Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 1.5e-228 795.8 400 100.0
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 3.1e-189 665.2 406 83.3
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 1.4e-170 603.2 403 77.2
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 9.4e-170 600.5 403 75.9
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 9.4e-170 600.5 400 77.2
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 1.4e-168 596.7 403 74.9
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 2.0e-167 592.8 402 75.6
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 4.3e-167 591.7 402 75.9
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 5.9e-164 581.3 405 73.3
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 2.9e-163 578.9 405 72.8
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 3.7e-150 535.4 408 68.6
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 4.8e-150 535.0 417 67.4
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 1.8e-149 533.1 410 68.0
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 1.2e-148 530.4 398 67.8
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.6e-148 530.0 358 72.6
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 3.5e-148 528.9 404 67.1
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 4.5e-148 528.5 396 67.9
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.7e-147 526.6 404 67.6
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 8.5e-147 524.2 378 67.7
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 7.2e-146 521.2 340 71.8
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 1.2e-145 520.4 409 65.5
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 1.2e-145 520.4 386 69.2
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 2.7e-145 519.2 383 68.4
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 3.0e-144 515.8 398 65.6
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 3.0e-144 515.8 403 65.5
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 6.8e-144 514.6 411 65.0
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 6.8e-144 514.6 411 65.0
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 3.4e-143 512.3 411 62.5
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.3e-142 510.4 341 71.0
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.7e-142 510.0 397 64.7
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 2.8e-142 509.2 383 67.1
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 4.8e-142 508.4 294 83.7
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 8.3e-142 507.7 407 63.1
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 8.3e-142 507.7 412 64.8
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 8.3e-142 507.7 411 65.2
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 2.4e-141 506.1 404 63.9
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 9.1e-141 504.2 409 62.8
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 9.1e-141 504.2 394 64.5
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 2.7e-140 502.7 411 64.2
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 2.7e-140 502.7 401 63.3
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 2.7e-140 502.7 405 64.2
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 3.5e-140 502.3 403 64.0
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 4.5e-140 501.9 344 70.1
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 4.5e-140 501.9 374 67.1
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 5.9e-140 501.5 341 69.2
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 1.0e-139 500.7 408 64.2
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 3.8e-139 498.8 403 63.5
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 5.0e-139 498.4 411 61.1
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 1.1e-138 497.3 368 66.0
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 1.1e-138 497.3 387 64.9
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 1.5e-138 496.9 379 65.4
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 3.2e-138 495.7 381 63.8
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 3.6e-137 492.3 350 66.3
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 3.6e-137 492.3 412 61.9
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 4.7e-137 491.9 383 64.0
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 6.1e-137 491.5 388 61.9
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 1.0e-136 490.7 377 66.0
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.4e-136 490.3 403 62.5
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 1.8e-136 490.0 370 65.4
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 1.8e-136 490.0 403 60.8
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 8.8e-136 487.6 387 63.0
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 8.8e-136 487.6 387 63.0
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 1.2e-135 487.3 410 61.0
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.5e-135 486.9 377 63.7
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 3.4e-135 485.7 383 62.7
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 3.4e-135 485.7 383 62.7
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 4.4e-135 485.3 370 65.4
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 9.8e-135 484.2 345 67.5
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 2.2e-134 483.0 318 71.4
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 2.2e-134 483.0 416 60.3
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 3.7e-134 482.3 394 61.4
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 3.7e-134 482.3 343 67.9
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 6.3e-134 481.5 429 58.7
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 1.8e-133 479.9 385 62.6
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 1.8e-133 479.9 367 65.4
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 5.4e-133 478.4 342 66.4
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 1.2e-132 477.2 309 73.1
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 1.6e-132 476.9 381 63.0
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 2.7e-132 476.1 400 60.0
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 4.5e-132 475.3 373 63.3
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 7.7e-132 474.6 400 60.0
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 1.3e-131 473.8 408 64.7
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 2.9e-131 472.6 345 68.1
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 6.6e-131 471.5 397 59.7
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 3.3e-130 469.2 407 58.2
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 3.3e-130 469.2 408 58.8
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 1.2e-129 467.2 343 66.8
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 2.8e-129 466.1 317 70.0
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 3.6e-129 465.7 318 67.9
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 4.0e-128 462.2 386 60.9
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 9.2e-125 451.1 375 61.6
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 8.6e-123 444.5 379 60.7
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 2.3e-120 436.4 363 60.1
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 9.8e-119 431.0 375 60.5
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 7.8e-116 421.4 319 65.2
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 1.5e-111 407.1 369 56.1
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 4.7e-105 385.6 256 70.7
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 6.8e-104 381.7 248 72.6
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 2.1e-100 370.2 271 66.1
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 3.9e-99 365.9 377 50.9
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 6.2e-97 358.6 303 63.0
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 4.0e-96 355.9 358 56.4
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 2.9e-94 349.7 269 64.3
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 5.3e-88 328.9 278 61.9
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 5.1e-83 312.4 372 42.5
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 3.3e-82 309.7 249 62.2
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 2.6e-79 300.1 338 43.5
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 1.0e-67 261.5 341 38.4
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.9e-61 240.7 181 60.8
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 5.5e-45 186.0 124 68.5
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 7.7e-39 165.6 407 33.9
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 5.5e-37 159.5 186 46.2
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 9.7e-34 148.7 97 74.2
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.3e-33 148.3 159 49.1
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 3.7e-33 146.7 150 51.3
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.4e-32 144.8 91 69.2
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 7.5e-18 95.9 85 58.8
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.3e-14 84.3 53 62.3
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 1.5e-13 81.6 93 48.4


User provided reference genes

Program Settings