Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 6.2e-126 454.1 229 100.0
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 1.1e-114 416.8 224 91.1
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 1.9e-111 406.0 229 89.1
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 3.7e-110 401.7 229 88.2
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 3.0e-104 382.1 229 81.7
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 5.6e-103 377.9 231 80.1
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 2.1e-102 375.9 229 79.5
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 1.5e-100 369.8 229 78.6
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 2.0e-92 342.8 227 74.0
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 4.5e-92 341.7 227 73.1
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 2.2e-91 339.3 227 72.2
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 8.5e-91 337.4 227 73.1
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 2.5e-90 335.9 229 69.4
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 2.5e-90 335.9 226 71.2
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 4.2e-90 335.1 227 71.4
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 2.7e-89 332.4 225 72.0
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 8.8e-88 327.4 225 69.8
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 3.3e-87 325.5 227 70.5
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 5.7e-87 324.7 227 68.7
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 9.7e-87 323.9 227 67.4
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 1.3e-86 323.6 224 69.2
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 1.3e-86 323.6 227 70.5
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.3e-86 323.6 227 68.7
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.7e-86 323.2 226 68.6
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.7e-86 323.2 227 67.4
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 2.8e-86 322.4 214 73.4
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 3.7e-86 322.0 226 67.3
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 4.8e-86 321.6 227 70.0
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 4.8e-86 321.6 213 72.8
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 4.8e-86 321.6 227 67.0
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 1.4e-85 320.1 227 68.7
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 1.4e-85 320.1 243 67.5
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 3.1e-85 318.9 226 68.6
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 6.9e-85 317.8 226 67.7
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 6.9e-85 317.8 227 68.7
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 1.2e-84 317.0 227 67.4
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 2.6e-84 315.8 227 69.2
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 3.4e-84 315.5 227 68.3
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 7.7e-84 314.3 227 69.6
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 1.0e-83 313.9 225 66.7
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 1.7e-83 313.2 223 67.3
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 8.5e-83 310.8 223 67.7
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 1.1e-82 310.5 229 67.2
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.4e-82 310.1 227 68.3
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 3.2e-82 308.9 225 64.9
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 5.5e-82 308.1 225 66.2
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 7.2e-82 307.8 227 64.8
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 9.4e-82 307.4 218 69.7
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.2e-81 307.0 227 67.4
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 6.1e-81 304.7 231 65.8
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 7.9e-81 304.3 226 63.7
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 1.8e-80 303.1 226 65.9
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 2.3e-80 302.8 227 65.2
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 2.3e-80 302.8 216 67.6
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 2.3e-80 302.8 227 64.3
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 2.3e-80 302.8 230 64.3
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 3.0e-80 302.4 228 64.9
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 3.0e-80 302.4 217 67.3
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 6.7e-80 301.2 227 64.8
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 1.1e-79 300.4 239 61.5
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 3.3e-79 298.9 228 63.2
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 3.3e-79 298.9 226 64.6
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 4.4e-79 298.5 228 62.7
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 4.4e-79 298.5 226 64.6
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 1.3e-78 297.0 227 62.6
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 1.3e-78 297.0 228 63.2
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 2.8e-78 295.8 227 62.1
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 2.8e-78 295.8 227 62.6
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 2.8e-78 295.8 227 62.6
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.8e-78 295.8 228 63.2
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 4.8e-78 295.0 228 62.7
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 6.3e-78 294.7 228 61.8
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 8.2e-78 294.3 227 62.1
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 1.4e-77 293.5 224 63.8
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 1.4e-77 293.5 227 61.7
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 4.5e-76 288.5 151 97.4
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 1.3e-75 287.0 231 61.9
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 5.0e-75 285.0 228 62.3
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 6.5e-75 284.6 228 61.0
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 6.5e-75 284.6 227 60.8
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 4.2e-74 282.0 228 60.5
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 5.5e-74 281.6 213 64.8
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 7.2e-74 281.2 223 61.4
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 3.6e-73 278.9 226 61.1
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 1.4e-72 276.9 229 61.1
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 5.2e-72 275.0 224 61.2
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 6.7e-72 274.6 210 62.9
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 7.4e-71 271.2 227 57.7
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 1.7e-70 270.0 227 59.5
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 3.7e-70 268.9 221 60.6
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 4.5e-68 261.9 215 60.5
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 5.9e-68 261.5 207 60.4
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 1.3e-67 260.4 209 59.8
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 1.4e-64 250.4 253 51.4
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 2.0e-60 236.5 223 54.3
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 2.1e-57 226.5 151 75.5
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 3.0e-56 222.6 117 96.6
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 1.7e-54 216.9 192 58.3
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 1.3e-51 207.2 217 48.8
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 3.3e-50 202.6 149 65.8
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 9.2e-45 184.5 224 44.2
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 5.0e-43 178.7 209 42.1
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.0e-40 171.0 225 46.2
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 5.2e-40 168.7 210 42.4
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 2.9e-38 162.9 130 57.7
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 5.4e-37 158.7 218 35.3
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 2.0e-36 156.8 146 53.4
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 3.5e-36 156.0 217 35.5
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 2.3e-32 143.3 218 34.9
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 4.9e-30 135.6 89 73.0
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 7.1e-29 131.7 108 58.3
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 8.6e-27 124.8 160 43.8
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 1.9e-21 107.1 72 68.1
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 3.9e-11 72.8 87 47.1
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 3.9e-11 72.8 87 47.1
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 3.1e-08 63.2 43 65.1
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 1.3e-06 57.8 34 70.6


User provided reference genes

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