Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 4.1e-63 244.6 127 100.0
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 4.1e-63 244.6 127 100.0
Psat1g084080 Pisum sativum HOM05D005370 ORTHO05D006659 4.1e-63 244.6 127 100.0
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 1.1e-44 183.3 132 77.3
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 1.5e-41 172.9 124 75.0
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 9.9e-41 170.2 124 73.4
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 4.2e-39 164.9 124 71.8
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 9.3e-39 163.7 133 70.7
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 9.3e-31 137.1 124 61.3
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 3.0e-29 132.1 127 59.1
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 1.1e-28 130.2 125 59.2
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 1.5e-28 129.8 126 59.5
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 4.3e-28 128.3 126 61.1
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 9.6e-28 127.1 129 59.7
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 2.8e-27 125.6 133 57.9
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 7.6e-25 117.5 133 54.9
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.4e-23 113.2 125 52.8
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.2e-22 110.2 126 52.4
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 3.0e-21 105.5 127 48.0
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 1.9e-20 102.8 49 100.0
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 2.5e-20 102.4 140 45.7
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 2.5e-20 102.4 124 50.8
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 3.3e-20 102.1 131 45.0
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 4.3e-20 101.7 123 50.4
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 5.7e-20 101.3 124 46.8
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 5.7e-20 101.3 126 47.6
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 7.4e-20 100.9 136 45.6
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 9.7e-20 100.5 136 45.6
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 1.6e-19 99.8 127 47.2
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 1.6e-19 99.8 137 45.3
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 2.2e-19 99.4 124 44.4
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 2.2e-19 99.4 144 45.8
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 4.8e-19 98.2 125 44.8
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 4.8e-19 98.2 126 47.6
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 2.4e-18 95.9 125 48.0
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 2.4e-18 95.9 126 47.6
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 3.1e-18 95.5 130 46.9
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 4.1e-18 95.1 130 46.9
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 1.5e-17 93.2 125 44.8
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 1.5e-17 93.2 125 44.8
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 2.0e-17 92.8 134 42.5
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 3.4e-17 92.0 146 43.8
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 4.5e-17 91.7 125 44.8
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 5.9e-17 91.3 139 41.0
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 7.6e-17 90.9 146 40.4
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 7.6e-17 90.9 130 44.6
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 7.6e-17 90.9 123 47.2
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 2.2e-16 89.4 136 44.9
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 2.9e-16 89.0 131 42.7
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 2.9e-16 89.0 127 45.7
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 2.9e-16 89.0 146 39.7
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 5.0e-16 88.2 128 41.4
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 5.0e-16 88.2 138 43.5
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 8.5e-16 87.4 128 42.2
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.4e-15 86.7 123 45.5
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 1.4e-15 86.7 136 42.6
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 1.9e-15 86.3 129 42.6
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 1.9e-15 86.3 128 42.2
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 3.2e-15 85.5 128 41.4
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 4.2e-15 85.1 136 44.1
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 1.6e-14 83.2 126 41.3
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 1.6e-14 83.2 138 42.0
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 2.7e-14 82.4 128 40.6
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 3.6e-14 82.0 136 41.9
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 3.6e-14 82.0 126 42.9
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 6.1e-14 81.3 131 41.2
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 6.1e-14 81.3 128 43.8
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 7.9e-14 80.9 129 41.9
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.0e-13 80.5 127 39.4
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 1.4e-13 80.1 126 41.3
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 1.4e-13 80.1 126 42.1
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 3.0e-13 79.0 146 36.3
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 3.0e-13 79.0 130 43.1
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 5.1e-13 78.2 127 38.6
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 5.1e-13 78.2 135 37.8
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 6.7e-13 77.8 127 40.9
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 5.7e-12 74.7 147 38.8
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 5.7e-12 74.7 124 38.7
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 9.7e-12 73.9 156 34.6
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 1.3e-11 73.6 151 41.1
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 1.3e-11 73.6 150 36.7
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 6.3e-11 71.2 135 34.1
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 8.2e-11 70.9 137 37.2
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 8.2e-11 70.9 135 36.3
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 4.1e-10 68.6 125 36.0
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.1e-10 68.6 122 41.0
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 6.9e-10 67.8 145 40.0
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 9.1e-10 67.4 156 34.0
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 1.5e-09 66.6 150 32.7
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 2.6e-09 65.9 153 35.3
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 1.0e-08 63.9 147 34.7
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 2.2e-08 62.8 85 42.4
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.0e-08 61.6 117 39.3
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 8.5e-08 60.8 121 38.0
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 2.5e-07 59.3 101 40.6
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.5e-07 58.2 117 38.5
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 7.2e-07 57.8 123 33.3
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 2.1e-06 56.2 119 34.5
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 4.7e-06 55.1 124 31.5


User provided reference genes

Program Settings