Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g086800 Pisum sativum HOM05D007995 ORTHO05D001819 3.2e-93 345.1 179 100.0
Medtr8g032810 Medicago truncatula HOM05D007995 ORTHO05D001819 1.3e-51 206.8 179 61.5
TPR.G32889 Trifolium pratense HOM05D007995 ORTHO05D001819 4.3e-50 201.8 179 60.9
TPR.G28273 Trifolium pratense HOM05D007995 ORTHO05D001819 1.3e-49 200.3 177 59.9
TPR.G16193 Trifolium pratense HOM05D007995 ORTHO05D001819 2.7e-44 182.6 177 55.9
Medtr4g025010 Medicago truncatula HOM05D007995 ORTHO05D001819 6.1e-44 181.4 180 54.4
Ca_06775_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 5.1e-43 178.3 180 52.2
Medtr6g024040 Medicago truncatula HOM05D007995 ORTHO05D001819 1.3e-41 173.7 180 53.9
Medtr6g024035 Medicago truncatula HOM05D007995 ORTHO05D001819 4.1e-40 168.7 176 54.0
Psat3g149840 Pisum sativum HOM05D007995 ORTHO05D001819 2.7e-36 156.0 176 52.8
Medtr6g024020 Medicago truncatula HOM05D007995 ORTHO05D001819 1.4e-35 153.7 177 49.2
Ca_31166_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.3e-33 147.1 147 51.7
Lalb_Chr04g0256671 Lupinus albus HOM05D007995 ORTHO05D001819 3.2e-29 132.5 172 44.2
Lalb_Chr16g0386221 Lupinus albus HOM05D007995 ORTHO05D001819 5.5e-29 131.7 177 44.1
Lalb_Chr14g0367641 Lupinus albus HOM05D007995 ORTHO05D001819 7.2e-29 131.3 172 41.9
Lalb_Chr16g0386271 Lupinus albus HOM05D007995 ORTHO05D001819 7.2e-29 131.3 172 44.2
Lalb_Chr16g0386201 Lupinus albus HOM05D007995 ORTHO05D001819 9.4e-29 131.0 177 43.5
Glyma.15G207000 Glycine max HOM05D007995 ORTHO05D001819 4.7e-28 128.6 174 44.8
Glyma.15G207100 Glycine max HOM05D007995 ORTHO05D001819 4.7e-28 128.6 174 44.8
Lalb_Chr16g0386301 Lupinus albus HOM05D007995 ORTHO05D001819 1.0e-27 127.5 172 41.9
Medtr6g023995 Medicago truncatula HOM05D007995 ORTHO05D001819 4.4e-26 122.1 156 45.5
VMungo0720G2167 Vigna mungo HOM05D007995 ORTHO05D001819 5.7e-26 121.7 180 42.2
TPR.G30439 Trifolium pratense HOM05D007995 ORTHO05D001819 7.4e-26 121.3 178 42.1
TPR.G30442 Trifolium pratense HOM05D007995 ORTHO05D001819 7.4e-26 121.3 177 44.6
Lalb_Chr22g0356081 Lupinus albus HOM05D007995 ORTHO05D001819 3.7e-25 119.0 174 38.5
Lj3g0018744 Lotus japonicus HOM05D007995 ORTHO05D001819 4.8e-25 118.6 177 41.2
Ca_28343_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 3.1e-24 115.9 181 43.1
Lalb_Chr22g0356001 Lupinus albus HOM05D007995 ORTHO05D001819 5.3e-24 115.2 152 42.8
TPR.G33129 Trifolium pratense HOM05D007995 ORTHO05D001819 9.1e-24 114.4 177 40.7
Ca_14013_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 2.0e-23 113.2 178 39.3
Medtr6g023905 Medicago truncatula HOM05D007995 ORTHO05D001819 2.0e-23 113.2 178 38.2
TPR.G36428 Trifolium pratense HOM05D007995 ORTHO05D001819 4.5e-23 112.1 171 43.9
Ca_17116_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.7e-22 110.2 179 40.2
Phvul.007G271650 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 1.7e-22 110.2 176 39.8
Medtr6g023915 Medicago truncatula HOM05D007995 ORTHO05D001819 2.2e-22 109.8 179 38.5
TPR.G16188 Trifolium pratense HOM05D007995 ORTHO05D001819 2.9e-22 109.4 175 39.4
Medtr6g023935 Medicago truncatula HOM05D007995 ORTHO05D001819 8.5e-22 107.8 179 39.1
Ca_31346_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.5e-21 107.1 173 38.2
Ca_31352_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 2.5e-21 106.3 173 36.4
Lalb_Chr14g0366281 Lupinus albus HOM05D007995 ORTHO05D001819 2.5e-21 106.3 171 37.4
Ca_30953_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 5.5e-21 105.1 178 38.8
Medtr6g024185 Medicago truncatula HOM05D007995 ORTHO05D001819 7.2e-21 104.8 170 37.6
