 353 59.2
MSTRG.11550 Avicennia marina HOM05D005606 ORTHO05D006446 4.3e-110 402.1 354 60.2
Oeu023545.1 Olea europaea HOM05D005606 ORTHO05D006446 1.2e-109 400.6 352 59.1
EL10Ac8g19487 Beta vulgaris HOM05D005606 ORTHO05D006446 2.3e-108 396.4 352 55.7
AUR62041591 Chenopodium quinoa HOM05D005606 ORTHO05D006446 8.9e-108 394.4 352 57.1
Migut.O00253 Erythranthe guttata HOM05D005606 ORTHO05D006446 2.6e-107 392.9 355 56.9
Oeu038484.2 Olea europaea HOM05D005606 ORTHO05D006446 1.3e-106 390.6 388 52.8
Sc04g0004710 Simmondsia chinensis HOM05D005606 ORTHO05D006446 3.7e-106 389.0 349 57.0
Hund06728 Selenicereus undatus HOM05D005606 ORTHO05D006446 4.9e-106 388.7 352 57.1
DCAR_010217 Daucus carota HOM05D005606 ORTHO05D006446 5.4e-105 385.2 349 57.6
THA.LOC104810627 Tarenaya hassleriana HOM05D005606 ORTHO05D006446 3.9e-103 379.0 350 57.1
Actinidia37370 Actinidia chinensis HOM05D005606 ORTHO05D006446 5.6e-102 375.2 319 61.4
Peaxi162Scf00171g00427 Petunia axillaris HOM05D005606 ORTHO05D006446 1.6e-101 373.6 307 63.5
Ah.14g085920 Amaranthus hybridus HOM05D005606 ORTHO05D001302 1.4e-100 370.5 362 53.3
CDE04G0503 Ceratophyllum demersum HOM05D005606 ORTHO05D006446 1.2e-99 367.5 353 53.3
Lsat_1_v5_gn_8_221 Lactuca sativa HOM05D005606 ORTHO05D006446 6.4e-98 361.7 357 55.7
Nitab4.5_0004612g0090 Nicotiana tabacum HOM05D005606 ORTHO05D006446 6.4e-98 361.7 349 57.6
Sp5g28210 Schrenkiella parvula HOM05D005606 ORTHO05D006446 1.1e-97 360.9 349 55.0
Thhalv10018404m.g Eutrema salsugineum HOM05D005606 ORTHO05D006446 2.4e-97 359.8 349 54.7
AL2G33010 Arabidopsis lyrata HOM05D005606 ORTHO05D006446 7.8e-96 354.8 349 54.7
BcaC08g46742 Brassica carinata HOM05D005606 ORTHO05D006446 7.8e-96 354.8 346 53.2
C06p47380 Brassica napus HOM05D005606 ORTHO05D006446 1.0e-95 354.4 346 53.5
BolC6t39777H Brassica oleracea HOM05D005606 ORTHO05D006446 1.0e-95 354.4 346 53.5
A07p39190 Brassica napus HOM05D005606 ORTHO05D006446 1.3e-95 354.0 346 53.2
BraA07t31468Z Brassica rapa HOM05D005606 ORTHO05D006446 1.3e-95 354.0 346 53.2
AT1G73240 Arabidopsis thaliana HOM05D005606 ORTHO05D006446 2.3e-95 353.2 349 54.2
BcaB03g15036 Brassica carinata HOM05D005606 ORTHO05D006446 5.0e-95 352.1 346 52.6
CARHR066250 Cardamine hirsuta HOM05D005606 ORTHO05D006446 6.6e-95 351.7 347 54.2
TPR.G7652 Trifolium pratense HOM05D005606 ORTHO05D006446 6.6e-95 351.7 192 90.1
SEGI_11499 Sequoiadendron giganteum HOM05D005606 ORTHO05D006446 1.1e-94 350.9 361 52.4
Carub.0002s2004 Capsella rubella HOM05D005606 ORTHO05D006446 7.3e-94 348.2 349 54.2
HanXRQChr05g0141141 Helianthus annuus HOM05D005606 ORTHO05D006446 2.3e-92 343.2 353 51.8
Aa31LG4G3530 Aethionema arabicum HOM05D005606 ORTHO05D006446 5.2e-92 342.0 346 52.6
CDE02G0130 Ceratophyllum demersum HOM05D005606 ORTHO05D006446 1.5e-86 323.9 335 51.3
Potri.003G213050 Populus trichocarpa HOM05D005606 ORTHO05D006446 1.1e-76 291.2 281 57.7
Zm00001eb250810 Zea mays HOM05D005606 ORTHO05D006446 1.7e-74 283.9 352 44.6
AagrBONN_evm.TU.Sc2ySwM_228.2052 Anthoceros agrestis HOM05D005606 ORTHO05D006446 2.1e-72 276.9 361 42.7
