Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g141640 Pisum sativum HOM05D000574 ORTHO05D331011 5.3e-34 147.1 75 100.0
Psat1g144800 Pisum sativum HOM05D000574 ORTHO05D004834 6.7e-21 103.6 76 77.6
Medtr2g038200 Medicago truncatula HOM05D000574 ORTHO05D004834 5.7e-20 100.5 75 73.3
VMungo1309G2517 Vigna mungo HOM05D000574 ORTHO05D004834 1.1e-15 86.3 83 60.2
Glyma.15G167000 Glycine max HOM05D000574 ORTHO05D004834 4.2e-15 84.3 84 59.5
Phvul.009G235300 Phaseolus vulgaris HOM05D000574 ORTHO05D004834 4.2e-15 84.3 83 59.0
TPR.G31048 Trifolium pratense HOM05D000574 ORTHO05D004834 2.7e-14 81.6 78 64.1
Ca_02120_v3 Cicer arietinum L. HOM05D000574 ORTHO05D004834 3.6e-14 81.3 71 59.2
Glyma.09G060500 Glycine max HOM05D000574 ORTHO05D004834 6.1e-14 80.5 85 54.1
Glyma.17G058400 Glycine max HOM05D000574 ORTHO05D004834 2.0e-12 75.5 72 61.1
VMungo1215G2189 Vigna mungo HOM05D000574 ORTHO05D004834 2.0e-12 75.5 72 59.7
Lj6g0006401 Lotus japonicus HOM05D000574 ORTHO05D004834 1.3e-11 72.8 81 58.0
Prupe.1G073700 Prunus persica HOM05D000574 ORTHO05D004834 1.3e-11 72.8 76 52.6
Dinv25452 Davidia involucrata HOM05D000574 ORTHO05D004834 1.7e-11 72.4 75 53.3
Duzib150G1101 Durio zibethinus HOM05D000574 ORTHO05D004834 3.7e-11 71.2 68 55.9
Ciclev10007337m.g Citrus clementina HOM05D000574 ORTHO05D004834 4.8e-11 70.9 67 58.2
Duzib168G2367 Durio zibethinus HOM05D000574 ORTHO05D004834 4.8e-11 70.9 68 55.9
MD00G1086800 Malus domestica HOM05D000574 ORTHO05D004834 6.3e-11 70.5 74 52.7
Manes.06G018300 Manihot esculenta HOM05D000574 ORTHO05D004834 6.3e-11 70.5 66 57.6
Potri.006G073800 Populus trichocarpa HOM05D000574 ORTHO05D004834 6.3e-11 70.5 69 53.6
Potri.018G140900 Populus trichocarpa HOM05D000574 ORTHO05D004834 6.3e-11 70.5 69 55.1
FAN17G2351 Fragaria x ananassa HOM05D000574 ORTHO05D004834 8.3e-11 70.1 68 54.4
Glyma.13G101300 Glycine max HOM05D000574 ORTHO05D004834 1.1e-10 69.7 72 55.6
Atru.chr7.939 Acer truncatum HOM05D000574 ORTHO05D004834 1.4e-10 69.3 72 52.8
Rhsim03G0267500 Rhododendron simsii HOM05D000574 ORTHO05D004834 1.4e-10 69.3 70 54.3
RcHm_v2.0_Chr4g0399171 Rosa chinensis HOM05D000574 ORTHO05D004834 1.4e-10 69.3 68 54.4
FvH4_4g07050 Fragaria vesca HOM05D000574 ORTHO05D004834 1.8e-10 68.9 68 54.4
FAN12G1755 Fragaria x ananassa HOM05D000574 ORTHO05D004834 1.8e-10 68.9 68 54.4
MD16G1247100 Malus domestica HOM05D000574 ORTHO05D004834 2.4e-10 68.6 78 48.7
GSVIVG01029304001 Vitis vinifera HOM05D000574 ORTHO05D004834 2.4e-10 68.6 75 53.3
TPR.G5385 Trifolium pratense HOM05D000574 ORTHO05D004834 3.1e-10 68.2 73 50.7
FAN07G2076 Fragaria x ananassa HOM05D000574 ORTHO05D004834 4.1e-10 67.8 68 52.9
FAN22G2359 Fragaria x ananassa HOM05D000574 ORTHO05D004834 4.1e-10 67.8 68 52.9
Lalb_Chr12g0199651 Lupinus albus HOM05D000574 ORTHO05D004834 5.3e-10 67.4 71 54.9
Haze_22040 Corylus avellana HOM05D000574 ORTHO05D004834 7.0e-10 67.0 75 52.0
vmacro05991 Vaccinium macrocarpon HOM05D000574 ORTHO05D004834 9.1e-10 66.6 68 51.5
MELO3C003958.2 Cucumis melo HOM05D000574 ORTHO05D004834 1.6e-09 65.9 76 51.3
