Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g099640 Pisum sativum HOM05D007036 ORTHO05D008885 2.2e-213 745.3 371 100.0
TPR.G36679 Trifolium pratense HOM05D007036 ORTHO05D008885 4.5e-166 588.2 373 79.1
Medtr0004s0610 Medicago truncatula HOM05D007036 ORTHO05D008885 2.2e-165 585.9 362 80.7
Medtr1g051205 Medicago truncatula HOM05D007036 ORTHO05D008885 5.6e-161 571.2 361 78.9
Medtr5g068170 Medicago truncatula HOM05D007036 ORTHO05D008885 3.6e-139 498.8 327 76.8
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 2.3e-138 496.1 337 70.9
Lalb_Chr19g0129471 Lupinus albus HOM05D007036 ORTHO05D008885 2.5e-132 476.1 334 68.9
Phvul.010G069800 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 6.7e-130 468.0 337 67.1
Phvul.011G085400 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 2.0e-129 466.5 366 64.2
Glyma.01G132800 Glycine max HOM05D007036 ORTHO05D008885 9.7e-129 464.2 363 63.1
Glyma.03G035400 Glycine max HOM05D007036 ORTHO05D008885 1.7e-128 463.4 350 65.7
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 4.8e-128 461.8 337 66.5
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 1.8e-127 459.9 337 65.6
Cfa020750 Carpinus fangiana HOM05D007036 ORTHO05D008885 1.6e-123 446.8 335 65.4
VMungo0331G1618 Vigna mungo HOM05D007036 ORTHO05D008885 1.4e-122 443.7 335 65.1
Haze_19103 Corylus avellana HOM05D007036 ORTHO05D008885 2.3e-122 443.0 335 64.5
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 2.6e-121 439.5 336 63.7
TWI34G0744 Tripterygium wilfordii HOM05D007036 ORTHO05D008885 2.2e-120 436.4 335 63.0
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 4.1e-119 432.2 336 62.5
CSS0020574 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 1.2e-118 430.6 329 62.0
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 5.9e-118 428.3 336 61.9
CsaV3_2G009100 Cucumis sativus L. HOM05D007036 ORTHO05D008885 1.3e-117 427.2 336 61.9
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 1.3e-117 427.2 336 60.7
ClCG11G011370 Citrullus lanatus HOM05D007036 ORTHO05D008885 1.7e-117 426.8 336 62.5
vmacro22700 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 4.2e-116 422.2 335 61.2
MELO3C003928.2 Cucumis melo HOM05D007036 ORTHO05D008885 5.5e-116 421.8 336 61.6
Atru.chr7.958 Acer truncatum HOM05D007036 ORTHO05D008885 7.2e-116 421.4 335 61.5
CANSAT80G2763 Cannabis sativa HOM05D007036 ORTHO05D008885 7.2e-116 421.4 344 59.0
Rhsim01G0110100 Rhododendron simsii HOM05D007036 ORTHO05D008885 3.6e-115 419.1 334 61.7
Sed0028219 Sechium edule HOM05D007036 ORTHO05D008885 8.0e-115 417.9 336 61.3
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 1.0e-114 417.5 335 61.2
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 2.3e-114 416.4 335 61.5
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 2.6e-113 412.9 336 60.4
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 4.4e-113 412.1 337 59.9
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 7.5e-113 411.4 367 56.1
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 3.7e-112 409.1 336 59.5
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 1.4e-111 407.1 336 59.2
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 1.8e-111 406.8 336 59.2
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 7.0e-111 404.8 335 59.1
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 1.6e-110 403.7 336 59.5
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 7.7e-110 401.4 323 61.9
Potri.018G146900 Populus trichocarpa HOM05D007036 ORTHO05D008885 1.5e-108 397.1 335 59.1
AUR62029463 Chenopodium quinoa HOM05D007036 ORTHO05D008885 2.5e-108 396.4 314 59.6
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 2.5e-108 396.4 335 59.4
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 7.2e-108 394.8 336 58.0
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 1.2e-107 394.0 337 59.3
