Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 0.0e+00 2017.3 1084 100.0
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 0.0e+00 1902.5 1084 93.7
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 0.0e+00 1883.6 1084 92.5
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 0.0e+00 1812.3 1048 92.3
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 0.0e+00 1796.6 1082 89.6
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1785.0 1084 88.6
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1784.6 1087 89.3
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1772.7 1098 87.3
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1771.9 1082 88.3
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1753.4 1086 86.9
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 0.0e+00 1747.6 1085 86.6
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 0.0e+00 1629.0 1098 79.4
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 0.0e+00 1617.8 1081 80.8
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 0.0e+00 1602.8 1090 80.2
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 0.0e+00 1598.9 1058 80.4
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 0.0e+00 1588.5 1092 78.8
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 0.0e+00 1583.5 1077 78.5
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 0.0e+00 1575.5 1094 76.7
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 0.0e+00 1566.2 1077 77.7
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 0.0e+00 1564.7 1092 78.7
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 0.0e+00 1562.7 1091 78.4
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 0.0e+00 1561.2 1092 78.6
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 0.0e+00 1560.4 1074 77.5
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 0.0e+00 1560.0 1074 79.0
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1557.0 1071 78.1
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 0.0e+00 1554.7 1083 78.8
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 0.0e+00 1549.3 1090 77.8
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1549.3 1092 76.6
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1547.3 1094 77.3
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 0.0e+00 1542.7 1096 75.3
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 0.0e+00 1538.9 1071 77.2
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 0.0e+00 1538.1 1078 78.4
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 0.0e+00 1534.6 1090 75.4
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 0.0e+00 1532.7 1078 75.7
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1529.2 1072 76.8
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 0.0e+00 1528.8 1093 76.8
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1527.7 1134 74.6
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1527.7 1094 74.3
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1521.5 1118 75.4
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1517.3 1092 74.9
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1517.3 1092 74.9
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 0.0e+00 1514.2 1057 76.8
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1513.4 1073 75.8
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 0.0e+00 1512.3 1087 74.6
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1508.4 1114 72.4
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 0.0e+00 1502.6 1094 75.8
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 0.0e+00 1498.8 1085 73.5
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 0.0e+00 1493.8 868 86.1
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 0.0e+00 1490.7 869 85.3
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1489.6 869 85.2
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1489.2 869 85.0
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 0.0e+00 1486.9 1067 76.4
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1486.1 1078 75.0
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 0.0e+00 1485.3 1196 70.2
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 0.0e+00 1483.8 1080 72.4
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1478.0 1118 74.0
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 0.0e+00 1471.4 974 76.6
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 0.0e+00 1469.1 1088 72.9
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 0.0e+00 1455.3 1097 72.7
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 0.0e+00 1450.3 940 77.9
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 0.0e+00 1445.3 1103 70.7
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1442.9 941 76.8
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 0.0e+00 1442.9 940 76.3
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1442.6 1072 74.0
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 0.0e+00 1441.4 1070 71.1
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1440.6 1085 73.3
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1440.2 1089 72.5
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1440.2 1094 71.3
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 0.0e+00 1439.9 1106 70.6
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 0.0e+00 1438.7 1085 73.5
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1438.3 1072 73.6
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1434.1 1084 69.9
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1420.6 941 76.3
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 0.0e+00 1420.6 941 76.3
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1419.4 941 76.2
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 0.0e+00 1417.9 974 75.3
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1412.5 869 82.0
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 0.0e+00 1402.9 1095 69.4
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 0.0e+00 1394.4 1086 69.6
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 0.0e+00 1392.5 1104 69.0
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1388.2 1125 68.5
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 0.0e+00 1373.6 1101 68.8
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1373.2 1095 71.8
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1371.7 1101 67.8
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 0.0e+00 1364.7 1086 68.3
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1363.2 1007 70.9
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1362.1 1090 67.4
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 0.0e+00 1354.7 1134 66.9
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 0.0e+00 1348.2 1060 68.6
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1347.0 1053 70.6
