Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 3.1e-301 1037.7 548 100.0
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 4.2e-181 638.6 569 64.9
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.0e-179 634.0 568 64.6
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 2.7e-111 406.8 521 50.9
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 6.1e-111 405.6 549 47.0
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 1.6e-108 397.5 551 47.0
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 6.7e-102 375.6 533 47.8
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 1.5e-101 374.4 543 44.8
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.4e-96 357.8 547 44.2
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 2.3e-78 297.4 332 54.5
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 4.0e-70 270.0 380 46.8
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 7.8e-58 229.2 222 57.7
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 8.3e-52 209.1 582 33.5
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 2.3e-46 191.0 644 30.4
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 5.2e-46 189.9 445 37.3
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 6.8e-46 189.5 641 31.5
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 9.2e-43 179.1 604 31.0
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.3e-41 175.3 430 34.7
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 3.9e-41 173.7 636 30.5
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 9.5e-40 169.1 625 30.6
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.2e-39 168.7 367 37.1
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 2.8e-39 167.5 376 35.4
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.7e-39 166.8 605 28.6
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 2.3e-38 164.5 612 29.2
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 8.9e-38 162.5 586 29.7
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 2.6e-37 161.0 494 31.4
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 3.4e-37 160.6 407 32.9
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 7.6e-37 159.5 571 29.8
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.1e-35 155.6 596 30.0
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.9e-35 154.8 426 33.3
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 2.1e-34 151.4 554 28.7
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 7.8e-34 149.4 714 27.7
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.7e-33 148.3 634 28.1
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.7e-33 148.3 463 32.0
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.3e-33 147.9 631 28.5
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 8.6e-33 146.0 631 28.8
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.5e-32 144.4 441 31.3
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 3.3e-32 144.1 567 30.9
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 4.3e-32 143.7 391 32.7
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.1e-30 139.0 623 28.7
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.8e-30 138.3 608 27.6
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.2e-29 135.6 553 28.9
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 2.0e-29 134.8 375 30.1
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 2.2e-28 131.3 662 26.1
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 3.8e-28 130.6 442 30.5
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.8e-28 130.6 343 30.6
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 6.4e-28 129.8 596 27.9
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 1.1e-27 129.0 351 31.3
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.1e-27 129.0 672 26.2
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.4e-27 127.9 406 32.0
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 3.2e-27 127.5 123 52.0
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 5.4e-27 126.7 402 31.1
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 9.3e-27 125.9 219 38.8
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.6e-26 125.2 575 26.6
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.6e-26 125.2 145 49.0
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 1.6e-26 125.2 135 48.1
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.1e-26 124.8 597 28.5
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.1e-26 124.8 122 53.3
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 2.7e-26 124.4 579 25.7
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 3.5e-26 124.0 489 30.1
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 4.6e-26 123.6 622 26.5
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.8e-26 122.9 601 28.3
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.3e-25 121.3 596 29.0
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 5.6e-24 116.7 229 39.3
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 2.1e-23 114.8 554 26.9
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.8e-23 114.4 406 28.3
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.6e-23 114.0 594 28.5
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 8.1e-23 112.8 406 28.1
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 8.1e-23 112.8 119 47.9
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.4e-22 112.1 329 30.1
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.8e-22 111.7 665 26.5
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 3.1e-22 110.9 552 27.2
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 6.9e-22 109.8 135 46.7
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.0e-21 108.2 101 51.5
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 5.8e-21 106.7 557 26.8
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 7.6e-21 106.3 431 29.5
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 2.2e-20 104.8 589 25.1
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 2.9e-20 104.4 642 24.8
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 3.8e-20 104.0 555 27.7
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 3.2e-19 100.9 563 24.9
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 3.2e-19 100.9 408 27.0
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 9.3e-19 99.4 557 26.4
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 9.3e-19 99.4 392 28.1
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 6.0e-18 96.7 495 23.6
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 1.3e-17 95.5 576 24.8
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 5.1e-17 93.6 545 27.5
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 3.3e-16 90.9 132 43.2
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 4.3e-16 90.5 586 26.3
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 5.6e-16 90.1 152 36.8
Lalb_Chr08g0232031 Lupinus albus HOM05D006771 ORTHO05D008296 3.6e-15 87.4 82 61.0
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 4.8e-15 87.0 476 26.1
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 8.1e-15 86.3 278 29.1
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.8e-14 85.1 143 38.5
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.8e-14 85.1 143 38.5
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 4.0e-14 84.0 148 39.2
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 6.9e-14 83.2 465 25.8
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 6.9e-14 83.2 79 46.8
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 4.5e-13 80.5 336 27.4
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 1.7e-12 78.6 133 36.8
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 5.5e-11 73.6 540 24.1
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 2.1e-10 71.6 66 54.5
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 2.7e-10 71.2 92 42.4
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 2.7e-10 71.2 325 27.7
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.5e-10 70.9 325 25.2
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 3.5e-10 70.9 153 30.1
Lalb_Chr08g0232041 Lupinus albus HOM05D006771 ORTHO05D008296 6.0e-10 70.1 157 40.1
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 7.9e-10 69.7 127 33.9
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 1.8e-06 58.5 56 51.8


User provided reference genes

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