Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g072720 Pisum sativum HOM05D003697 ORTHO05D005452 2.0e-45 185.3 87 100.0
Psat3g096360 Pisum sativum HOM05D003697 ORTHO05D323777 2.0e-45 185.3 87 100.0
Psat6g235600 Pisum sativum HOM05D012210 ORTHO05D005452 1.5e-24 115.9 54 92.6
Psat0s4378g0040 Pisum sativum HOM05D012210 ORTHO05D005452 1.2e-21 106.3 84 61.9
Psat1g073840 Pisum sativum HOM05D012210 ORTHO05D005452 1.2e-21 106.3 84 61.9
Psat6g132920 Pisum sativum HOM05D003697 ORTHO05D005452 6.0e-13 77.4 54 64.8
MSTRG.20304 Avicennia marina HOM05D003697 ORTHO05D005452 1.1e-09 66.6 31 90.3
Migut.B00820 Erythranthe guttata HOM05D003697 ORTHO05D005452 1.1e-09 66.6 31 90.3
SalBow7G4621 Salvia bowleyana HOM05D003697 ORTHO05D005452 1.1e-09 66.6 31 90.3
Atru.chr3.1599 Acer truncatum HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Atru.chr3.1607 Acer truncatum HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Atru.chr6.584 Acer truncatum HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Actinidia06460 Actinidia chinensis HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Actinidia26154 Actinidia chinensis HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Ah.04g162670 Amaranthus hybridus HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
ATR1136G197 Amborella trichopoda HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Cfa005504 Carpinus fangiana HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
CiPaw.06G146300 Carya illinoinensis HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Ciclev10000024m.g Citrus clementina HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
COL.COLO4_11778 Corchorus olitorius HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Haze_01738 Corylus avellana HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Duzib132G0461 Durio zibethinus HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Duzib248G1637 Durio zibethinus HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
FvH4_5g28990 Fragaria vesca HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
FAN04G3000 Fragaria x ananassa HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
FAN08G0197 Fragaria x ananassa HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
FAN13G2190 Fragaria x ananassa HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
FAN18G2119 Fragaria x ananassa HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Gohir.A04G121300 Gossypium hirsutum HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Lj5C253T9 Lonicera japonica HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
MD15G1427500 Malus domestica HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Nn1g08409 Nelumbo nucifera HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Prupe.1G572000 Prunus persica HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
QL02p099301 Quercus lobata HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Rhsim05G0119800 Rhododendron simsii HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
RcHm_v2.0_Chr7g0221551 Rosa chinensis HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
SMO276G0030 Selaginella moellendorffii HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
TWI14G0038 Tripterygium wilfordii HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
TAR381G0967 Trochodendron aralioides HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
vmacro19883 Vaccinium macrocarpon HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
GSVIVG01022867001 Vitis vinifera HOM05D003697 ORTHO05D005452 1.8e-09 65.9 31 87.1
Eucgr.H01580 Eucalyptus grandis HOM05D003697 ORTHO05D005452 3.1e-09 65.1 31 87.1
Eucgr.I02739 Eucalyptus grandis HOM05D003697 ORTHO05D005452 3.1e-09 65.1 31 87.1
Psat1g220480 Pisum sativum HOM05D003697 ORTHO05D005452 3.1e-09 65.1 31 87.1
Psat7g240960 Pisum sativum HOM05D003697 ORTHO05D005452 3.1e-09 65.1 31 87.1
PGR142G1992 Punica granatum HOM05D003697 ORTHO05D005452 3.1e-09 65.1 31 87.1
EL10Ac4g08781 Beta vulgaris HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
CSS0042528 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
CANSAT11G1101 Cannabis sativa HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
AUR62037329 Chenopodium quinoa HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
AUR62042597 Chenopodium quinoa HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
ClCG05G009590 Citrullus lanatus HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
MELO3C019456.2 Cucumis melo HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
CsaV3_3G019150 Cucumis sativus L. HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
Dinv24296 Davidia involucrata HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
Gohir.D04G163800 Gossypium hirsutum HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
Gorai.012G151700 Gossypium raimondii HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
Hma1.2p1_0217F.1_g092200 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
Hma1.2p1_0217F.1_g092210 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
MD08G1235900 Malus domestica HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
Manes.10G121900 Manihot esculenta HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
Potri.003G018900 Populus trichocarpa HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
Sabra03G0010400 Salix brachista HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
