Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g156640 Pisum sativum HOM05D008874 ORTHO05D012000 1.2e-61 240.0 152 100.0
Psat5g222280 Pisum sativum HOM05D008874 ORTHO05D012000 5.0e-15 85.1 84 69.0
Psat0s3645g0160 Pisum sativum HOM05D003396 ORTHO05D003646 9.5e-14 80.9 49 81.6
Psat7g194760 Pisum sativum HOM05D008874 ORTHO05D012000 6.1e-13 78.2 46 84.8
Psat4g073760 Pisum sativum HOM05D008874 ORTHO05D012000 1.8e-12 76.6 45 86.7
Psat1g185600 Pisum sativum HOM05D008874 ORTHO05D012000 5.7e-11 71.6 48 79.2
Psat3g013080 Pisum sativum HOM05D002981 ORTHO05D003725 5.7e-11 71.6 73 54.8
Psat6g033000 Pisum sativum HOM05D008874 ORTHO05D012000 5.7e-11 71.6 61 68.9
TPR.G1663 Trifolium pratense HOM05D002981 ORTHO05D003725 7.5e-11 71.2 86 47.7
Phvul.001G225600 Phaseolus vulgaris HOM05D002981 ORTHO05D003725 9.8e-11 70.9 86 46.5
Medtr7g112040 Medicago truncatula HOM05D002981 ORTHO05D003725 1.3e-10 70.5 86 48.8
Nitab4.5_0000368g0270 Nicotiana tabacum HOM05D002981 ORTHO05D003725 2.9e-10 69.3 73 52.1
Oeu064809.1 Olea europaea HOM05D002981 ORTHO05D003725 3.7e-10 68.9 73 52.1
Rhsim05G0133600 Rhododendron simsii HOM05D002981 ORTHO05D003725 3.7e-10 68.9 73 52.1
vmacro19723 Vaccinium macrocarpon HOM05D002981 ORTHO05D003725 3.7e-10 68.9 73 52.1
VMungo1383G3526 Vigna mungo HOM05D002981 ORTHO05D003725 3.7e-10 68.9 86 45.3
Nitab4.5_0009033g0020 Nicotiana tabacum HOM05D002981 ORTHO05D003725 6.4e-10 68.2 73 50.7
Psat6g210880 Pisum sativum HOM05D008874 ORTHO05D012000 6.4e-10 68.2 49 77.6
Ca_09297_v3 Cicer arietinum L. HOM05D002981 ORTHO05D003725 8.3e-10 67.8 86 45.3
Gorai.001G143100 Gossypium raimondii HOM05D002981 ORTHO05D003725 1.1e-09 67.4 86 45.3
Glyma.03G232000 Glycine max HOM05D002981 ORTHO05D003725 1.8e-09 66.6 86 45.3
PGR044G1530 Punica granatum HOM05D002981 ORTHO05D003725 1.8e-09 66.6 86 46.5
QL03p018289 Quercus lobata HOM05D002981 ORTHO05D003725 1.8e-09 66.6 72 52.8
Gohir.A08G118600 Gossypium hirsutum HOM05D002981 ORTHO05D003725 2.4e-09 66.2 73 50.7
Gohir.D08G139400 Gossypium hirsutum HOM05D002981 ORTHO05D003725 2.4e-09 66.2 73 50.7
Gorai.004G143300 Gossypium raimondii HOM05D002981 ORTHO05D003725 2.4e-09 66.2 73 50.7
Manes.09G175600 Manihot esculenta HOM05D002981 ORTHO05D003725 2.4e-09 66.2 73 49.3
Nn3g21634 Nelumbo nucifera HOM05D002981 ORTHO05D003725 2.4e-09 66.2 86 45.3
Phvul.007G215900 Phaseolus vulgaris HOM05D002981 ORTHO05D003725 2.4e-09 66.2 86 44.2
Oeu053701.1 Olea europaea HOM05D002981 ORTHO05D003725 3.2e-09 65.9 73 49.3
TWI56G0814 Tripterygium wilfordii HOM05D002981 ORTHO05D003725 3.2e-09 65.9 73 47.9
SHI12762 Sapria himalayana HOM05D002981 ORTHO05D003725 4.1e-09 65.5 73 49.3
Solyc01g100320.3 Solanum lycopersicum HOM05D002981 ORTHO05D003725 4.1e-09 65.5 85 47.1
VMungo0720G0399 Vigna mungo HOM05D002981 ORTHO05D003725 4.1e-09 65.5 86 43.0
