Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g104920 Pisum sativum HOM05D000533 ORTHO05D002807 1.7e-63 245.7 119 100.0
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 7.1e-41 170.6 80 100.0
LjContig00318g0007609 Lotus japonicus HOM05D000533 ORTHO05D002807 2.1e-40 169.1 80 97.5
LjContig00319g0005103 Lotus japonicus HOM05D000533 ORTHO05D002807 2.1e-40 169.1 80 97.5
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 2.1e-40 169.1 80 98.8
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 2.1e-40 169.1 80 98.8
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 2.1e-40 169.1 80 98.8
ATCG01100 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
C09p40310 Brassica napus HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
BolC9t56913H Brassica oleracea HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
BolSC29t60509H Brassica oleracea HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
BolSC35t60689H Brassica oleracea HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
BolSC35t60707H Brassica oleracea HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
BolSC44t60825H Brassica oleracea HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
BolSC47t61062H Brassica oleracea HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
BolSC49t61146H Brassica oleracea HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
BraSC103t45432Z Brassica rapa HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
BraSC143t45657Z Brassica rapa HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
CARHR282470 Cardamine hirsuta HOM05D000533 ORTHO05D002807 2.3e-39 165.6 80 93.8
SalBow1G0006 Salvia bowleyana HOM05D000533 ORTHO05D002807 5.1e-39 164.5 80 93.8
DCAR_032541 Daucus carota HOM05D000533 ORTHO05D002807 6.7e-39 164.1 80 95.0
PGR111G0022 Punica granatum HOM05D000533 ORTHO05D002807 6.7e-39 164.1 80 95.0
TPR.G31189 Trifolium pratense HOM05D000533 ORTHO05D002807 6.7e-39 164.1 86 90.7
Lju5009P0T26 Lonicera japonica HOM05D000533 ORTHO05D002807 8.7e-39 163.7 80 93.8
AL9U11959 Arabidopsis lyrata HOM05D000533 ORTHO05D002807 1.1e-38 163.3 80 92.5
BolSC29t60549H Brassica oleracea HOM05D000533 ORTHO05D002807 1.5e-38 162.9 79 92.4
Medtr4g050810 Medicago truncatula HOM05D000533 ORTHO05D006151 2.5e-38 162.2 76 98.7
Migut.D01249 Erythranthe guttata HOM05D000533 ORTHO05D002807 4.3e-38 161.4 80 92.5
PSO548G0012 Papaver somniferum HOM05D000533 ORTHO05D002807 5.6e-38 161.0 80 92.5
Solyc00g500041.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.1e-37 159.1 76 94.7
CsaV3_1G022940 Cucumis sativus L. HOM05D000533 ORTHO05D002807 3.7e-37 158.3 78 91.0
CAN.G1045.10 Capsicum annuum HOM05D000533 ORTHO05D002807 6.2e-37 157.5 75 94.7
CAN.G1298.18 Capsicum annuum HOM05D000533 ORTHO05D002807 6.2e-37 157.5 75 94.7
CAN.G1526.1 Capsicum annuum HOM05D000533 ORTHO05D002807 6.2e-37 157.5 75 94.7
Gohir.D05G308833 Gossypium hirsutum HOM05D000533 ORTHO05D002807 6.2e-37 157.5 75 94.7
Peaxi162Scf00030g02119 Petunia axillaris HOM05D000533 ORTHO05D006151 6.2e-37 157.5 75 94.7
