Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g098720 Pisum sativum HOM05D004678 ORTHO05D005880 1.7e-185 652.5 324 100.0
TPR.G36715 Trifolium pratense HOM05D004678 ORTHO05D005880 7.7e-138 494.2 342 76.3
Medtr6g033540 Medicago truncatula HOM05D004678 ORTHO05D005880 2.3e-134 482.6 338 74.6
Phvul.004G083900 Phaseolus vulgaris HOM05D004678 ORTHO05D005880 8.8e-134 480.7 347 72.0
Glyma.16G155800 Glycine max HOM05D004678 ORTHO05D005880 4.3e-133 478.4 348 71.0
Ca_07561_v3 Cicer arietinum L. HOM05D004678 ORTHO05D005880 9.7e-133 477.2 340 72.6
VMungo0464G0500 Vigna mungo HOM05D004678 ORTHO05D005880 1.7e-132 476.5 347 71.2
LjContig00222g0007085 Lotus japonicus HOM05D004678 ORTHO05D005880 7.7e-130 467.6 337 73.6
Lalb_Chr01g0010011 Lupinus albus HOM05D004678 ORTHO05D005880 2.5e-128 462.6 311 76.5
CiPaw.16G062100 Carya illinoinensis HOM05D004678 ORTHO05D005880 2.4e-123 446.0 350 67.7
Aqoxy6G00120 Aquilegia oxysepala HOM05D004678 ORTHO05D005880 4.1e-123 445.3 312 71.2
CSS0026818 Camellia sinensis var. sinensis HOM05D004678 ORTHO05D005880 1.2e-122 443.7 344 67.7
Cfa018194 Carpinus fangiana HOM05D004678 ORTHO05D005880 1.5e-122 443.4 311 73.0
QL02p033997 Quercus lobata HOM05D004678 ORTHO05D005880 2.6e-122 442.6 314 71.0
QL04p000013 Quercus lobata HOM05D004678 ORTHO05D005880 1.0e-121 440.7 314 71.0
TAR381G1101 Trochodendron aralioides HOM05D004678 ORTHO05D005880 1.3e-121 440.3 308 73.4
PGR142G3802 Punica granatum HOM05D004678 ORTHO05D005880 5.0e-121 438.3 317 69.4
Potri.013G113900 Populus trichocarpa HOM05D004678 ORTHO05D005880 6.5e-121 438.0 316 69.6
QL04p003199 Quercus lobata HOM05D004678 ORTHO05D005880 3.2e-120 435.6 329 68.4
ClCG09G010470 Citrullus lanatus HOM05D004678 ORTHO05D005880 5.5e-120 434.9 346 66.8
Manes.02G191200 Manihot esculenta HOM05D004678 ORTHO05D005880 5.5e-120 434.9 311 70.4
CiPaw.15G082000 Carya illinoinensis HOM05D004678 ORTHO05D005880 9.4e-120 434.1 310 71.3
Zm00001eb252330 Zea mays HOM05D004678 ORTHO05D005880 9.4e-120 434.1 330 67.9
MD12G1021300 Malus domestica HOM05D004678 ORTHO05D005880 1.2e-119 433.7 312 71.5
Sabra13G0096400 Salix brachista HOM05D004678 ORTHO05D005880 2.1e-119 433.0 320 69.1
TWI34G1123 Tripterygium wilfordii HOM05D004678 ORTHO05D005880 2.1e-119 433.0 342 66.4
Ciclev10001274m.g Citrus clementina HOM05D004678 ORTHO05D005880 3.6e-119 432.2 314 70.7
Eucgr.G01597 Eucalyptus grandis HOM05D004678 ORTHO05D005880 4.7e-119 431.8 314 69.1
Sc23g0001180 Simmondsia chinensis HOM05D004678 ORTHO05D005880 6.1e-119 431.4 353 64.0
Eucgr.L00028 Eucalyptus grandis HOM05D004678 ORTHO05D005880 8.0e-119 431.0 314 68.5
CANSAT21G1357 Cannabis sativa HOM05D004678 ORTHO05D005880 1.0e-118 430.6 311 69.8
ATR0152G001 Amborella trichopoda HOM05D004678 ORTHO05D005880 3.0e-118 429.1 301 72.1
