Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 5.5e-209 730.7 364 100.0
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 6.1e-168 594.3 364 84.1
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 3.7e-165 585.1 364 83.2
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 3.3e-153 545.4 369 78.9
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 4.0e-151 538.5 324 83.3
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 4.0e-151 538.5 360 76.9
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 6.8e-151 537.7 364 78.0
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 8.9e-151 537.3 365 77.3
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 9.5e-145 517.3 358 75.1
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 2.3e-143 512.7 361 73.1
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 1.2e-142 510.4 328 79.0
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 1.2e-142 510.4 313 80.8
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 1.1e-140 503.8 326 77.6
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 1.9e-140 503.1 309 81.6
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 3.2e-140 502.3 360 72.5
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 5.4e-140 501.5 339 76.7
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 1.6e-139 500.0 356 73.0
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 2.7e-139 499.2 306 82.4
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.7e-139 499.2 374 71.7
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 3.5e-139 498.8 364 69.8
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 1.3e-138 496.9 370 70.0
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 1.3e-138 496.9 367 71.4
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 1.7e-138 496.5 334 75.7
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.7e-138 496.5 335 75.5
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.7e-138 496.5 315 79.0
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 6.6e-138 494.6 369 69.6
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 8.6e-138 494.2 364 72.8
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 1.1e-137 493.8 360 72.8
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 1.1e-137 493.8 316 77.2
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 1.1e-137 493.8 344 73.8
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 1.1e-137 493.8 329 77.2
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 1.5e-137 493.4 311 78.8
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 1.9e-137 493.0 368 69.8
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 2.5e-137 492.7 307 79.2
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 3.3e-137 492.3 312 79.5
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 4.3e-137 491.9 368 69.6
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 4.3e-137 491.9 314 77.1
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 5.6e-137 491.5 372 69.6
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 1.2e-136 490.3 335 74.6
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 2.8e-136 489.2 368 69.8
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 3.6e-136 488.8 300 81.0
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 4.7e-136 488.4 328 76.2
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 8.0e-136 487.6 336 74.1
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 1.1e-135 487.3 369 68.8
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.8e-135 486.5 366 68.6
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 2.3e-135 486.1 369 69.4
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 4.0e-135 485.3 350 72.9
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 5.2e-135 485.0 306 77.1
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 6.8e-135 484.6 305 77.7
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 6.8e-135 484.6 367 69.2
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.5e-134 483.4 312 77.9
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 2.6e-134 482.6 363 70.5
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 4.4e-134 481.9 307 78.5
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 5.8e-134 481.5 362 69.6
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 5.8e-134 481.5 299 80.9
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 1.7e-133 479.9 311 77.5
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 3.7e-133 478.8 306 78.1
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 8.3e-133 477.6 311 75.9
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 1.1e-132 477.2 303 78.9
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 2.4e-132 476.1 303 78.5
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 3.2e-132 475.7 300 79.3
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 5.4e-132 474.9 317 76.3
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 7.0e-132 474.6 303 78.9
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 7.0e-132 474.6 303 78.9
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 2.1e-131 473.0 324 76.5
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 7.8e-131 471.1 302 77.8
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 2.3e-130 469.5 311 75.9
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 3.9e-130 468.8 269 83.6
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 5.1e-130 468.4 311 75.6
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 6.6e-130 468.0 292 80.5
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 8.6e-130 467.6 325 73.8
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 1.1e-129 467.2 425 61.4
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 5.6e-129 464.9 309 75.1
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 2.1e-128 463.0 332 72.0
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 8.1e-128 461.1 305 76.7
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 1.8e-127 459.9 275 81.8
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 1.4e-124 450.3 364 66.5
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 4.6e-123 445.3 350 67.7
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 6.0e-123 444.9 305 72.5
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 3.0e-122 442.6 300 73.0
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 1.1e-119 434.1 462 53.2
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 2.6e-118 429.5 466 54.5
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 9.9e-118 427.6 301 71.4
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 7.1e-116 421.4 298 69.5
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 4.6e-115 418.7 306 68.6
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 7.8e-115 417.9 307 68.7
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 1.7e-114 416.8 455 53.0
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 6.2e-112 408.3 310 65.8
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.4e-111 406.4 286 69.2
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 5.6e-105 385.2 215 88.8
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 1.2e-102 377.5 330 60.0
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 4.5e-102 375.6 364 58.8
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 9.9e-102 374.4 293 68.9
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.3e-98 364.0 248 75.4
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 1.1e-89 334.3 201 83.1
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 9.6e-89 331.3 366 53.0
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 3.4e-86 322.8 320 53.4
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 5.8e-86 322.0 166 97.0
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 3.0e-82 309.7 169 92.3
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 3.3e-81 306.2 201 79.1
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 4.5e-78 295.8 243 65.4
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 6.5e-77 292.0 243 65.0
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.5e-76 290.0 193 78.2
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 5.5e-76 288.9 193 77.7
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.0e-74 284.6 192 76.6
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 3.0e-74 283.1 257 53.3
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 7.4e-73 278.5 168 83.9
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 2.9e-69 266.5 144 88.2
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 3.2e-68 263.1 150 86.0
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 7.0e-63 245.4 188 68.1
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.5e-60 235.7 259 48.6
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.4e-55 220.3 211 56.9
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.6e-51 207.6 141 72.3
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.7e-45 187.6 108 86.1
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 5.0e-37 159.5 97 76.3
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 7.0e-31 139.0 107 60.7
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 7.8e-30 135.6 80 83.8
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 8.6e-29 132.1 236 35.6
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.1e-23 115.2 113 48.7
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.5e-22 110.2 242 33.1
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 1.2e-17 95.1 50 84.0
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.2e-11 75.1 58 67.2
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 1.3e-08 65.1 71 49.3


User provided reference genes

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