Sed0005890 Sechium edule HOM05D003697 ORTHO05D005452 4.0e-09 64.7 31 83.9
Aqoxy5G02635 Aquilegia oxysepala HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
BcaB03g14879 Brassica carinata HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
A07p37570 Brassica napus HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
C06p45330 Brassica napus HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
BraA07t31318Z Brassica rapa HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
Thhalv10018004m.g Eutrema salsugineum HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
Gohir.A12G027900 Gossypium hirsutum HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
Gohir.D12G027400 Gossypium hirsutum HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
Gorai.008G027900 Gossypium raimondii HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
Sp5g26380 Schrenkiella parvula HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
SEGI_03237 Sequoiadendron giganteum HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
Sc02g0002740 Simmondsia chinensis HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
Thecc.02G088500 Theobroma cacao HOM05D003697 ORTHO05D005452 5.3e-09 64.3 31 83.9
CAN.G798.13 Capsicum annuum HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 83.9
Ca_00071_v3 Cicer arietinum L. HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 83.9
Lj6g0024422 Lotus japonicus HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 83.9
Lalb_Chr13g0295701 Lupinus albus HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 83.9
Medtr2g006960 Medicago truncatula HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 83.9
Nitab4.5_0000816g0140 Nicotiana tabacum HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 83.9
Nitab4.5_0008466g0010 Nicotiana tabacum HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 83.9
Oeu027795.2 Olea europaea HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 83.9
Peaxi162Scf00011g00526 Petunia axillaris HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 83.9
Solyc01g104040.4 Solanum lycopersicum HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 83.9
Sopen01g046450 Solanum pennellii HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 83.9
HPP92_015204 Vanilla planifolia HOM05D003697 ORTHO05D005452 6.9e-09 63.9 31 87.1
Eucgr.H01552 Eucalyptus grandis HOM05D003697 ORTHO05D005452 9.0e-09 63.5 31 83.9
Lsat_1_v5_gn_9_118481 Lactuca sativa HOM05D003697 ORTHO05D005452 9.0e-09 63.5 31 83.9
AL2G30830 Arabidopsis lyrata HOM05D003697 ORTHO05D005452 1.2e-08 63.2 31 80.6
AT1G71220 Arabidopsis thaliana HOM05D003697 ORTHO05D005452 1.2e-08 63.2 31 80.6
Carub.0002s1810 Capsella rubella HOM05D003697 ORTHO05D005452 1.2e-08 63.2 31 80.6
CARHR064520 Cardamine hirsuta HOM05D003697 ORTHO05D005452 1.2e-08 63.2 31 80.6
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 1.2e-08 63.2 31 80.6
Cc02_g22700 Coffea canephora HOM05D003697 ORTHO05D005452 1.2e-08 63.2 31 83.9
Mapoly0156s0022 Marchantia polymorpha HOM05D003697 ORTHO05D005452 1.2e-08 63.2 31 80.6
Os02g0664200 Oryza sativa ssp. japonica HOM05D003697 ORTHO05D005452 1.2e-08 63.2 31 83.9
Phvul.006G215600 Phaseolus vulgaris HOM05D003697 ORTHO05D005452 1.2e-08 63.2 31 80.6
VMungo0540G0442 Vigna mungo HOM05D003697 ORTHO05D005452 1.2e-08 63.2 31 80.6
Zm00001eb258320 Zea mays HOM05D003697 ORTHO05D005452 1.2e-08 63.2 31 83.9
CBR_g48619 Chara braunii HOM05D003697 ORTHO05D005452 1.5e-08 62.8 31 80.6
Psat5g210280 Pisum sativum HOM05D003697 ORTHO05D005452 1.5e-08 62.8 31 83.9
BcaC08g46557 Brassica carinata HOM05D003697 ORTHO05D005452 2.0e-08 62.4 31 80.6
BolC6t39589H Brassica oleracea HOM05D003697 ORTHO05D005452 2.0e-08 62.4 31 80.6
DCAR_006698 Daucus carota HOM05D003697 ORTHO05D005452 2.0e-08 62.4 31 80.6
arahy.Tifrunner.gnm1.ann1.6LDV6M Arachis hypogaea HOM05D003697 ORTHO05D005452 2.6e-08 62.0 31 80.6
arahy.Tifrunner.gnm1.ann1.IR21Q7 Arachis hypogaea HOM05D003697 ORTHO05D005452 2.6e-08 62.0 31 80.6
ECA240G1790 Erigeron canadensis HOM05D003697 ORTHO05D005452 2.6e-08 62.0 31 80.6
Glyma.08G187500 Glycine max HOM05D003697 ORTHO05D005452 2.6e-08 62.0 31 77.4
HanXRQChr09g0249001 Helianthus annuus HOM05D003697 ORTHO05D005452 2.6e-08 62.0 31 80.6
SGA_v2.0_scaffold110G31335 Striga asiatica HOM05D003697 ORTHO05D005452 2.6e-08 62.0 31 83.9
TPR.G2085 Trifolium pratense HOM05D003697 ORTHO05D005452 2.6e-08 62.0 31 80.6
Psat3g186600 Pisum sativum HOM05D003697 ORTHO05D005452 3.4e-08 61.6 31 80.6
Psat5g210320 Pisum sativum HOM05D003697 ORTHO05D005452 3.4e-08 61.6 31 83.9
Aa31LG4G9290 Aethionema arabicum HOM05D003697 ORTHO05D005452 4.4e-08 61.2 31 80.6
PSO170G2453 Papaver somniferum HOM05D003697 ORTHO05D005452 4.4e-08 61.2 31 77.4
THA.LOC104801984 Tarenaya hassleriana HOM05D003697 ORTHO05D005452 5.8e-08 60.8 31 77.4
PSO017G4515 Papaver somniferum HOM05D003697 ORTHO05D005452 1.3e-07 59.7 31 74.2
Glyma.05G168600 Glycine max HOM05D003697 ORTHO05D005452 1.7e-07 59.3 31 74.2
Glyma.08G127200 Glycine max HOM05D003697 ORTHO05D005452 1.7e-07 59.3 31 74.2
AagrBONN_evm.TU.Sc2ySwM_362.2359 Anthoceros agrestis HOM05D003697 ORTHO05D005452 2.2e-07 58.9 31 77.4
ECA233G0288 Erigeron canadensis HOM05D003697 ORTHO05D005452 4.9e-07 57.8 27 85.2
Pp3c3_14060 Physcomitrium patens HOM05D003697 ORTHO05D005452 8.4e-07 57.0 31 71.0


User provided reference genes

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