Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 3.3e-56 221.5 111 100.0
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 6.4e-52 207.2 111 91.9
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 1.0e-49 199.9 111 87.4
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 2.3e-49 198.7 111 86.5
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 5.2e-46 187.6 109 83.5
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 1.2e-45 186.4 109 83.5
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 3.5e-42 174.9 109 77.1
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 8.7e-41 170.2 111 77.5
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 2.5e-40 168.7 106 78.3
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 1.8e-38 162.5 106 71.7
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 1.8e-38 162.5 109 72.5
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 3.1e-38 161.8 108 74.1
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 4.0e-38 161.4 109 73.4
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 4.0e-38 161.4 109 69.7
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 9.0e-38 160.2 111 69.4
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 1.5e-37 159.5 109 69.7
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 1.5e-37 159.5 109 73.4
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 2.0e-37 159.1 109 68.8
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.6e-37 158.7 109 71.6
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 3.4e-37 158.3 111 69.4
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 4.5e-37 157.9 111 71.2
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 7.6e-37 157.1 109 67.9
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 9.9e-37 156.8 106 68.9
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 1.3e-36 156.4 109 70.6
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 1.3e-36 156.4 111 68.5
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 1.7e-36 156.0 109 67.0
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 2.2e-36 155.6 109 68.8
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 2.9e-36 155.2 109 68.8
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 3.8e-36 154.8 109 68.8
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 3.8e-36 154.8 111 68.5
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 6.4e-36 154.1 109 67.0
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 6.4e-36 154.1 109 67.0
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 1.1e-35 153.3 109 67.9
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 1.4e-35 152.9 106 71.7
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.9e-35 152.5 109 68.8
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 1.9e-35 152.5 109 72.5
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.4e-35 152.1 106 70.8
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 3.2e-35 151.8 111 65.8
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 3.2e-35 151.8 109 69.7
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 3.2e-35 151.8 111 66.7
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 4.2e-35 151.4 107 66.4
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 4.2e-35 151.4 106 70.8
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 9.3e-35 150.2 105 71.4
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 9.3e-35 150.2 105 71.4
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 9.3e-35 150.2 109 67.9
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 1.2e-34 149.8 111 64.9
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 2.1e-34 149.1 98 72.4
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 2.1e-34 149.1 101 71.3
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 2.7e-34 148.7 111 67.6
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 2.7e-34 148.7 107 65.4
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 2.7e-34 148.7 107 68.2
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 3.5e-34 148.3 108 65.7
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 3.5e-34 148.3 109 65.1
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 3.5e-34 148.3 107 65.4
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 6.0e-34 147.5 107 67.3
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 1.0e-33 146.7 101 69.3
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 1.3e-33 146.4 99 72.7
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 1.3e-33 146.4 106 67.0
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 1.3e-33 146.4 106 67.0
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 3.9e-33 144.8 109 65.1
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 5.1e-33 144.4 111 62.2
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 6.7e-33 144.1 109 60.6
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 1.1e-32 143.3 109 62.4
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 1.5e-32 142.9 109 63.3
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 1.9e-32 142.5 111 63.1
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 3.3e-32 141.7 98 70.4
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 7.4e-32 140.6 103 65.0
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 1.3e-31 139.8 103 65.0
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 1.6e-31 139.4 104 65.4
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 6.2e-31 137.5 98 65.3
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 8.1e-31 137.1 100 66.0
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 8.1e-31 137.1 103 64.1
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 1.1e-30 136.7 108 62.0
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 1.1e-30 136.7 101 63.4
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 3.1e-30 135.2 124 57.3
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 4.0e-30 134.8 105 61.9
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 6.9e-30 134.0 107 61.7
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 6.9e-30 134.0 109 56.0
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 9.0e-30 133.7 132 53.0
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 9.0e-30 133.7 104 63.5
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 1.2e-29 133.3 109 62.4
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 1.5e-29 132.9 104 62.5
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 1.5e-29 132.9 105 61.9
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 2.0e-29 132.5 104 62.5
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 2.0e-29 132.5 105 61.9
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 2.6e-29 132.1 104 62.5
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 2.6e-29 132.1 106 60.4
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 3.4e-29 131.7 109 60.6
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 5.8e-29 131.0 108 62.0
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 5.8e-29 131.0 99 66.7
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 9.9e-29 130.2 101 64.4
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 9.9e-29 130.2 111 61.3
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 1.7e-28 129.4 109 61.5
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 1.7e-28 129.4 101 63.4
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 2.2e-28 129.0 101 64.4
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 2.2e-28 129.0 101 64.4
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 2.9e-28 128.6 101 63.4
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 8.4e-28 127.1 111 59.5
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 8.4e-28 127.1 101 63.4
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.1e-27 126.7 108 60.2
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 1.4e-27 126.3 101 62.4
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 1.4e-27 126.3 99 61.6
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 3.2e-27 125.2 101 61.4
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 4.2e-27 124.8 109 60.6
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 7.1e-27 124.0 101 60.4
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 9.3e-27 123.6 98 61.2
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 3.5e-26 121.7 101 59.4
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 3.5e-26 121.7 101 59.4
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 3.5e-26 121.7 101 59.4
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 3.5e-26 121.7 100 61.0
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 3.5e-26 121.7 100 61.0
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 7.9e-26 120.6 101 58.4
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.0e-25 120.2 100 60.0
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.0e-25 120.2 100 60.0
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 1.0e-25 120.2 101 57.4
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 5.1e-25 117.9 100 57.0
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 2.5e-24 115.5 102 56.9
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 2.5e-24 115.5 101 61.4
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 2.4e-22 109.0 101 52.5
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 6.9e-22 107.5 74 70.3
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 6.9e-22 107.5 101 52.5
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 2.6e-21 105.5 74 73.0
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 1.9e-19 99.4 99 52.5
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 4.2e-19 98.2 98 45.9
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 7.1e-19 97.4 85 56.5
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 2.1e-18 95.9 73 67.1
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 4.6e-18 94.7 95 46.3
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 1.0e-17 93.6 86 55.8
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 2.0e-13 79.3 99 41.4
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 7.6e-13 77.4 70 47.1
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 7.2e-11 70.9 73 50.7
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 4.6e-10 68.2 67 52.2
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 6.1e-10 67.8 109 41.3
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 3.0e-09 65.5 65 47.7
ClCG08G001190 Citrullus lanatus HOM05D005755 ORTHO05D007006 7.4e-08 60.8 60 50.0
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 4.8e-07 58.2 96 36.5
SEGI_15077 Sequoiadendron giganteum HOM05D002017 ORTHO05D007006 1.8e-06 56.2 65 38.5


User provided reference genes

Program Settings