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 8.0e-107 391.3 335 57.9
Aa31LG4G9890 Aethionema arabicum HOM05D007036 ORTHO05D008885 4.0e-106 389.0 343 56.9
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 4.0e-106 389.0 335 57.9
CSS0014683 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 2.0e-105 386.7 285 64.6
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 5.7e-105 385.2 335 54.9
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 1.3e-104 384.0 313 59.7
Ah.07g208320 Amaranthus hybridus HOM05D007036 ORTHO05D008885 3.7e-104 382.5 319 57.4
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 4.1e-103 379.0 315 60.0
AT3G42630 Arabidopsis thaliana HOM05D007036 ORTHO05D008885 7.0e-103 378.3 336 54.8
HanXRQChr09g0261951 Helianthus annuus HOM05D007036 ORTHO05D008885 1.6e-102 377.1 360 53.3
Sp5g14950 Schrenkiella parvula HOM05D007036 ORTHO05D008885 1.6e-102 377.1 336 54.8
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 4.5e-102 375.6 336 54.2
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 1.1e-100 370.9 335 55.8
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 1.1e-100 370.9 362 52.2
AL5G20840 Arabidopsis lyrata HOM05D007036 ORTHO05D008885 1.9e-100 370.2 336 54.2
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 1.9e-100 370.2 372 51.9
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 2.5e-100 369.8 333 55.6
Carub.0001s3409 Capsella rubella HOM05D007036 ORTHO05D008885 3.3e-100 369.4 336 56.0
VMungo0540G1720 Vigna mungo HOM05D007036 ORTHO05D008885 1.6e-99 367.1 247 70.4
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 2.8e-99 366.3 333 55.6
BcaC01g01887 Brassica carinata HOM05D007036 ORTHO05D008885 1.4e-98 364.0 336 54.2
CSS0018855 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 1.8e-98 363.6 329 55.0
BcaB01g00982 Brassica carinata HOM05D007036 ORTHO05D008885 2.3e-98 363.2 336 54.8
C03p70950 Brassica napus HOM05D007036 ORTHO05D008885 5.2e-98 362.1 336 54.2
A06p20770 Brassica napus HOM05D007036 ORTHO05D008885 6.8e-98 361.7 336 53.3
BraA06t25155Z Brassica rapa HOM05D007036 ORTHO05D008885 1.5e-97 360.5 336 53.6
BolC3t19373H Brassica oleracea HOM05D007036 ORTHO05D008885 2.6e-97 359.8 336 53.9
Carub.0016s0003 Capsella rubella HOM05D007036 ORTHO05D008885 1.7e-96 357.1 327 53.5
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 1.4e-95 354.0 334 54.8
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 5.4e-95 352.1 365 50.4
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 2.0e-94 350.1 247 68.4
Ca_04679_v3 Cicer arietinum L. HOM05D007036 ORTHO05D008885 2.7e-94 349.7 219 78.1
CARHR153640 Cardamine hirsuta HOM05D007036 ORTHO05D008885 1.0e-93 347.8 336 52.1
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 1.0e-93 347.8 336 53.6
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 2.3e-93 346.7 316 53.5
SGA_v2.0_scaffold318G48469 Striga asiatica HOM05D007036 ORTHO05D008885 4.3e-92 342.4 335 51.9
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 9.5e-92 341.3 336 52.7
MD13G1233100 Malus domestica HOM05D007036 ORTHO05D008885 6.2e-91 338.6 376 49.5
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 8.9e-90 334.7 238 66.8
GSVIVG01032259001 Vitis vinifera HOM05D007036 ORTHO05D008885 1.2e-89 334.3 233 69.5
Thhalv10003041m.g Eutrema salsugineum HOM05D007036 ORTHO05D008885 4.4e-89 332.4 334 50.0
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 3.2e-87 326.2 335 50.7
DCAR_020462 Daucus carota HOM05D007036 ORTHO05D008885 1.6e-86 323.9 336 50.0
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 3.5e-86 322.8 332 49.7
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 7.8e-86 321.6 332 48.8
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 9.5e-84 314.7 233 65.2
CiPaw.16G103900 Carya illinoinensis HOM05D007036 ORTHO05D008885 1.2e-83 314.3 210 73.3
