Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 1.4e-288 996.1 706 100.0
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 1.5e-202 710.3 565 72.7
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 2.4e-200 703.0 708 64.4
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 6.2e-185 651.7 489 80.2
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 2.4e-152 543.5 592 64.2
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 2.5e-149 533.5 583 64.8
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 2.3e-147 526.9 733 53.8
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 5.2e-147 525.8 735 56.1
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 1.2e-143 514.6 591 64.1
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 5.9e-143 512.3 316 82.0
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 5.9e-143 512.3 316 82.0
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 2.7e-140 503.4 317 81.1
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 1.4e-139 501.1 598 57.7
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 8.3e-137 491.9 312 80.4
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 1.8e-136 490.7 315 80.0
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 2.3e-134 483.8 318 77.7
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 2.3e-134 483.8 321 76.9
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 3.8e-134 483.0 337 75.7
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 5.0e-134 482.6 322 77.3
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 8.6e-134 481.9 319 76.5
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 8.6e-134 481.9 319 78.1
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 1.5e-133 481.1 312 79.2
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 2.5e-133 480.3 312 78.8
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 7.2e-133 478.8 320 77.2
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 7.2e-133 478.8 313 78.9
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 9.5e-133 478.4 322 76.4
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 9.5e-133 478.4 312 78.2
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 9.5e-133 478.4 316 76.3
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.2e-132 478.0 318 76.1
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 3.6e-132 476.5 316 75.3
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 3.6e-132 476.5 315 77.5
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 4.7e-132 476.1 319 76.5
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 6.1e-132 475.7 316 76.6
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 1.0e-131 474.9 320 76.6
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 2.3e-131 473.8 311 78.1
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 2.3e-131 473.8 311 77.8
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 5.2e-131 472.6 320 74.7
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 2.6e-130 470.3 310 77.1
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 4.4e-130 469.5 312 76.6
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.7e-129 467.6 321 75.7
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.7e-129 467.6 321 75.7
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 2.2e-129 467.2 315 75.9
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 2.9e-129 466.8 322 75.8
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 2.9e-129 466.8 311 76.8
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 3.7e-129 466.5 321 75.4
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 6.4e-129 465.7 314 75.8
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.8e-128 464.2 311 77.5
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 2.4e-128 463.8 309 76.1
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 7.0e-128 462.2 315 78.1
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 9.2e-128 461.8 311 74.0
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 5.9e-127 459.1 309 76.7
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 7.8e-127 458.8 330 74.2
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 1.3e-126 458.0 341 71.6
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.7e-126 457.6 310 75.5
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 2.3e-126 457.2 311 74.0
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 5.0e-126 456.1 310 75.5
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 5.0e-126 456.1 313 76.4
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 5.0e-126 456.1 352 70.2
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 1.9e-125 454.1 308 76.6
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 2.5e-125 453.8 319 74.0
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 5.6e-125 452.6 310 73.9
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 9.5e-125 451.8 311 74.0
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 2.8e-124 450.3 318 73.0
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 3.1e-123 446.8 311 73.3
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 3.1e-123 446.8 320 71.6
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 4.0e-123 446.4 325 70.8
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 5.2e-123 446.0 321 71.7
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 5.2e-123 446.0 315 73.3
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 6.8e-123 445.7 351 68.1
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 3.4e-122 443.4 304 74.7
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 5.8e-122 442.6 326 70.9
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 9.8e-122 441.8 325 70.2
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 1.3e-121 441.4 321 71.3
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 1.7e-121 441.0 322 71.1
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 1.7e-121 441.0 322 71.1
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 2.2e-121 440.7 322 71.1
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 3.2e-120 436.8 321 70.7
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 5.4e-120 436.0 320 71.2
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 2.7e-119 433.7 334 70.7
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 8.6e-118 428.7 316 71.2
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 3.6e-116 423.3 292 74.0
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 1.1e-115 421.8 314 69.4
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 1.4e-115 421.4 385 61.8
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 6.8e-115 419.1 314 69.1
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 4.9e-113 412.9 323 68.1
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 4.9e-113 412.9 317 69.1
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 1.8e-107 394.4 552 45.8
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 3.5e-103 380.2 253 77.1
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 5.1e-102 376.3 299 65.6
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 9.6e-101 372.1 274 67.9
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 2.8e-100 370.5 267 71.5
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 3.1e-99 367.1 309 62.1
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 1.3e-97 361.7 277 70.8
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 1.1e-88 332.0 221 77.4
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 5.1e-86 323.2 293 59.0
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 3.4e-82 310.5 223 72.2
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 1.6e-79 301.6 220 71.4
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 2.3e-70 271.2 185 75.7
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 1.7e-65 255.0 308 51.6
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 1.1e-61 242.3 184 71.2
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 5.7e-53 213.4 147 72.8
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 1.7e-52 211.8 143 72.7
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 2.4e-51 208.0 175 63.4
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 4.1e-43 180.6 277 37.9
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 1.4e-38 165.6 193 53.9
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 1.8e-27 128.6 76 80.3
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 4.1e-27 127.5 93 69.9
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 9.1e-27 126.3 75 81.3
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 4.5e-26 124.0 71 83.1
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 8.5e-25 119.8 89 68.5
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 5.2e-22 110.5 115 58.3
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.1e-19 102.8 65 78.5
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 5.4e-19 100.5 65 76.9
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 1.3e-17 95.9 62 75.8
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 1.3e-17 95.9 67 79.1
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.9e-17 94.7 65 75.4
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 9.5e-16 89.7 50 84.0
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 1.2e-13 82.8 40 95.0
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 5.7e-13 80.5 132 37.1
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 3.2e-11 74.7 50 74.0
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 3.2e-11 74.7 50 74.0
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 9.2e-11 73.2 47 74.5


User provided reference genes

Program Settings