Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 6.3e-210 733.8 353 100.0
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.1e-185 653.3 353 88.1
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.5e-179 632.9 353 85.6
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 6.5e-167 590.9 352 77.0
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.7e-162 576.2 352 76.4
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 2.8e-162 575.5 351 75.8
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 8.3e-162 573.9 353 75.4
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 3.1e-161 572.0 353 75.1
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 3.6e-157 558.5 352 73.6
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 3.6e-157 558.5 352 73.0
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 4.7e-157 558.1 353 73.4
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 1.2e-155 553.5 360 71.9
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 2.6e-155 552.4 351 73.5
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 1.0e-151 540.4 351 72.4
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 2.3e-151 539.3 351 71.2
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 3.3e-150 535.4 351 71.8
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.6e-149 533.1 350 68.9
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 1.0e-148 530.4 351 69.2
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 1.4e-148 530.0 353 69.1
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 2.3e-148 529.3 351 69.2
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 4.0e-148 528.5 351 69.2
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 6.8e-148 527.7 351 70.1
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 8.9e-148 527.3 351 68.9
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.5e-147 526.6 352 68.2
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.5e-147 526.6 351 69.8
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 3.4e-147 525.4 330 73.9
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 9.8e-147 523.9 355 69.0
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 1.7e-146 523.1 351 69.2
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 2.9e-146 522.3 349 69.1
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 3.7e-146 521.9 450 58.0
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 5.4e-145 518.1 350 68.9
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 9.2e-145 517.3 351 69.8
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 3.5e-144 515.4 385 62.9
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 3.5e-144 515.4 350 67.7
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 6.0e-144 514.6 353 67.7
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 1.3e-143 513.5 351 66.1
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 2.3e-143 512.7 350 66.3
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 2.3e-143 512.7 351 67.2
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 4.3e-142 508.4 350 66.0
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 7.3e-142 507.7 350 66.0
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 7.3e-142 507.7 351 67.5
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 1.2e-141 506.9 353 64.3
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.1e-141 506.1 350 66.0
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 4.7e-141 505.0 415 58.8
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 6.2e-141 504.6 351 67.0
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.4e-140 503.4 415 58.8
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 1.4e-140 503.4 352 64.5
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.9e-137 493.0 352 65.3
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 3.0e-135 485.7 354 62.7
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 1.9e-134 483.0 364 64.6
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 6.8e-132 474.6 352 62.2
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 1.3e-130 470.3 352 61.6
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.4e-129 466.1 352 62.5
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 5.4e-129 464.9 352 60.5
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 2.7e-128 462.6 498 50.8
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 1.2e-125 453.8 350 63.4
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 8.1e-125 451.1 319 64.6
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.4e-121 440.3 356 58.4
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 2.1e-120 436.4 352 60.2
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.1e-120 436.4 352 60.2
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 6.0e-120 434.9 456 50.9
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 6.0e-120 434.9 352 59.9
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 2.5e-118 429.5 355 59.4
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 2.5e-102 376.3 197 87.8
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 5.6e-102 375.2 286 61.2
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 2.1e-96 356.7 192 82.3
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 1.5e-91 340.5 215 75.8
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 2.0e-91 340.1 291 58.4
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 4.6e-88 328.9 357 44.5
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.8e-84 317.0 358 45.3
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 5.9e-83 312.0 228 62.3
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 2.3e-79 300.1 343 49.6
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 3.5e-67 259.6 167 69.5
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 1.9e-65 253.8 149 75.2
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.8e-60 237.3 233 47.6
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 7.0e-60 235.3 249 49.4
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 5.2e-55 219.2 358 35.8
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 4.5e-51 206.1 140 64.3
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 1.3e-45 188.0 128 70.3
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 1.1e-44 184.9 160 58.8
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 2.0e-43 180.6 422 29.9
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 3.7e-37 159.8 376 31.6
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 6.4e-37 159.1 111 64.0
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.4e-28 131.3 104 55.8
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.1e-28 129.8 70 77.1
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 2.7e-27 127.1 69 78.3
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.0e-26 125.2 108 51.9
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 3.0e-26 123.6 70 70.0
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 3.0e-26 123.6 70 70.0
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 4.3e-25 119.8 103 56.3
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.3e-23 114.0 102 54.9
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 9.9e-22 108.6 294 27.6
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.3e-21 108.2 68 75.0
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.7e-21 107.8 68 73.5
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.4e-21 105.9 68 72.1
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.4e-20 104.8 113 49.6
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.9e-20 104.4 68 72.1
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 4.6e-19 99.8 58 70.7
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.0e-18 97.1 144 42.4
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.5e-17 94.0 160 41.2
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 8.1e-16 89.0 49 71.4
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.1e-15 87.0 83 51.8
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 5.2e-15 86.3 85 48.2
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.2e-12 77.0 49 65.3
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 1.6e-11 74.7 91 46.2
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 2.1e-11 74.3 61 55.7
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 3.0e-10 70.5 196 32.7


User provided reference genes

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