Glyma.19G229000 Glycine max HOM05D002981 ORTHO05D003725 5.4e-09 65.1 86 44.2
Sopen01g043830 Solanum pennellii HOM05D002981 ORTHO05D003725 5.4e-09 65.1 85 45.9
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 7.0e-09 64.7 86 45.3
Nn4g25650 Nelumbo nucifera HOM05D002981 ORTHO05D003725 7.0e-09 64.7 86 45.3
PGSC0003DMG400002779 Solanum tuberosum HOM05D002981 ORTHO05D003725 7.0e-09 64.7 85 45.9
CsaV3_7G029820 Cucumis sativus L. HOM05D002981 ORTHO05D003725 9.2e-09 64.3 73 50.7
Gohir.D07G131800 Gossypium hirsutum HOM05D002981 ORTHO05D003725 9.2e-09 64.3 72 48.6
SGA_v2.0_scaffold80G25880 Striga asiatica HOM05D002981 ORTHO05D003725 9.2e-09 64.3 73 46.6
TAR633G1423 Trochodendron aralioides HOM05D002981 ORTHO05D003725 9.2e-09 64.3 70 51.4
Atru.chr5.1047 Acer truncatum HOM05D002981 ORTHO05D003725 1.2e-08 63.9 86 44.2
Lalb_Chr02g0146691 Lupinus albus HOM05D002981 ORTHO05D003725 1.2e-08 63.9 73 49.3
Peaxi162Scf00071g00438 Petunia axillaris HOM05D002981 ORTHO05D003725 1.2e-08 63.9 40 75.0
SGA_v2.0_scaffold81G26125 Striga asiatica HOM05D002981 ORTHO05D003725 1.2e-08 63.9 73 47.9
MSTRG.5139 Avicennia marina HOM05D002981 ORTHO05D003725 1.6e-08 63.5 73 47.9
Ca_10298_v3 Cicer arietinum L. HOM05D002981 ORTHO05D003725 1.6e-08 63.5 86 43.0
Peaxi162Scf00673g00127 Petunia axillaris HOM05D002981 ORTHO05D003725 1.6e-08 63.5 73 49.3
THA.LOC104817468 Tarenaya hassleriana HOM05D002981 ORTHO05D003725 1.6e-08 63.5 73 47.9
VMungo1127G0034 Vigna mungo HOM05D002981 ORTHO05D026216 1.6e-08 63.5 40 75.0
VMungo1383G0101 Vigna mungo HOM05D002981 ORTHO05D026216 1.6e-08 63.5 39 76.9
CSS0028783 Camellia sinensis var. sinensis HOM05D002981 ORTHO05D003725 2.0e-08 63.2 72 48.6
Duzib133G0744 Durio zibethinus HOM05D002981 ORTHO05D003725 2.0e-08 63.2 86 44.2
Glyma.10G014700 Glycine max HOM05D002981 ORTHO05D003725 2.0e-08 63.2 73 47.9
Rhsim11G0094000 Rhododendron simsii HOM05D002981 ORTHO05D003725 2.0e-08 63.2 73 47.9
Sc09g0002680 Simmondsia chinensis HOM05D002981 ORTHO05D003725 2.0e-08 63.2 73 47.9
Sc16g0008930 Simmondsia chinensis HOM05D002981 ORTHO05D003725 2.0e-08 63.2 78 44.9
TAR365G0113 Trochodendron aralioides HOM05D002981 ORTHO05D003725 2.0e-08 63.2 72 48.6
CAN.G1273.1 Capsicum annuum HOM05D002981 ORTHO05D003725 2.7e-08 62.8 85 44.7
Dinv24424 Davidia involucrata HOM05D002981 ORTHO05D003725 2.7e-08 62.8 73 47.9
Dinv30871 Davidia involucrata HOM05D002981 ORTHO05D003725 2.7e-08 62.8 72 48.6
TAR362G0641 Trochodendron aralioides HOM05D002981 ORTHO05D003725 2.7e-08 62.8 86 43.0
Zm00001eb131360 Zea mays HOM05D002981 ORTHO05D003725 2.7e-08 62.8 73 46.6
Cc02_g34820 Coffea canephora HOM05D002981 ORTHO05D003725 3.5e-08 62.4 86 41.9
Glyma.02G014000 Glycine max HOM05D002981 ORTHO05D003725 3.5e-08 62.4 86 43.0
Gohir.A07G127500 Gossypium hirsutum HOM05D002981 ORTHO05D003725 3.5e-08 62.4 86 43.0
Lj5A337G17 Lonicera japonica HOM05D002981 ORTHO05D003725 3.5e-08 62.4 86 41.9