HPP92_016059 Vanilla planifolia HOM05D004678 ORTHO05D005880 5.2e-118 428.3 338 65.1
ClCG07G016110 Citrullus lanatus HOM05D004678 ORTHO05D005880 8.8e-118 427.6 346 65.3
Hma1.2p1_1487F.1_g286570 Hydrangea macrophylla HOM05D004678 ORTHO05D005880 3.3e-117 425.6 357 64.1
RcHm_v2.0_Chr1g0322001 Rosa chinensis HOM05D004678 ORTHO05D005880 3.3e-117 425.6 342 67.0
SalBow2G0558 Salvia bowleyana HOM05D004678 ORTHO05D005880 3.3e-117 425.6 309 69.6
SalBow2G2825 Salvia bowleyana HOM05D004678 ORTHO05D005880 3.3e-117 425.6 309 69.6
Hund27082 Selenicereus undatus HOM05D004678 ORTHO05D005880 3.3e-117 425.6 344 65.4
FAN10G3317 Fragaria x ananassa HOM05D004678 ORTHO05D005880 4.4e-117 425.2 339 65.8
FvH4_7g02740 Fragaria vesca HOM05D004678 ORTHO05D005880 5.7e-117 424.9 339 65.5
DCAR_026915 Daucus carota HOM05D004678 ORTHO05D005880 7.4e-117 424.5 308 71.1
FAN06G1846 Fragaria x ananassa HOM05D004678 ORTHO05D005880 7.4e-117 424.5 339 65.5
Hund16801 Selenicereus undatus HOM05D004678 ORTHO05D005880 7.4e-117 424.5 339 64.9
MELO3C023659.2 Cucumis melo HOM05D004678 ORTHO05D005880 9.7e-117 424.1 318 68.6
AUR62023572 Chenopodium quinoa HOM05D004678 ORTHO05D005880 2.2e-116 422.9 352 62.5
FAN03G3192 Fragaria x ananassa HOM05D004678 ORTHO05D005880 2.8e-116 422.5 339 65.2
Hma1.2p1_0285F.1_g113940 Hydrangea macrophylla HOM05D004678 ORTHO05D005880 2.8e-116 422.5 323 68.4
Peaxi162Scf00760g00021 Petunia axillaris HOM05D004678 ORTHO05D005880 3.7e-116 422.2 344 66.0
Solyc04g009350.3 Solanum lycopersicum HOM05D004678 ORTHO05D005880 3.7e-116 422.2 339 67.0
Sed0015109 Sechium edule HOM05D004678 ORTHO05D005880 4.8e-116 421.8 295 72.2
Nitab4.5_0002113g0110 Nicotiana tabacum HOM05D004678 ORTHO05D005880 6.3e-116 421.4 349 64.5
GSVIVG01034496001 Vitis vinifera HOM05D004678 ORTHO05D005880 6.3e-116 421.4 299 71.2
Sopen04g004470 Solanum pennellii HOM05D004678 ORTHO05D005880 8.2e-116 421.0 339 66.7
TWI32G0349 Tripterygium wilfordii HOM05D004678 ORTHO05D005880 8.2e-116 421.0 307 69.7
Dinv30099 Davidia involucrata HOM05D004678 ORTHO05D005880 1.4e-115 420.2 306 70.9
Atru.chr13.1797 Acer truncatum HOM05D004678 ORTHO05D005880 2.4e-115 419.5 308 72.1
CsaV3_7G024070 Cucumis sativus L. HOM05D004678 ORTHO05D005880 2.4e-115 419.5 347 65.4
Duzib177G0967 Durio zibethinus HOM05D004678 ORTHO05D005880 2.4e-115 419.5 302 71.2
Actinidia04312 Actinidia chinensis HOM05D004678 ORTHO05D005880 3.1e-115 419.1 345 64.3
Gohir.A09G117500 Gossypium hirsutum HOM05D004678 ORTHO05D005880 4.1e-115 418.7 347 64.8
Lj3A851T66 Lonicera japonica HOM05D004678 ORTHO05D005880 4.1e-115 418.7 373 62.2
PSO017G6114 Papaver somniferum HOM05D004678 ORTHO05D005880 4.1e-115 418.7 329 66.9
Prupe.6G194700 Prunus persica HOM05D004678 ORTHO05D005880 4.1e-115 418.7 341 64.5
