Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 5.6e-81 304.7 210 100.0
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 1.0e-66 257.3 215 71.2
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 6.2e-64 248.1 157 86.0
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 1.3e-58 230.3 162 79.0
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 6.2e-56 221.5 161 77.0
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 3.8e-53 212.2 149 78.5
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 8.4e-53 211.1 144 79.2
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 7.8e-51 204.5 159 71.1
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 1.0e-50 204.1 166 69.3
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 2.3e-50 203.0 146 74.0
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 3.9e-50 202.2 156 71.2
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 1.1e-49 200.7 137 76.6
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 1.9e-49 199.9 138 76.1
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 2.5e-49 199.5 158 70.3
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 3.3e-49 199.1 140 75.7
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 4.3e-49 198.7 157 70.7
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 7.3e-49 198.0 135 77.0
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 2.1e-48 196.4 155 69.7
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 2.8e-48 196.1 155 71.6
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 3.6e-48 195.7 142 74.6
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 3.6e-48 195.7 147 72.8
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 3.6e-48 195.7 159 68.6
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.1e-47 194.1 163 67.5
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 1.4e-47 193.7 148 70.9
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 1.4e-47 193.7 146 71.9
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 1.8e-47 193.4 139 72.7
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 2.4e-47 193.0 138 74.6
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 4.0e-47 192.2 137 75.9
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 5.3e-47 191.8 137 75.2
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 5.3e-47 191.8 137 75.2
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 6.9e-47 191.4 148 70.3
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 6.9e-47 191.4 161 68.9
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 6.9e-47 191.4 138 74.6
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 9.0e-47 191.0 134 75.4
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 1.2e-46 190.7 155 70.3
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 1.5e-46 190.3 147 72.1
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 5.8e-46 188.3 134 73.9
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 7.6e-46 188.0 138 71.0
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 7.6e-46 188.0 172 61.0
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 7.6e-46 188.0 162 64.8
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 7.6e-46 188.0 131 75.6
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 3.8e-45 185.7 138 72.5
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 4.9e-45 185.3 163 65.0
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 1.1e-44 184.1 133 70.7
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 1.4e-44 183.7 173 61.3
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.4e-44 183.7 155 67.7
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 1.4e-44 183.7 156 64.7
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 1.4e-44 183.7 156 63.5
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 1.9e-44 183.3 164 62.2
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.4e-44 183.0 140 68.6
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 4.2e-44 182.2 161 62.1
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 5.4e-44 181.8 135 73.3
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.2e-43 180.6 154 66.9
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 1.6e-43 180.3 144 68.8
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.5e-43 179.1 144 68.1
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 4.6e-43 178.7 152 67.1
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 4.6e-43 178.7 146 65.1
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 6.0e-43 178.3 164 57.3
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 1.0e-42 177.6 159 64.8
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 1.3e-42 177.2 166 59.6
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 1.8e-42 176.8 143 63.6
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.8e-42 176.8 153 66.0
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 3.0e-42 176.0 169 58.0
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 3.9e-42 175.6 176 56.8
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 5.1e-42 175.3 140 67.9
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 6.7e-42 174.9 146 61.6
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 8.7e-42 174.5 155 63.2
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 1.1e-41 174.1 133 69.9
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 1.9e-41 173.3 138 65.2
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 3.3e-41 172.6 140 66.4
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 4.3e-41 172.2 162 59.9
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 5.6e-41 171.8 153 62.7
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 5.6e-41 171.8 156 63.5
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.8e-40 169.5 141 63.1
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 3.7e-40 169.1 176 55.1
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 4.8e-40 168.7 137 70.1
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 6.2e-40 168.3 130 69.2
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 8.1e-40 167.9 170 55.9
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 8.1e-40 167.9 170 55.9
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 8.1e-40 167.9 170 55.9
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.1e-39 167.5 135 64.4
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 1.8e-39 166.8 170 54.7
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 1.8e-39 166.8 153 60.1
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 2.4e-39 166.4 131 65.6
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 3.1e-39 166.0 137 66.4
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 4.0e-39 165.6 153 64.7
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 5.3e-39 165.2 171 54.4
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 5.3e-39 165.2 146 64.4
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 6.9e-39 164.9 165 57.0
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 6.9e-39 164.9 143 60.1
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 9.0e-39 164.5 131 68.7
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 9.0e-39 164.5 133 66.9
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 1.2e-38 164.1 143 58.7
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 1.5e-38 163.7 131 63.4
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 2.0e-38 163.3 148 59.5
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 2.6e-38 162.9 143 58.0
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 2.6e-38 162.9 143 57.3
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 5.8e-38 161.8 143 58.0
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 5.8e-38 161.8 158 59.5
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 5.8e-38 161.8 153 61.4
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 1.0e-37 161.0 131 64.1
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 1.3e-37 160.6 164 57.3
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 2.5e-36 156.4 126 63.5
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 3.2e-36 156.0 162 55.6
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 9.3e-36 154.5 131 62.6
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 7.9e-35 151.4 142 59.9
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 7.9e-35 151.4 145 60.0
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 4.3e-33 145.6 139 56.8
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 9.6e-33 144.4 168 52.4
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 9.6e-33 144.4 168 52.4
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 2.8e-32 142.9 142 60.6
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 4.8e-32 142.1 168 50.6
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 4.8e-32 142.1 168 52.4
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 4.8e-32 142.1 168 50.6
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 4.8e-32 142.1 168 50.6
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 6.2e-32 141.7 168 52.4
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 1.4e-31 140.6 131 57.3
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 3.1e-31 139.4 168 51.8
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 9.0e-31 137.9 152 52.6
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 9.0e-31 137.9 152 52.6
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-30 137.5 169 50.3
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 5.8e-30 135.2 135 57.8
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.0e-29 134.4 113 63.7
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 1.7e-29 133.7 146 51.4
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 2.1e-27 126.7 151 49.7
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 1.8e-26 123.6 93 73.1
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 1.1e-25 120.9 131 51.1
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.9e-25 120.2 110 60.0
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.6e-24 117.1 167 46.7
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 2.2e-24 116.7 154 48.7
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 4.8e-24 115.5 147 51.0
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 4.8e-24 115.5 147 51.0
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 4.8e-24 115.5 111 58.6
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 8.2e-24 114.8 135 51.9
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 4.1e-23 112.5 155 48.4
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 3.2e-20 102.8 97 60.8
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 7.7e-14 81.6 67 67.2
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 4.4e-09 65.9 133 35.3
AagrBONN_evm.TU.Sc2ySwM_117.2481 Anthoceros agrestis HOM05D005256 ORTHO05D006491 3.5e-06 56.2 98 31.6
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 5.9e-06 55.5 74 43.2


User provided reference genes

Program Settings