Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g136240 Pisum sativum HOM05D008981 ORTHO05D011238 5.1e-126 454.5 244 100.0
Psat1g141520 Pisum sativum HOM05D008981 ORTHO05D011238 1.4e-80 303.5 234 73.9
Psat3g118400 Pisum sativum HOM05D008981 ORTHO05D011238 4.5e-74 282.0 262 63.0
Psat2g165840 Pisum sativum HOM05D008981 ORTHO05D011238 5.3e-59 231.9 263 54.8
Psat7g035080 Pisum sativum HOM05D008981 ORTHO05D011238 7.7e-58 228.0 298 53.0
Psat7g036520 Pisum sativum HOM05D008981 ORTHO05D011238 1.0e-41 174.5 128 78.1
Psat4g121720 Pisum sativum HOM05D008981 ORTHO05D011238 3.3e-40 169.5 128 79.7
Psat0s1788g0120 Pisum sativum HOM05D008981 ORTHO05D011238 2.4e-35 153.3 91 89.0
Psat3g181160 Pisum sativum HOM05D008981 ORTHO05D011238 4.1e-35 152.5 118 78.0
TPR.G40251 Trifolium pratense HOM05D008981 ORTHO05D011238 1.2e-34 151.0 188 55.3
Psat0s1056g0040 Pisum sativum HOM05D008981 ORTHO05D011238 1.4e-30 137.5 104 76.9
Psat3g026400 Pisum sativum HOM05D008981 ORTHO05D011238 9.2e-27 124.8 82 78.0
CSS0049353 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.6e-18 97.4 80 60.0
CSS0044422 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.7e-18 96.7 73 63.0
CSS0017579 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.5e-18 96.3 73 63.0
TPR.G32193 Trifolium pratense HOM05D008981 ORTHO05D000014 4.6e-18 95.9 272 34.6
CSS0006701 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.0e-18 95.5 80 58.8
TPR.G32077 Trifolium pratense HOM05D000023 ORTHO05D000014 7.8e-18 95.1 67 64.2
CSS0045728 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.0e-17 94.7 100 56.0
Psat6g223240 Pisum sativum HOM05D008981 ORTHO05D011238 1.7e-17 94.0 88 70.5
CSS0004804 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.3e-17 93.6 87 56.3
CSS0026734 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.3e-17 93.6 100 56.0
CSS0045108 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.1e-17 92.4 73 61.6
Psat6g113880 Pisum sativum HOM05D008981 ORTHO05D009195 8.6e-17 91.7 73 71.2
Rhsim05G0096600 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.9e-16 90.5 111 44.1
Manes.02G210140 Manihot esculenta HOM05D000023 ORTHO05D000014 1.2e-15 87.8 86 51.2
TPR.G33254 Trifolium pratense HOM05D008981 ORTHO05D009195 1.1e-14 84.7 96 55.2
Gorai.005G223300 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.8e-14 84.0 118 44.1
Gorai.011G148700 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.8e-14 84.0 118 44.1
Manes.18G062550 Manihot esculenta HOM05D012182 ORTHO05D011238 2.3e-14 83.6 59 62.7
Gohir.D08G172950 Gossypium hirsutum HOM05D001165 ORTHO05D001347 1.2e-13 81.3 140 40.7
Manes.14G027972 Manihot esculenta HOM05D012182 ORTHO05D000014 1.2e-13 81.3 87 46.0
Ah.06g187040 Amaranthus hybridus HOM05D012182 ORTHO05D011238 4.4e-13 79.3 69 47.8
Ah.03g144780 Amaranthus hybridus HOM05D000023 ORTHO05D000014 5.8e-13 79.0 193 30.6
Gorai.010G071800 Gossypium raimondii HOM05D000023 ORTHO05D000014 5.8e-13 79.0 207 35.3
Dinv15899 Davidia involucrata HOM05D013973 ORTHO05D011238 1.3e-12 77.8 95 46.3
Gorai.011G164900 Gossypium raimondii HOM05D000023 ORTHO05D009195 1.3e-12 77.8 73 54.8
Psat2g141160 Pisum sativum HOM05D008981 ORTHO05D011238 2.9e-12 76.6 40 90.0
Gorai.001G146900 Gossypium raimondii HOM05D000023 ORTHO05D000014 3.7e-12 76.3 77 50.6
Dinv21131 Davidia involucrata HOM05D013973 ORTHO05D011238 8.3e-12 75.1 90 42.2
Gorai.002G161200 Gossypium raimondii HOM05D000023 ORTHO05D000014 8.3e-12 75.1 211 34.1
Gohir.A06G098402 Gossypium hirsutum HOM05D000023 ORTHO05D000014 1.1e-11 74.7 259 30.9
Rhsim04G0137200 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.1e-11 74.7 98 44.9
Rhsim02G0219500 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.4e-11 74.3 98 44.9
RhsimUnG0127700 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.4e-11 74.3 98 44.9