PGSC0003DMG400032541 Solanum tuberosum HOM05D004678 ORTHO05D005880 5.3e-115 418.3 341 66.0
Cc02_g14680 Coffea canephora HOM05D004678 ORTHO05D005880 9.1e-115 417.5 335 65.4
PSO063G1958 Papaver somniferum HOM05D004678 ORTHO05D005880 1.6e-114 416.8 329 66.9
EL10Ac1g00076 Beta vulgaris HOM05D004678 ORTHO05D005880 2.6e-114 416.0 333 65.8
Os02g0709200 Oryza sativa ssp. japonica HOM05D004678 ORTHO05D005880 3.5e-114 415.6 321 67.3
Gohir.D09G114300 Gossypium hirsutum HOM05D004678 ORTHO05D005880 4.5e-114 415.2 307 69.4
Gorai.006G132200 Gossypium raimondii HOM05D004678 ORTHO05D005880 4.5e-114 415.2 307 69.4
Thecc.08G181800 Theobroma cacao HOM05D004678 ORTHO05D005880 5.9e-114 414.8 303 70.3
Oeu044536.1 Olea europaea HOM05D004678 ORTHO05D005880 1.7e-113 413.3 328 66.2
HanXRQChr14g0428861 Helianthus annuus HOM05D004678 ORTHO05D005880 2.2e-113 412.9 324 68.2
MSTRG.13391 Avicennia marina HOM05D004678 ORTHO05D005880 8.5e-113 411.0 288 71.9
Migut.L01374 Erythranthe guttata HOM05D004678 ORTHO05D005880 3.2e-112 409.1 331 64.0
HanXRQChr06g0184941 Helianthus annuus HOM05D004678 ORTHO05D005880 4.2e-112 408.7 328 67.7
Nitab4.5_0007261g0010 Nicotiana tabacum HOM05D004678 ORTHO05D005880 4.2e-112 408.7 377 59.7
Cpa.g.sc36.40 Carica papaya HOM05D004678 ORTHO05D005880 1.6e-111 406.8 354 63.0
Lsat_1_v5_gn_9_80761 Lactuca sativa HOM05D004678 ORTHO05D005880 3.6e-111 405.6 310 68.1
unitig_699.g19496 Utricularia gibba HOM05D004678 ORTHO05D005880 6.1e-111 404.8 295 68.1
ECA236G1055 Erigeron canadensis HOM05D004678 ORTHO05D005880 8.0e-111 404.4 314 69.1
CAN.G624.22 Capsicum annuum HOM05D004678 ORTHO05D005880 3.0e-110 402.5 316 67.1
COL.COLO4_19882 Corchorus olitorius HOM05D004678 ORTHO05D005880 3.0e-110 402.5 289 70.9
SGA_v2.0_scaffold8G04287 Striga asiatica HOM05D004678 ORTHO05D005880 4.0e-110 402.1 322 65.5
AL2G31530 Arabidopsis lyrata HOM05D004678 ORTHO05D005880 5.2e-110 401.7 345 62.6
AT5G10330 Arabidopsis thaliana HOM05D004678 ORTHO05D005880 5.2e-110 401.7 342 63.5
CDE04G3296 Ceratophyllum demersum HOM05D004678 ORTHO05D005880 5.2e-110 401.7 310 66.5
Thhalv10007345m.g Eutrema salsugineum HOM05D004678 ORTHO05D005880 5.2e-110 401.7 342 62.9
THA.LOC104800109 Tarenaya hassleriana HOM05D004678 ORTHO05D005880 2.6e-109 399.4 346 62.1
Sp5g26990 Schrenkiella parvula HOM05D004678 ORTHO05D005880 3.4e-109 399.1 341 63.0
Carub.0002s1870 Capsella rubella HOM05D004678 ORTHO05D005880 1.7e-108 396.7 342 63.7
arahy.Tifrunner.gnm1.ann1.7PLX29 Arachis hypogaea HOM05D004678 ORTHO05D005880 2.2e-108 396.4 351 61.8
BcaB03g14912 Brassica carinata HOM05D004678 ORTHO05D005880 2.8e-108 396.0 335 63.6
Rhsim09G0073000 Rhododendron simsii HOM05D004678 ORTHO05D005880 4.8e-108 395.2 372 59.1