Peaxi162Scf00269g01411 Petunia axillaris HOM05D000533 ORTHO05D006151 6.2e-37 157.5 75 94.7
EL10Ac1g02291 Beta vulgaris HOM05D000533 ORTHO05D002807 8.1e-37 157.1 75 94.7
EL10As15g24098 Beta vulgaris HOM05D000533 ORTHO05D002807 8.1e-37 157.1 75 94.7
HanXRQChr00c0289g0573151 Helianthus annuus HOM05D000533 ORTHO05D002807 8.1e-37 157.1 75 94.7
HanXRQChr00c0336g0573691 Helianthus annuus HOM05D000533 ORTHO05D002807 8.1e-37 157.1 75 94.7
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 8.1e-37 157.1 75 94.7
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 8.1e-37 157.1 75 94.7
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 8.1e-37 157.1 75 94.7
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 8.1e-37 157.1 75 94.7
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 8.1e-37 157.1 75 94.7
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 8.1e-37 157.1 75 94.7
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 8.1e-37 157.1 75 94.7
Sed0004290 Sechium edule HOM05D000533 ORTHO05D002807 8.1e-37 157.1 80 87.5
Solyc00g500086.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.4e-36 156.4 77 90.9
Solyc00g500123.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.4e-36 156.4 77 90.9
Solyc00g500193.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.4e-36 156.4 77 90.9
arahy.Tifrunner.gnm1.ann1.RBM67I Arachis hypogaea HOM05D000533 ORTHO05D002807 1.8e-36 156.0 77 93.5
Solyc11g021230.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.1e-36 155.2 80 87.5
arahy.Tifrunner.gnm1.ann1.U57TMC Arachis hypogaea HOM05D000533 ORTHO05D002807 5.3e-36 154.5 77 92.2
Gorai.009G395200 Gossypium raimondii HOM05D000533 ORTHO05D002807 5.3e-36 154.5 93 77.4
BraSC138t45532Z Brassica rapa HOM05D000533 ORTHO05D002807 4.5e-35 151.4 74 90.5
FAN01G0230 Fragaria x ananassa HOM05D000533 ORTHO05D002807 7.6e-35 150.6 75 90.7
Lsat_1_v5_gn_8_62921 Lactuca sativa HOM05D000533 ORTHO05D002807 1.7e-34 149.4 80 87.5
Sed0023589 Sechium edule HOM05D000533 ORTHO05D002807 2.9e-34 148.7 74 85.1
Sed0023659 Sechium edule HOM05D000533 ORTHO05D002807 2.9e-34 148.7 74 85.1
Gohir.A10G063750 Gossypium hirsutum HOM05D000533 ORTHO05D002807 1.1e-33 146.7 69 95.7
arahy.Tifrunner.gnm1.ann1.CXW88U Arachis hypogaea HOM05D000533 ORTHO05D002807 2.5e-33 145.6 73 91.8
BraSC58t46464Z Brassica rapa HOM05D000533 ORTHO05D002807 3.2e-33 145.2 74 90.5
Solyc11g050760.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.2e-33 145.2 77 87.0
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 5.5e-33 144.4 77 87.0
Nn1g00560 Nelumbo nucifera HOM05D000533 ORTHO05D002807 3.9e-31 138.3 66 92.4
Lsat_1_v5_gn_4_118121 Lactuca sativa HOM05D000533 ORTHO05D002807 2.4e-28 129.0 65 87.7
Nn1g07318 Nelumbo nucifera HOM05D000533 ORTHO05D002807 5.8e-27 124.4 59 94.9
MELO3C000179.2 Cucumis melo HOM05D000533 ORTHO05D002807 7.6e-27 124.0 59 93.2
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 2.9e-26 122.1 67 83.6
EL10As15g24139 Beta vulgaris HOM05D000533 ORTHO05D002807 2.3e-23 112.5 86 62.8