Lalb_Chr16g0386251 Lupinus albus HOM05D007995 ORTHO05D001819 2.1e-20 103.2 165 37.6
Phvul.007G271600 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 2.7e-20 102.8 172 36.6
Medtr5g095680 Medicago truncatula HOM05D007995 ORTHO05D001819 4.7e-20 102.1 182 37.4
Lalb_Chr14g0366261 Lupinus albus HOM05D007995 ORTHO05D001819 3.0e-19 99.4 171 37.4
Ca_26896_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 6.8e-19 98.2 157 39.5
Medtr6g024180 Medicago truncatula HOM05D007995 ORTHO05D001819 8.8e-19 97.8 174 37.4
Psat1g140040 Pisum sativum HOM05D007995 ORTHO05D001819 2.6e-18 96.3 167 35.9
arahy.Tifrunner.gnm1.ann1.8T8NTE Arachis hypogaea HOM05D007995 ORTHO05D001819 5.7e-18 95.1 186 34.4
Lalb_Chr16g0386281 Lupinus albus HOM05D007995 ORTHO05D001819 1.4e-16 90.5 114 43.0
Ca_28472_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 5.4e-16 88.6 79 55.7
Psat1g087920 Pisum sativum HOM05D007995 ORTHO05D001819 7.0e-16 88.2 178 35.4
Lalb_Chr14g0366251 Lupinus albus HOM05D007995 ORTHO05D001819 3.5e-15 85.9 168 32.1
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 1.3e-14 84.0 152 36.8
Medtr6g023895 Medicago truncatula HOM05D007995 ORTHO05D001819 6.5e-14 81.6 82 51.2
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.5e-14 81.3 168 32.1
Medtr6g024050 Medicago truncatula HOM05D007995 ORTHO05D001819 1.1e-13 80.9 175 32.6
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.1e-13 80.9 168 32.1
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 3.2e-13 79.3 168 31.5
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 4.2e-13 79.0 152 34.9
Medtr6g024060 Medicago truncatula HOM05D007995 ORTHO05D001819 5.5e-13 78.6 175 31.4
Medtr6g024075 Medicago truncatula HOM05D007995 ORTHO05D001819 5.5e-13 78.6 175 31.4
TPR.G22073 Trifolium pratense HOM05D007995 ORTHO05D001819 5.5e-13 78.6 176 34.1
Medtr6g024195 Medicago truncatula HOM05D007995 ORTHO05D001819 9.4e-13 77.8 171 33.3
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 9.4e-13 77.8 168 31.0
Medtr0155s0080 Medicago truncatula HOM05D007995 ORTHO05D001819 1.2e-12 77.4 179 35.2
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.7e-12 76.3 162 33.3
Aa31LG10G5720 Aethionema arabicum HOM05D008385 ORTHO05D001819 3.6e-12 75.9 163 34.4
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.1e-12 75.1 171 32.2
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 6.1e-12 75.1 168 30.4
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.0e-12 74.7 171 31.6
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 1.0e-11 74.3 167 29.3
MELO3C027398.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-11 73.9 171 32.2
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-11 73.6 170 31.2
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.3e-11 73.2 170 31.8
Medtr6g025520 Medicago truncatula HOM05D007995 ORTHO05D001819 2.3e-11 73.2 176 31.2
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.0e-11 72.8 169 31.4
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.0e-11 72.8 169 31.4
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 5.2e-11 72.0 151 30.5
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.8e-11 71.6 173 30.6
TPR.G18497 Trifolium pratense HOM05D007995 ORTHO05D001819 6.8e-11 71.6 114 36.8
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.8e-11 71.2 171 31.0
MELO3C027828.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.8e-11 71.2 162 31.5
Lalb_Chr14g0366241 Lupinus albus HOM05D007995 ORTHO05D001819 8.8e-11 71.2 92 47.8
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.5e-10 70.5 173 30.1