Lj1g0022270 Lotus japonicus HOM05D002981 ORTHO05D003725 3.5e-08 62.4 85 47.1
Os01g0339900 Oryza sativa ssp. japonica HOM05D002981 ORTHO05D003725 3.5e-08 62.4 86 40.7
Prupe.6G315000 Prunus persica HOM05D002981 ORTHO05D003725 3.5e-08 62.4 73 49.3
QL12p028974 Quercus lobata HOM05D002981 ORTHO05D003725 3.5e-08 62.4 73 49.3
Duzib211G0560 Durio zibethinus HOM05D002981 ORTHO05D003725 4.6e-08 62.0 86 44.2
Gohir.A12G126400 Gossypium hirsutum HOM05D002981 ORTHO05D003725 4.6e-08 62.0 73 47.9
Gorai.008G141100 Gossypium raimondii HOM05D002981 ORTHO05D003725 4.6e-08 62.0 73 47.9
MD04G1195300 Malus domestica HOM05D002981 ORTHO05D003725 4.6e-08 62.0 73 47.9
Psat6g163280 Pisum sativum HOM05D002981 ORTHO05D003725 4.6e-08 62.0 86 43.0
MD12G1207400 Malus domestica HOM05D002981 ORTHO05D003725 5.9e-08 61.6 73 46.6
Sed0023511 Sechium edule HOM05D002981 ORTHO05D003725 5.9e-08 61.6 73 46.6
VMungo0331G1919 Vigna mungo HOM05D002981 ORTHO05D026216 5.9e-08 61.6 40 72.5
Aqoxy2G02802 Aquilegia oxysepala HOM05D002981 ORTHO05D003725 7.8e-08 61.2 73 46.6
arahy.Tifrunner.gnm1.ann1.FDR7V2 Arachis hypogaea HOM05D002981 ORTHO05D003725 7.8e-08 61.2 86 41.9
arahy.Tifrunner.gnm1.ann1.VAQ4DL Arachis hypogaea HOM05D002981 ORTHO05D003725 7.8e-08 61.2 86 41.9
Cpa.g.sc18.9 Carica papaya HOM05D002981 ORTHO05D003725 7.8e-08 61.2 72 48.6
ClCG09G005250 Citrullus lanatus HOM05D002981 ORTHO05D003725 7.8e-08 61.2 73 47.9
Migut.N02114 Erythranthe guttata HOM05D002981 ORTHO05D003725 7.8e-08 61.2 73 43.8
FvH4_6g07230 Fragaria vesca HOM05D002981 ORTHO05D003725 7.8e-08 61.2 73 47.9
FAN02G4218 Fragaria x ananassa HOM05D002981 ORTHO05D003725 7.8e-08 61.2 73 47.9
FAN05G2722 Fragaria x ananassa HOM05D002981 ORTHO05D003725 7.8e-08 61.2 73 47.9
FAN14G0083 Fragaria x ananassa HOM05D002981 ORTHO05D003725 7.8e-08 61.2 73 47.9
Gohir.D12G129900 Gossypium hirsutum HOM05D002981 ORTHO05D003725 7.8e-08 61.2 77 44.2
Manes.05G002000 Manihot esculenta HOM05D002981 ORTHO05D003725 7.8e-08 61.2 72 47.2
Thecc.01G310600 Theobroma cacao HOM05D002981 ORTHO05D003725 7.8e-08 61.2 86 41.9
TWI75G0141 Tripterygium wilfordii HOM05D002981 ORTHO05D003725 7.8e-08 61.2 73 47.9
BcaB01g03165 Brassica carinata HOM05D002981 ORTHO05D003725 1.0e-07 60.8 72 44.4
BcaC01g05028 Brassica carinata HOM05D002981 ORTHO05D003725 1.0e-07 60.8 72 44.4
A03p25980 Brassica napus HOM05D002981 ORTHO05D003725 1.0e-07 60.8 72 44.4
C03p30980 Brassica napus HOM05D002981 ORTHO05D003725 1.0e-07 60.8 72 44.4
Carub.0004s3019 Capsella rubella HOM05D002981 ORTHO05D003725 1.0e-07 60.8 72 44.4
CiPaw.08G156600 Carya illinoinensis HOM05D002981 ORTHO05D003725 1.0e-07 60.8 73 45.2
FAN09G2340 Fragaria x ananassa HOM05D002981 ORTHO05D003725 1.0e-07 60.8 73 47.9
THA.LOC104802194 Tarenaya hassleriana HOM05D002981 ORTHO05D003725 1.0e-07 60.8 73 46.6