AT1G71920 Arabidopsis thaliana HOM05D004678 ORTHO05D005880 7.0e-107 391.3 342 62.6
BcaC08g46628 Brassica carinata HOM05D004678 ORTHO05D005880 7.0e-107 391.3 332 63.3
arahy.Tifrunner.gnm1.ann1.57RIKC Arachis hypogaea HOM05D004678 ORTHO05D005880 1.2e-106 390.6 311 67.2
BcaC03g15310 Brassica carinata HOM05D004678 ORTHO05D005880 1.2e-106 390.6 297 68.0
BraA07t31374Z Brassica rapa HOM05D004678 ORTHO05D005880 2.0e-106 389.8 343 61.2
CARHR064740 Cardamine hirsuta HOM05D004678 ORTHO05D005880 5.9e-106 388.3 331 61.3
A07p38090 Brassica napus HOM05D004678 ORTHO05D005880 1.3e-105 387.1 337 61.4
BcaB05g24693 Brassica carinata HOM05D004678 ORTHO05D005880 2.9e-105 386.0 285 70.5
Aa31LG4G8700 Aethionema arabicum HOM05D004678 ORTHO05D005880 6.5e-105 384.8 288 69.1
BraA02t06800Z Brassica rapa HOM05D004678 ORTHO05D005880 6.5e-105 384.8 298 67.1
A02p17560 Brassica napus HOM05D004678 ORTHO05D005880 1.9e-104 383.3 298 66.8
BcaC08g46629 Brassica carinata HOM05D004678 ORTHO05D005880 2.5e-104 382.9 281 69.4
C02p29210 Brassica napus HOM05D004678 ORTHO05D005880 7.2e-104 381.3 310 65.2
BolC2t08971H Brassica oleracea HOM05D004678 ORTHO05D005880 7.2e-104 381.3 310 65.2
C06p45990 Brassica napus HOM05D004678 ORTHO05D005880 2.7e-103 379.4 332 62.0
BolC6t39653H Brassica oleracea HOM05D004678 ORTHO05D005880 2.7e-103 379.4 332 62.0
Ah.05g178040 Amaranthus hybridus HOM05D004678 ORTHO05D005880 3.6e-103 379.0 384 55.7
Haze_17921 Corylus avellana HOM05D004678 ORTHO05D005880 2.8e-100 369.4 352 58.0
Pp3c19_9420 Physcomitrium patens HOM05D004678 ORTHO05D005880 7.7e-98 361.3 290 61.7
AUR62004653 Chenopodium quinoa HOM05D004678 ORTHO05D005880 4.2e-96 355.5 345 56.2
Mapoly0007s0122 Marchantia polymorpha HOM05D004678 ORTHO05D005880 1.2e-93 347.4 287 61.0
Ca_29915_v3 Cicer arietinum L. HOM05D004678 ORTHO05D005880 1.5e-93 347.1 252 71.8
SMO343G0150 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 9.8e-93 344.4 285 61.8
Medtr6g033600 Medicago truncatula HOM05D004678 ORTHO05D005880 3.5e-90 335.9 188 86.7
BcaB05g24692 Brassica carinata HOM05D004678 ORTHO05D005880 6.6e-89 331.6 285 62.5
Cre16.g672385 Chlamydomonas reinhardtii HOM05D004678 ORTHO05D005880 6.1e-87 325.1 299 56.5
HPP92_016095 Vanilla planifolia HOM05D004678 ORTHO05D005880 6.0e-82 308.5 325 52.9
PRCOL_00004069 Prasinoderma coloniale HOM05D004678 ORTHO05D005880 1.1e-80 304.3 278 55.0
Sopen11g017200 Solanum pennellii HOM05D004678 ORTHO05D005880 6.2e-79 298.5 218 68.8
MCO01G265 Micromonas commoda HOM05D004678 ORTHO05D005880 1.4e-78 297.4 302 52.3
Nn6g34909 Nelumbo nucifera HOM05D004678 ORTHO05D005880 1.2e-77 294.3 263 60.1
AagrBONN_evm.TU.Sc2ySwM_362.1592 Anthoceros agrestis HOM05D004678 ORTHO05D005880 8.9e-70 268.1 189 69.3
MD14G1018500 Malus domestica HOM05D004678 ORTHO05D005880 4.9e-68 262.3 341 48.1