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.0e-10 70.1 171 31.0
Lj1g0000753 Lotus japonicus HOM05D003146 ORTHO05D001819 2.0e-10 70.1 175 33.1
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 4.4e-10 68.9 165 26.7
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.7e-10 68.6 148 32.4
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 9.8e-10 67.8 154 28.6
Carub.0001s3713 Capsella rubella HOM05D003146 ORTHO05D001819 1.3e-09 67.4 174 30.5
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.3e-09 67.4 145 33.1
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-09 67.4 161 31.7
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-09 67.0 148 33.1
Medtr0155s0060 Medicago truncatula HOM05D007995 ORTHO05D001819 1.7e-09 67.0 157 30.6
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 2.8e-09 66.2 174 29.3
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.7e-09 65.9 164 31.1
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.7e-09 65.9 164 31.1
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.7e-09 65.9 164 31.1
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.7e-09 65.9 164 31.1
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.7e-09 65.9 164 31.1
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 4.9e-09 65.5 174 25.9
Medtr6g024085 Medicago truncatula HOM05D007995 ORTHO05D001819 6.3e-09 65.1 175 31.4
Medtr4g031690 Medicago truncatula HOM05D007995 ORTHO05D001819 8.3e-09 64.7 105 36.2
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 1.1e-08 64.3 152 27.6
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 1.4e-08 63.9 162 30.2
ClCG07G004740 Citrullus lanatus HOM05D003146 ORTHO05D001819 3.1e-08 62.8 173 26.0
Medtr6g024170 Medicago truncatula HOM05D007995 ORTHO05D001819 3.1e-08 62.8 180 30.6
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 3.1e-08 62.8 173 28.9
arahy.Tifrunner.gnm1.ann1.I3WRP4 Arachis hypogaea HOM05D007995 ORTHO05D001819 5.4e-08 62.0 144 30.6
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 7.0e-08 61.6 172 26.7
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.2e-07 60.8 151 27.8
TWI59G0004 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 3.5e-07 59.3 172 25.6
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 5.9e-07 58.5 174 29.3
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 5.9e-07 58.5 174 29.3
THA.LOC104825839 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 7.7e-07 58.2 174 28.2
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 1.0e-06 57.8 178 27.5
Carub.0004s0393 Capsella rubella HOM05D008385 ORTHO05D010806 1.3e-06 57.4 141 33.3
CsaV3_6G020170 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-06 57.0 123 30.1
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.3e-06 56.6 86 34.9
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 2.9e-06 56.2 182 24.7
AT1G50340 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 3.8e-06 55.8 139 30.2
QL04p032132 Quercus lobata HOM05D003146 ORTHO05D001819 3.8e-06 55.8 178 27.0
QL04p033186 Quercus lobata HOM05D003146 ORTHO05D001819 3.8e-06 55.8 178 27.0
Prupe.3G007900 Prunus persica HOM05D001445 ORTHO05D001207 6.6e-06 55.1 177 27.1
THA.LOC104810183 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 6.6e-06 55.1 174 27.6
THA.LOC104810184 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 6.6e-06 55.1 174 27.6
Medtr6g025560 Medicago truncatula HOM05D007995 ORTHO05D001819 8.6e-06 54.7 177 29.4
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 8.6e-06 54.7 176 27.8


User provided reference genes

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