TWI18G0728 Tripterygium wilfordii HOM05D002981 ORTHO05D003725 1.0e-07 60.8 73 46.6
CANSAT54G0071 Cannabis sativa HOM05D002981 ORTHO05D003725 1.3e-07 60.5 73 47.9
Haze_05013 Corylus avellana HOM05D002981 ORTHO05D003725 1.3e-07 60.5 73 46.6
Sed0000157 Sechium edule HOM05D002981 ORTHO05D003725 1.3e-07 60.5 73 47.9
Hund21746 Selenicereus undatus HOM05D002981 ORTHO05D003725 1.3e-07 60.5 73 45.2
AL4G47030 Arabidopsis lyrata HOM05D002981 ORTHO05D003725 1.7e-07 60.1 72 44.4
AT2G47470 Arabidopsis thaliana HOM05D002981 ORTHO05D003725 1.7e-07 60.1 72 44.4
MSTRG.27951 Avicennia marina HOM05D002981 ORTHO05D003725 1.7e-07 60.1 73 45.2
BcaB02g08769 Brassica carinata HOM05D002981 ORTHO05D003725 1.7e-07 60.1 72 44.4
C04p00410 Brassica napus HOM05D002981 ORTHO05D003725 1.7e-07 60.1 72 44.4
BolC4t21686H Brassica oleracea HOM05D002981 ORTHO05D003725 1.7e-07 60.1 72 44.4
BraA03t11815Z Brassica rapa HOM05D002981 ORTHO05D003725 1.7e-07 60.1 87 39.1
CSS0025736 Camellia sinensis var. sinensis HOM05D002981 ORTHO05D003725 1.7e-07 60.1 73 45.2
Lj5g0008352 Lotus japonicus HOM05D002981 ORTHO05D003725 1.7e-07 60.1 73 46.6
TPR.G19768 Trifolium pratense HOM05D002981 ORTHO05D003725 1.7e-07 60.1 86 40.7
vmacro01554 Vaccinium macrocarpon HOM05D002981 ORTHO05D003725 1.7e-07 60.1 73 43.8
Ciclev10020618m.g Citrus clementina HOM05D002981 ORTHO05D003725 2.3e-07 59.7 86 39.5
DCAR_029360 Daucus carota HOM05D002981 ORTHO05D003725 2.3e-07 59.7 73 45.2
Gorai.007G124200 Gossypium raimondii HOM05D002981 ORTHO05D003725 2.3e-07 59.7 86 40.7
Lalb_Chr06g0166671 Lupinus albus HOM05D002981 ORTHO05D003725 2.3e-07 59.7 73 47.9
Os05g0156300 Oryza sativa ssp. japonica HOM05D002981 ORTHO05D003725 2.3e-07 59.7 72 47.2
Sp4g29410 Schrenkiella parvula HOM05D002981 ORTHO05D003725 2.3e-07 59.7 72 44.4
unitig_21.g20026 Utricularia gibba HOM05D002981 ORTHO05D003725 2.3e-07 59.7 72 45.8
unitig_26.g10138 Utricularia gibba HOM05D002981 ORTHO05D003725 2.3e-07 59.7 73 43.8
Aa31LG1G28770 Aethionema arabicum HOM05D002981 ORTHO05D003725 3.0e-07 59.3 85 41.2
EL10Ac4g09830 Beta vulgaris HOM05D002981 ORTHO05D003725 3.0e-07 59.3 40 65.0
Thhalv10001515m.g Eutrema salsugineum HOM05D002981 ORTHO05D003725 3.0e-07 59.3 72 44.4
HanXRQChr10g0299231 Helianthus annuus HOM05D002981 ORTHO05D003725 3.0e-07 59.3 72 48.6
Lj9C217G8 Lonicera japonica HOM05D002981 ORTHO05D003725 3.0e-07 59.3 40 70.0
Medtr1g087520 Medicago truncatula HOM05D002981 ORTHO05D003725 3.0e-07 59.3 86 40.7
PSO761G0326 Papaver somniferum HOM05D002981 ORTHO05D003725 3.0e-07 59.3 73 45.2
SEGI_15151 Sequoiadendron giganteum HOM05D002981 ORTHO05D003725 3.0e-07 59.3 78 42.3
A05p00460 Brassica napus HOM05D002981 ORTHO05D003725 3.9e-07 58.9 72 43.1
BraA05t19044Z Brassica rapa HOM05D002981 ORTHO05D003725 3.9e-07 58.9 72 43.1
PSO210G1046 Papaver somniferum HOM05D002981 ORTHO05D003725 3.9e-07 58.9 73 45.2