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 1.8e-82 310.5 335 49.0
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 1.2e-81 307.8 209 71.3
PSO063G5690 Papaver somniferum HOM05D007036 ORTHO05D008885 1.2e-75 287.7 303 49.5
COL.COLO4_04221 Corchorus olitorius HOM05D007036 ORTHO05D008885 6.4e-72 275.4 335 46.6
Eucgr.C00064 Eucalyptus grandis HOM05D007036 ORTHO05D008885 6.4e-72 275.4 249 55.4
CDE04G2486 Ceratophyllum demersum HOM05D007036 ORTHO05D008885 1.1e-71 274.6 292 49.3
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 1.1e-71 274.6 299 45.2
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 6.2e-67 258.8 206 62.6
COL.COLO4_06173 Corchorus olitorius HOM05D007036 ORTHO05D008885 5.1e-61 239.2 307 44.6
Oeu028822.1 Olea europaea HOM05D007036 ORTHO05D008885 1.2e-46 191.4 153 58.8
Lj5A765T51 Lonicera japonica HOM05D007036 ORTHO05D008885 1.8e-45 187.6 173 52.0
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 4.5e-41 172.9 232 42.7
vmacro20769 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 4.6e-38 162.9 114 67.5
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 2.5e-36 157.1 149 52.3
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 2.0e-33 147.5 176 43.2
Dinv26474 Davidia involucrata HOM05D007036 ORTHO05D008885 1.3e-27 128.3 197 37.6
AagrBONN_evm.TU.Sc2ySwM_228.1431 Anthoceros agrestis HOM05D007036 ORTHO05D008885 1.9e-23 114.4 132 43.9
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 1.4e-15 88.2 164 36.0
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 2.7e-14 84.0 246 28.9
Medtr6g034745 Medicago truncatula HOM05D007036 ORTHO05D008885 2.3e-13 80.9 47 78.7
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 3.3e-12 77.0 182 31.9
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 7.4e-12 75.9 200 30.0
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 1.3e-11 75.1 197 31.5
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 2.8e-11 73.9 200 29.5
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 2.8e-11 73.9 186 32.8
Carub.0007s2820 Capsella rubella HOM05D007897 ORTHO05D010061 1.4e-10 71.6 186 29.6
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 1.4e-10 71.6 185 31.4
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 1.8e-10 71.2 197 27.4
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 1.8e-10 71.2 185 31.9
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 2.4e-10 70.9 198 30.8
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 2.4e-10 70.9 198 30.8
THA.LOC104808674 Tarenaya hassleriana HOM05D007897 ORTHO05D010061 5.3e-10 69.7 153 31.4
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 1.6e-09 68.2 192 28.6
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 2.6e-09 67.4 173 30.6
TAR633G2792 Trochodendron aralioides HOM05D007897 ORTHO05D010061 1.0e-08 65.5 190 27.4
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 2.2e-08 64.3 183 32.2
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 5.0e-08 63.2 183 31.7
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 8.5e-08 62.4 200 31.0
Sabra14G0112700 Salix brachista HOM05D007897 ORTHO05D010061 1.9e-07 61.2 187 27.3
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 2.5e-07 60.8 157 33.1
TAR633G2399 Trochodendron aralioides HOM05D007897 ORTHO05D010061 2.5e-07 60.8 159 29.6
Duzib212G0894 Durio zibethinus HOM05D007897 ORTHO05D010061 4.2e-07 60.1 212 27.8
FAN22G1341 Fragaria x ananassa HOM05D007897 ORTHO05D010061 5.5e-07 59.7 156 28.8
Potri.014G149500 Populus trichocarpa HOM05D007897 ORTHO05D010061 7.2e-07 59.3 187 26.2
CBR_g10841 Chara braunii HOM05D001779 ORTHO05D001753 9.4e-07 58.9 109 28.4
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 3.6e-06 57.0 166 27.7


User provided reference genes

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