PSO063G3889 Papaver somniferum HOM05D000574 ORTHO05D004834 2.0e-09 65.5 68 54.4
CsaV3_2G008820 Cucumis sativus L. HOM05D000574 ORTHO05D004834 2.7e-09 65.1 72 52.8
Dinv41189 Davidia involucrata HOM05D000574 ORTHO05D004834 2.7e-09 65.1 68 57.4
CSS0001018 Camellia sinensis var. sinensis HOM05D000574 ORTHO05D004834 3.5e-09 64.7 69 50.7
CiPaw.07G198200 Carya illinoinensis HOM05D000574 ORTHO05D004834 3.5e-09 64.7 75 49.3
Manes.14G163200 Manihot esculenta HOM05D000574 ORTHO05D004834 5.9e-09 63.9 66 53.0
Medtr4g127290 Medicago truncatula HOM05D000574 ORTHO05D004834 7.7e-09 63.5 69 49.3
PSO170G5277 Papaver somniferum HOM05D000574 ORTHO05D004834 7.7e-09 63.5 68 52.9
CiPaw.08G032000 Carya illinoinensis HOM05D000574 ORTHO05D004834 1.0e-08 63.2 75 50.7
Lalb_Chr07g0180691 Lupinus albus HOM05D000574 ORTHO05D004834 1.0e-08 63.2 71 49.3
QL02p047225 Quercus lobata HOM05D000574 ORTHO05D004834 1.0e-08 63.2 75 50.7
Sabra18G0115100 Salix brachista HOM05D000574 ORTHO05D004834 1.0e-08 63.2 65 53.8
Sabra06G0055000 Salix brachista HOM05D000574 ORTHO05D004834 1.3e-08 62.8 69 49.3
Sed0008059 Sechium edule HOM05D000574 ORTHO05D004834 1.3e-08 62.8 76 50.0
Oeu018826.1 Olea europaea HOM05D000574 ORTHO05D004834 2.9e-08 61.6 68 50.0
CANSAT01G1160 Cannabis sativa HOM05D000574 ORTHO05D004834 3.8e-08 61.2 79 44.3
arahy.Tifrunner.gnm1.ann1.WDF2TS Arachis hypogaea HOM05D000574 ORTHO05D004834 6.5e-08 60.5 76 44.7
TWI34G0712 Tripterygium wilfordii HOM05D000574 ORTHO05D004834 8.5e-08 60.1 71 49.3
arahy.Tifrunner.gnm1.ann1.M4LRUB Arachis hypogaea HOM05D000574 ORTHO05D004834 1.1e-07 59.7 76 44.7
ClCG06G013680 Citrullus lanatus HOM05D000574 ORTHO05D004834 1.5e-07 59.3 77 45.5
Psat4g013520 Pisum sativum HOM05D000574 ORTHO05D004834 1.5e-07 59.3 77 45.5
MELO3C017420.2 Cucumis melo HOM05D000574 ORTHO05D004834 2.5e-07 58.5 75 45.3
CsaV3_1G031950 Cucumis sativus L. HOM05D000574 ORTHO05D004834 2.5e-07 58.5 75 45.3
DCAR_020145 Daucus carota HOM05D000574 ORTHO05D004834 2.5e-07 58.5 65 47.7
Ca_21258_v3 Cicer arietinum L. HOM05D000574 ORTHO05D004834 4.2e-07 57.8 72 48.6
TAR383G0266 Trochodendron aralioides HOM05D000574 ORTHO05D004834 5.5e-07 57.4 78 46.2
TAR626G1471 Trochodendron aralioides HOM05D000574 ORTHO05D004834 7.2e-07 57.0 81 46.9
TAR626G1540 Trochodendron aralioides HOM05D000574 ORTHO05D004834 7.2e-07 57.0 81 46.9
Nn8g40676 Nelumbo nucifera HOM05D000574 ORTHO05D004834 9.4e-07 56.6 78 44.9
arahy.Tifrunner.gnm1.ann1.E7V948 Arachis hypogaea HOM05D000574 ORTHO05D004834 1.2e-06 56.2 59 55.9
arahy.Tifrunner.gnm1.ann1.A8H1KI Arachis hypogaea HOM05D000574 ORTHO05D004834 1.6e-06 55.8 59 55.9
ClCG11G011650 Citrullus lanatus HOM05D000574 ORTHO05D004834 1.6e-06 55.8 76 46.1
Sed0021866 Sechium edule HOM05D000574 ORTHO05D004834 2.1e-06 55.5 79 44.3
Actinidia07551 Actinidia chinensis HOM05D000574 ORTHO05D004834 4.7e-06 54.3 70 47.1
Cc06_g17450 Coffea canephora HOM05D000574 ORTHO05D004834 8.0e-06 53.5 71 43.7


User provided reference genes

Program Settings