Pp3c23_16320 Physcomitrium patens HOM05D005606 ORTHO05D006446 7.3e-70 268.5 362 42.8
Mapoly0061s0120 Marchantia polymorpha HOM05D005606 ORTHO05D006446 1.1e-68 264.6 346 44.2
MBI06_g39886_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 2.4e-65 253.4 273 53.1
Os02g0684300 Oryza sativa ssp. japonica HOM05D005606 ORTHO05D006446 1.2e-64 251.1 260 51.2
TAR629G2351 Trochodendron aralioides HOM05D005606 ORTHO05D006446 1.3e-63 247.7 187 66.8
SMO358G0536 Selaginella moellendorffii HOM05D005606 ORTHO05D006446 9.6e-62 241.5 357 40.6
Zm00001eb187400 Zea mays HOM05D005606 ORTHO05D006446 1.4e-60 237.7 350 38.3
Nitab4.5_0001180g0240 Nicotiana tabacum HOM05D005606 ORTHO05D006446 7.6e-59 231.9 349 40.4
TPR.G20455 Trifolium pratense HOM05D005606 ORTHO05D006446 1.0e-55 221.5 119 95.0
vmacro17739 Vaccinium macrocarpon HOM05D005606 ORTHO05D006446 1.8e-55 220.7 188 58.5
Lj9C350G3 Lonicera japonica HOM05D005606 ORTHO05D006446 6.7e-55 218.8 258 46.1
MBI06_g21907_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 7.4e-54 215.3 258 51.2
AUR62042457 Chenopodium quinoa HOM05D005606 ORTHO05D006446 2.1e-53 213.8 186 58.6
Hma1.2p1_0403F.1_g145190 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 1.1e-52 211.5 160 65.6
Hma1.2p1_0403F.1_g145180 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 1.8e-52 210.7 157 65.6
MBI06_g43804_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 1.0e-50 204.9 180 57.2
CBR_g11193 Chara braunii HOM05D005606 ORTHO05D006446 2.5e-49 200.3 369 37.1
ATR0824G067 Amborella trichopoda HOM05D005606 ORTHO05D006446 6.0e-48 195.7 196 53.6
ATR0879G001 Amborella trichopoda HOM05D005606 ORTHO05D006446 2.3e-47 193.7 180 55.0
Medtr8g008813 Medicago truncatula HOM05D005606 ORTHO05D006446 2.0e-43 180.6 147 69.4
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 2.6e-43 180.3 155 60.0
ATR0824G212 Amborella trichopoda HOM05D005606 ORTHO05D006446 3.3e-38 163.3 157 54.8
ECA233G5513 Erigeron canadensis HOM05D005606 ORTHO05D006446 2.8e-37 160.2 111 69.4
vmacro17738 Vaccinium macrocarpon HOM05D005606 ORTHO05D006446 2.0e-35 154.1 122 63.1
Medtr0199s0020 Medicago truncatula HOM05D005606 ORTHO05D006446 1.7e-29 134.4 128 62.5
unitig_750.g28452 Utricularia gibba HOM05D005606 ORTHO05D006446 3.7e-21 106.7 140 43.6
Aqoxy3G04211 Aquilegia oxysepala HOM05D005606 ORTHO05D006446 1.4e-15 88.2 91 50.5
Ah.15g099030 Amaranthus hybridus HOM05D002838 ORTHO05D002114 1.2e-14 85.1 112 48.2
Sabra03G0155900 Salix brachista HOM05D005606 ORTHO05D006446 1.2e-14 85.1 93 53.8
Sabra03G0159100 Salix brachista HOM05D005606 ORTHO05D006446 1.2e-14 85.1 93 53.8
Haze_05701 Corylus avellana HOM05D005606 ORTHO05D006446 2.2e-13 80.9 67 55.2
Medtr0199s0030 Medicago truncatula HOM05D005606 ORTHO05D006446 1.6e-08 64.7 42 73.8
Medtr8g007575 Medicago truncatula HOM05D005606 ORTHO05D006446 2.7e-08 63.9 55 65.5
Oeu061196.1 Olea europaea HOM05D005606 ORTHO05D006446 6.8e-07 59.3 95 40.0


User provided reference genes

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