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 0.0e+00 1333.9 1086 66.5
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1317.4 1204 62.3
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1307.0 1247 58.9
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1280.4 925 71.7
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 0.0e+00 1276.2 901 72.5
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1274.6 1038 65.0
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 0.0e+00 1257.7 1093 65.3
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 0.0e+00 1228.8 1062 61.8
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 0.0e+00 1195.6 937 65.3
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 0.0e+00 1189.1 881 66.5
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 0.0e+00 1121.3 1083 56.5
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 0.0e+00 1097.4 690 79.3
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 0.0e+00 1097.0 692 79.0
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 0.0e+00 1087.8 1072 59.7
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 2.5e-278 962.6 634 77.4
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 1.5e-275 953.4 743 63.0
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 6.1e-272 941.4 690 70.3
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 2.8e-269 932.6 546 83.5
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 5.9e-259 898.3 622 74.3
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.6e-195 687.6 570 62.6
TAR383G0300 Trochodendron aralioides HOM05D003881 ORTHO05D004343 1.1e-180 638.3 521 74.3
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 2.8e-160 570.5 445 64.5
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 2.3e-154 550.8 318 84.6
Sopen07g021070 Solanum pennellii HOM05D003881 ORTHO05D004343 1.6e-126 458.4 392 72.4
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 1.2e-123 448.7 368 59.2
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.0e-122 443.7 450 54.9
Peaxi162Scf00127g00018 Petunia axillaris HOM05D003881 ORTHO05D004343 1.1e-116 425.6 394 65.7
Psat4g185720 Pisum sativum HOM05D003881 ORTHO05D004343 3.4e-105 387.5 248 84.3
QL01p053501 Quercus lobata HOM05D003881 ORTHO05D004343 1.5e-92 345.5 233 75.1
SHI23794 Sapria himalayana HOM05D003881 ORTHO05D004343 1.2e-91 342.4 322 57.5
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 1.8e-90 338.6 276 64.9
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 5.8e-89 333.6 230 73.0
MCO14G023 Micromonas commoda HOM05D003881 ORTHO05D004343 6.4e-88 330.1 1037 27.1
Cre03.g189605 Chlamydomonas reinhardtii HOM05D003881 ORTHO05D004343 2.2e-80 305.1 1034 26.4
Zm00001eb329800 Zea mays HOM05D003881 ORTHO05D004343 5.8e-65 253.8 190 65.8
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 2.4e-63 248.4 134 85.8
ATR0684G009 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.8e-59 235.0 388 38.9
SEGI_33062 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.1e-54 218.8 145 70.3
Thhalv10002929m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 3.3e-44 184.9 217 48.4
MD15G1215900 Malus domestica HOM05D003881 ORTHO05D004343 4.3e-44 184.5 243 50.2
CSS0024068 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 7.4e-44 183.7 99 87.9
ATR0193G014 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.6e-41 175.3 107 79.4
Psat1g224080 Pisum sativum HOM05D003881 ORTHO05D004343 2.6e-41 175.3 89 97.8
HPP92_012481 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.9e-39 169.1 149 59.1
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 9.4e-39 166.8 108 73.1
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 9.4e-39 166.8 483 29.4
CBR_g74627 Chara braunii HOM05D003881 ORTHO05D004343 1.6e-38 166.0 224 42.4
Lsat_1_v5_gn_3_15640 Lactuca sativa HOM05D003881 ORTHO05D004343 3.6e-38 164.9 100 74.0
Psat0s7528g0040 Pisum sativum HOM05D003881 ORTHO05D004343 7.9e-38 163.7 150 64.0
Psat1g059560 Pisum sativum HOM05D003881 ORTHO05D004343 5.1e-37 161.0 150 63.3
SEGI_35060 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 6.9e-34 150.6 188 44.7
SEGI_29160 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.0e-33 149.1 119 58.8
Psat1g034120 Pisum sativum HOM05D003881 ORTHO05D004343 5.9e-33 147.5 86 89.5
Actinidia38472 Actinidia chinensis HOM05D003881 ORTHO05D004343 2.2e-32 145.6 236 39.8
ATR0684G059 Amborella trichopoda HOM05D003881 ORTHO05D004343 7.4e-28 130.6 93 69.9
Hma1.2p1_0528F.1_g173040 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 9.1e-26 123.6 108 62.0
Hma1.2p1_0980F.1_g243635 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 9.1e-26 123.6 108 62.0
Hma1.2p1_1385F.1_g279633 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 9.1e-26 123.6 108 62.0
Psat6g098400 Pisum sativum HOM05D003881 ORTHO05D004343 6.5e-24 117.5 62 91.9
HPP92_006853 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.6e-22 112.8 81 74.1
Hma1.2p1_0508F.1_g168780 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 1.4e-21 109.8 79 68.4
Hma1.2p1_0430F.1_g151320 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 4.4e-20 104.8 61 82.0
Rhsim03G0229000 Rhododendron simsii HOM05D003881 ORTHO05D004343 1.3e-19 103.2 97 63.9
vmacro22673 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 2.2e-19 102.4 289 38.4
HPP92_006870 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.4e-18 99.8 72 72.2
SEGI_23032 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.1e-18 98.2 67 68.7
HPP92_028483 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.6e-17 96.3 61 68.9
SEGI_11752 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.7e-16 92.8 134 42.5
SEGI_26438 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.7e-16 92.8 59 72.9
SEGI_15507 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.9e-16 92.0 79 58.2
SEGI_39855 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.9e-16 92.0 80 61.2
TPR.G10985 Trifolium pratense HOM05D003881 ORTHO05D004343 2.9e-16 92.0 47 95.7
RcHm_v2.0_Chr5g0007121 Rosa chinensis HOM05D003881 ORTHO05D004343 2.5e-15 89.0 51 80.4
ATR0193G048 Amborella trichopoda HOM05D003881 ORTHO05D004343 3.0e-13 82.0 106 45.3
BolC7t41346H Brassica oleracea HOM05D003881 ORTHO05D004343 6.3e-11 74.3 79 51.9
C07p09280 Brassica napus HOM05D003881 ORTHO05D004343 1.6e-09 69.7 79 49.4
PGSC0003DMG400019565 Solanum tuberosum HOM05D003881 ORTHO05D004343 3.5e-09 68.6 81 56.8
HPP92_012555 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.3e-08 66.6 184 37.5
A07p06220 Brassica napus HOM05D003881 ORTHO05D004343 2.5e-07 62.4 72 45.8
CBR_g74625 Chara braunii HOM05D003881 ORTHO05D004343 4.2e-07 61.6 66 47.0
Glyma.18G270500 Glycine max HOM05D000415 ORTHO05D011841 4.2e-07 61.6 58 55.2


User provided reference genes

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