RhsimUnG0234800 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.4e-11 74.3 98 44.9
Gohir.A01G142850 Gossypium hirsutum HOM05D000023 ORTHO05D000014 2.4e-11 73.6 199 33.7
Gorai.007G113800 Gossypium raimondii HOM05D000023 ORTHO05D000014 3.2e-11 73.2 205 31.7
Gorai.002G112900 Gossypium raimondii HOM05D000023 ORTHO05D000014 5.4e-11 72.4 118 38.1
AUR62017483 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.1e-11 72.0 88 42.0
Manes.06G045801 Manihot esculenta HOM05D012182 ORTHO05D011238 9.2e-11 71.6 56 58.9
Rhsim04G0084200 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.2e-11 71.6 98 44.9
PGR031G2426 Punica granatum HOM05D000023 ORTHO05D000014 2.1e-10 70.5 74 44.6
Duzib063G0003 Durio zibethinus HOM05D053098 ORTHO05D011238 2.7e-10 70.1 75 48.0
Rhsim02G0208900 Rhododendron simsii HOM05D013973 ORTHO05D000001 6.0e-10 68.9 77 46.8
TPR.G40361 Trifolium pratense HOM05D008981 ORTHO05D011238 6.0e-10 68.9 52 71.2
Actinidia31591 Actinidia chinensis HOM05D013973 ORTHO05D011238 7.8e-10 68.6 58 58.6
Dinv01017 Davidia involucrata HOM05D013973 ORTHO05D011238 7.8e-10 68.6 87 40.2
Gorai.007G179100 Gossypium raimondii HOM05D000023 ORTHO05D000014 7.8e-10 68.6 197 32.0
Manes.05G127901 Manihot esculenta HOM05D012182 ORTHO05D011238 7.8e-10 68.6 49 61.2
Manes.18G138854 Manihot esculenta HOM05D012182 ORTHO05D011238 1.0e-09 68.2 49 61.2
AUR62034279 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.7e-09 67.4 58 50.0
Hund20069 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-09 67.4 74 44.6
Hund26432 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.3e-09 67.0 81 40.7
Hund10834 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.0e-09 66.6 81 40.7
Manes.14G163433 Manihot esculenta HOM05D012182 ORTHO05D011238 3.9e-09 66.2 77 44.2
Hund03452 Selenicereus undatus HOM05D000185 ORTHO05D000014 5.1e-09 65.9 78 42.3
Hund00853 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.6e-09 65.5 81 40.7
Hund08340 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.6e-09 65.5 81 40.7
Hund01377 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.6e-09 65.1 89 38.2
Hund04216 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.6e-09 65.1 89 39.3
Hund09827 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.6e-09 65.1 81 39.5
Hund09860 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.6e-09 65.1 89 39.3
Hund22679 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.6e-09 65.1 81 39.5
Manes.07G082254 Manihot esculenta HOM05D012182 ORTHO05D011238 1.5e-08 64.3 49 57.1
Hund17894 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-08 63.5 81 39.5
Hund17666 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.6e-08 62.4 122 32.0
Hund25537 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.6e-08 62.4 72 41.7
Manes.15G153266 Manihot esculenta HOM05D012182 ORTHO05D011238 9.5e-08 61.6 132 33.3
Hund19738 Selenicereus undatus HOM05D000023 ORTHO05D003407 1.6e-07 60.8 108 32.4
Hund15541 Selenicereus undatus HOM05D000023 ORTHO05D009195 6.2e-07 58.9 74 44.6
TAR500G0002 Trochodendron aralioides HOM05D000023 ORTHO05D000014 6.2e-07 58.9 57 50.9
TPR.G10628 Trifolium pratense HOM05D008981 ORTHO05D011238 8.1e-07 58.5 46 69.6
Ah.13g070190 Amaranthus hybridus HOM05D013973 ORTHO05D011238 1.4e-06 57.8 64 42.2
Gorai.009G365600 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.4e-06 57.8 95 44.2
Hund00663 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.4e-06 57.0 81 33.3
Gorai.007G268400 Gossypium raimondii HOM05D000023 ORTHO05D000014 3.1e-06 56.6 210 32.9
Hund18171 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.0e-06 56.2 85 37.6
Manes.04G059132 Manihot esculenta HOM05D012182 ORTHO05D011238 6.8e-06 55.5 79 39.2


User provided reference genes

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