Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g100480 Pisum sativum HOM05D014873 ORTHO05D015681 0.0e+00 2927.1 1652 100.0
Medtr6g043630 Medicago truncatula HOM05D014873 ORTHO05D015681 5.5e-99 367.5 1570 29.7
Lj2g0026484 Lotus japonicus HOM05D014873 ORTHO05D015681 5.6e-59 234.6 1502 27.0
Psat7g197520 Pisum sativum HOM05D014873 ORTHO05D015681 9.5e-51 207.2 154 74.0
Glyma.02G080700 Glycine max HOM05D028233 ORTHO05D015681 3.5e-45 188.7 875 26.7
TPR.G25870 Trifolium pratense HOM05D014873 ORTHO05D015681 6.6e-44 184.5 257 47.9
Glyma.16G165600 Glycine max HOM05D028233 ORTHO05D015681 1.9e-35 156.4 617 27.1
Medtr6g043620 Medicago truncatula HOM05D014873 ORTHO05D015681 5.1e-28 131.7 526 29.7
TPR.G27612 Trifolium pratense HOM05D014873 ORTHO05D015681 4.8e-26 125.2 422 31.0
Phvul.004G092800 Phaseolus vulgaris HOM05D028233 ORTHO05D015681 1.1e-25 124.0 704 26.6
VMungo0464G2099 Vigna mungo HOM05D028233 ORTHO05D012559 7.9e-21 107.8 352 29.0
TPR.G40146 Trifolium pratense HOM05D014873 ORTHO05D015681 1.7e-15 90.1 152 45.4
Psat5g196200 Pisum sativum HOM05D004426 ORTHO05D005417 2.3e-12 79.7 55 78.2
TPR.G27069 Trifolium pratense HOM05D014873 ORTHO05D015681 2.5e-11 76.3 62 62.9
PGR044G2651 Punica granatum HOM05D012764 ORTHO05D010674 4.8e-10 72.0 56 64.3
THA.LOC104812032 Tarenaya hassleriana HOM05D010491 ORTHO05D010674 2.4e-09 69.7 44 68.2
FAN27G3106 Fragaria x ananassa HOM05D012764 ORTHO05D017940 3.1e-09 69.3 93 39.8
AUR62026679 Chenopodium quinoa HOM05D018884 ORTHO05D010674 3.4e-08 65.9 52 61.5
COL.COLO4_29877 Corchorus olitorius HOM05D013130 ORTHO05D022454 4.5e-08 65.5 61 54.1
FAN20G3084 Fragaria x ananassa HOM05D012764 ORTHO05D017940 7.6e-08 64.7 41 68.3
Prupe.8G035200 Prunus persica HOM05D012764 ORTHO05D017940 7.6e-08 64.7 62 53.2
RcHm_v2.0_Chr6g0274911 Rosa chinensis HOM05D012764 ORTHO05D017940 1.7e-07 63.5 91 38.5
arahy.Tifrunner.gnm1.ann1.UU4M73 Arachis hypogaea HOM05D053442 ORTHO05D010674 2.2e-07 63.2 187 33.2
FAN15G3692 Fragaria x ananassa HOM05D012764 ORTHO05D017940 2.2e-07 63.2 80 43.8
EL10Ac1g01580 Beta vulgaris HOM05D018884 ORTHO05D010674 2.9e-07 62.8 64 53.1
AUR62040588 Chenopodium quinoa HOM05D018884 ORTHO05D010674 4.9e-07 62.0 73 47.9
A07p42390 Brassica napus HOM05D010491 ORTHO05D012559 6.5e-07 61.6 46 69.6
Carub.0002s2365 Capsella rubella HOM05D010491 ORTHO05D012559 8.4e-07 61.2 64 53.1
MD05G1029500 Malus domestica HOM05D012764 ORTHO05D017940 8.4e-07 61.2 87 43.7
FvH4_2g13360 Fragaria vesca HOM05D012764 ORTHO05D017940 1.4e-06 60.5 81 40.7
CSS0012606 Camellia sinensis var. sinensis HOM05D033310 ORTHO05D010674 1.9e-06 60.1 69 50.7
FAN24G2902 Fragaria x ananassa HOM05D012764 ORTHO05D017940 1.9e-06 60.1 81 40.7
arahy.Tifrunner.gnm1.ann1.R835TB Arachis hypogaea HOM05D053442 ORTHO05D010674 2.5e-06 59.7 188 31.9
DCAR_001148 Daucus carota HOM05D033900 ORTHO05D010674 3.2e-06 59.3 88 44.3
RcHm_v2.0_Chr6g0274831 Rosa chinensis HOM05D012764 ORTHO05D010674 3.2e-06 59.3 38 65.8
Thhalv10018017m.g Eutrema salsugineum HOM05D010491 ORTHO05D012559 4.2e-06 58.9 39 66.7
Migut.C00977 Erythranthe guttata HOM05D027784 ORTHO05D010674 5.5e-06 58.5 68 45.6
BraA07t31765Z Brassica rapa HOM05D010491 ORTHO05D012559 7.1e-06 58.2 46 69.6
CANSAT25G2759 Cannabis sativa HOM05D013130 ORTHO05D010674 7.1e-06 58.2 50 58.0
FvH4_2g13370 Fragaria vesca HOM05D012764 ORTHO05D017940 7.1e-06 58.2 97 35.1


User provided reference genes

Program Settings