Potri.014G122800 Populus trichocarpa HOM05D002981 ORTHO05D003725 3.9e-07 58.9 73 45.2
RcHm_v2.0_Chr3g0456861 Rosa chinensis HOM05D002981 ORTHO05D003725 3.9e-07 58.9 40 72.5
ATR0706G068 Amborella trichopoda HOM05D002981 ORTHO05D003725 5.0e-07 58.5 73 42.5
MELO3C015939.2 Cucumis melo HOM05D002981 ORTHO05D003725 5.0e-07 58.5 83 43.4
Lalb_Chr21g0309481 Lupinus albus HOM05D002981 ORTHO05D003725 5.0e-07 58.5 73 46.6
SalBow3G0105 Salvia bowleyana HOM05D002981 ORTHO05D003725 5.0e-07 58.5 72 47.2
BolC3t15449H Brassica oleracea HOM05D002981 ORTHO05D003725 6.6e-07 58.2 40 62.5
CDE02G3360 Ceratophyllum demersum HOM05D002981 ORTHO05D003725 6.6e-07 58.2 72 45.8
AUR62000684 Chenopodium quinoa HOM05D002981 ORTHO05D003725 6.6e-07 58.2 40 67.5
DCAR_005415 Daucus carota HOM05D002981 ORTHO05D003725 6.6e-07 58.2 72 45.8
Gohir.D11G116000 Gossypium hirsutum HOM05D002981 ORTHO05D003725 6.6e-07 58.2 86 39.5
Sabra14G0091200 Salix brachista HOM05D002981 ORTHO05D003725 6.6e-07 58.2 73 42.5
HPP92_016960 Vanilla planifolia HOM05D002981 ORTHO05D003725 6.6e-07 58.2 73 42.5
Eucgr.K03531 Eucalyptus grandis HOM05D002981 ORTHO05D003725 8.6e-07 57.8 73 45.2
VMungo1383G1934 Vigna mungo HOM05D002981 ORTHO05D026216 8.6e-07 57.8 39 74.4
Zm00001eb179930 Zea mays HOM05D013194 ORTHO05D015061 8.6e-07 57.8 75 41.3
CiPaw.07G115400 Carya illinoinensis HOM05D002981 ORTHO05D003725 1.1e-06 57.4 73 45.2
CDE09G1190 Ceratophyllum demersum HOM05D002981 ORTHO05D003725 1.5e-06 57.0 72 44.4
Duzib138G0226 Durio zibethinus HOM05D002981 ORTHO05D003725 1.5e-06 57.0 86 40.7
Potri.002G198300 Populus trichocarpa HOM05D002981 ORTHO05D003725 1.5e-06 57.0 73 42.5
Zm00001eb282710 Zea mays HOM05D002981 ORTHO05D003725 1.5e-06 57.0 73 43.8
Hund07135 Selenicereus undatus HOM05D002981 ORTHO05D003725 1.9e-06 56.6 81 38.3
ECA234G2827 Erigeron canadensis HOM05D002981 ORTHO05D003725 2.5e-06 56.2 72 44.4
Hma1.2p1_0472F.1_g159880 Hydrangea macrophylla HOM05D002981 ORTHO05D003725 2.5e-06 56.2 86 39.5
AUR62005272 Chenopodium quinoa HOM05D002981 ORTHO05D003725 3.3e-06 55.8 40 65.0
DCAR_025272 Daucus carota HOM05D002981 ORTHO05D003725 3.3e-06 55.8 72 45.8
Hma1.2p1_0008F-1.1_g005760 Hydrangea macrophylla HOM05D002981 ORTHO05D003725 3.3e-06 55.8 73 45.2
Lsat_1_v5_gn_5_102801 Lactuca sativa HOM05D002981 ORTHO05D003725 3.3e-06 55.8 72 44.4
Haze_04080 Corylus avellana HOM05D002981 ORTHO05D003725 4.3e-06 55.5 73 43.8
Pp3c4_19910 Physcomitrium patens HOM05D002981 ORTHO05D003725 4.3e-06 55.5 72 41.7
AagrBONN_evm.TU.Sc2ySwM_228.808 Anthoceros agrestis HOM05D002981 ORTHO05D003725 5.6e-06 55.1 40 62.5
SMO201G0065 Selaginella moellendorffii HOM05D002981 ORTHO05D003725 7.3e-06 54.7 47 53.2
SMO306G0009 Selaginella moellendorffii HOM05D002981 ORTHO05D003725 7.3e-06 54.7 40 60.0


User provided reference genes

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