CDE07G1916 Ceratophyllum demersum HOM05D004678 ORTHO05D005880 3.0e-57 226.5 179 65.4
Cfa005301 Carpinus fangiana HOM05D004678 ORTHO05D005880 1.6e-55 220.7 178 65.7
Cfa009297 Carpinus fangiana HOM05D004678 ORTHO05D005880 1.8e-54 217.2 179 64.2
TAR629G2521 Trochodendron aralioides HOM05D004678 ORTHO05D005880 3.4e-53 213.0 235 54.9
GSVIVG01025260001 Vitis vinifera HOM05D004678 ORTHO05D005880 1.8e-41 174.1 107 80.4
MBI17_g38771_MAGBIO Magnolia biondii HOM05D004678 ORTHO05D005880 4.3e-40 169.5 161 55.9
MBI17_g42088_MAGBIO Magnolia biondii HOM05D004678 ORTHO05D005880 4.3e-40 169.5 161 55.9
Prupe.8G056800 Prunus persica HOM05D004678 ORTHO05D005880 2.2e-36 157.1 272 40.8
SHI09055 Sapria himalayana HOM05D004678 ORTHO05D005880 1.9e-35 154.1 94 78.7
Psat0s2699g0120 Pisum sativum HOM05D004678 ORTHO05D005880 7.1e-35 152.1 79 92.4
Nitab4.5_0003152g0020 Nicotiana tabacum HOM05D004678 ORTHO05D005880 5.7e-32 142.5 321 34.3
Solyc11g040030.3 Solanum lycopersicum HOM05D004678 ORTHO05D005880 4.8e-31 139.4 171 49.7
GSVIVG01025261001 Vitis vinifera HOM05D004678 ORTHO05D005880 2.2e-28 130.6 124 54.8
DCAR_023441 Daucus carota HOM05D004678 ORTHO05D005880 3.8e-28 129.8 82 78.0
CBR_g40358 Chara braunii HOM05D000019 ORTHO05D000048 4.2e-27 126.3 131 51.1
SMO367G0035 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 8.7e-25 118.6 128 50.0
CDE07G1051 Ceratophyllum demersum HOM05D004678 ORTHO05D043902 1.0e-20 105.1 83 65.1
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 8.5e-20 102.1 96 58.3
Cfa024628 Carpinus fangiana HOM05D004678 ORTHO05D005880 1.2e-18 98.2 157 36.3
SMO035G0001 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 1.0e-17 95.1 182 41.2
SMO343G0161 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 5.1e-17 92.8 97 51.5
Psat0s2699g0200 Pisum sativum HOM05D004678 ORTHO05D043902 1.1e-16 91.7 50 90.0
CAN.G137.23 Capsicum annuum HOM05D004678 ORTHO05D000493 2.0e-13 80.9 54 74.1
CBR_g36553 Chara braunii HOM05D003605 ORTHO05D003078 4.7e-10 69.7 151 32.5
VMungo1309G1294 Vigna mungo HOM05D002771 ORTHO05D003078 6.7e-09 65.9 168 25.0
SHI09056 Sapria himalayana HOM05D004678 ORTHO05D005880 2.0e-08 64.3 50 66.0
Phvul.009G122800 Phaseolus vulgaris HOM05D002771 ORTHO05D003078 9.7e-08 62.0 168 25.6
Nitab4.5_0001520g0040 Nicotiana tabacum HOM05D004678 ORTHO05D012214 1.7e-07 61.2 28 96.4
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 4.8e-07 59.7 245 25.3
PGSC0003DMG400008416 Solanum tuberosum HOM05D004678 ORTHO05D005880 2.4e-06 57.4 126 36.5
SHI09057 Sapria himalayana HOM05D004678 ORTHO05D005880 5.3e-06 56.2 51 51.0
Lj1A20T48 Lonicera japonica HOM05D002771 ORTHO05D003078 7.0e-06 55.8 189 24.9


User provided reference genes

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