Solyc02g080275.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 8.7e-23 110.5 54 94.4
HanXRQChr01g0000271 Helianthus annuus HOM05D000533 ORTHO05D001069 1.1e-22 110.2 56 87.5
SMO086G0018 Selaginella moellendorffii HOM05D000533 ORTHO05D002807 3.3e-22 108.6 68 72.1
Sed0007463 Sechium edule HOM05D000533 ORTHO05D002807 6.3e-21 104.4 52 80.8
Glyma.18G155550 Glycine max HOM05D000533 ORTHO05D002807 1.1e-20 103.6 52 94.2
CARHR060450 Cardamine hirsuta HOM05D000533 ORTHO05D002807 6.5e-18 94.4 50 82.0
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 2.7e-16 89.0 47 83.0
Migut.D01386 Erythranthe guttata HOM05D000533 ORTHO05D002807 3.6e-16 88.6 42 90.5
Gohir.1Z049702 Gossypium hirsutum HOM05D000533 ORTHO05D002807 6.1e-16 87.8 42 95.2
arahy.Tifrunner.gnm1.ann1.KIF45B Arachis hypogaea HOM05D000533 ORTHO05D002807 7.9e-16 87.4 47 78.7
Gohir.D11G334101 Gossypium hirsutum HOM05D000533 ORTHO05D002807 2.3e-15 85.9 41 95.1
Eucgr.B03250 Eucalyptus grandis HOM05D000533 ORTHO05D002807 3.0e-15 85.5 40 97.5
Nitab4.5_0017884g0010 Nicotiana tabacum HOM05D000533 ORTHO05D002807 3.9e-15 85.1 45 82.2
HanXRQChr00c0703g0576931 Helianthus annuus HOM05D000533 ORTHO05D002807 1.5e-14 83.2 54 72.2
COL.COLO4_02137 Corchorus olitorius HOM05D000533 ORTHO05D002807 2.5e-14 82.4 88 42.0
Psat0s1160g0360 Pisum sativum HOM05D000533 ORTHO05D006151 2.5e-14 82.4 51 78.4
Psat0s6989g0200 Pisum sativum HOM05D000533 ORTHO05D006151 2.5e-14 82.4 51 78.4
Psat3g095000 Pisum sativum HOM05D000533 ORTHO05D006151 2.5e-14 82.4 51 78.4
Psat6g140600 Pisum sativum HOM05D000533 ORTHO05D006151 2.5e-14 82.4 51 78.4
Solyc02g011790.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 6.3e-13 77.8 68 57.4
HanXRQChr00c0504g0575311 Helianthus annuus HOM05D000533 ORTHO05D006151 1.1e-12 77.0 39 92.3
Medtr4g451555 Medicago truncatula HOM05D000533 ORTHO05D002807 2.4e-12 75.9 40 90.0
Nitab4.5_0001313g0090 Nicotiana tabacum HOM05D000533 ORTHO05D002807 2.4e-12 75.9 48 70.8
BolSC37t60796H Brassica oleracea HOM05D000533 ORTHO05D002807 1.5e-11 73.2 33 90.9
EL10Ac6g14288 Beta vulgaris HOM05D000533 ORTHO05D002807 2.0e-11 72.8 37 78.4
BolC2t10599H Brassica oleracea HOM05D000533 ORTHO05D002807 5.9e-11 71.2 34 94.1
Gohir.D04G093016 Gossypium hirsutum HOM05D000533 ORTHO05D002807 6.5e-10 67.8 79 51.9
arahy.Tifrunner.gnm1.ann1.F0S3GF Arachis hypogaea HOM05D000533 ORTHO05D002807 1.0e-07 60.5 29 96.6
Lalb_Chr07g0191801 Lupinus albus HOM05D000533 ORTHO05D002807 2.3e-07 59.3 29 93.1
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 3.9e-07 58.5 36 72.2
THA.LOC104820711 Tarenaya hassleriana HOM05D000533 ORTHO05D002807 5.1e-07 58.2 60 45.0
Duzib093G2216 Durio zibethinus HOM05D000533 ORTHO05D002807 8.8e-07 57.4 51 62.7
EL10Ac6g13955 Beta vulgaris HOM05D000533 ORTHO05D002807 1.1e-06 57.0 26 96.2
Haze_27295 Corylus avellana HOM05D000533 ORTHO05D002807 2.0e-06 56.2 49 49.0
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 2.0e-06 56.2 50 52.0


User provided reference genes

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