Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 9.9e-33 142.9 74 100.0
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 4.3e-28 127.5 73 89.0
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 1.6e-27 125.6 69 91.3
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 2.0e-25 118.6 73 79.5
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 4.4e-25 117.5 73 78.1
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 2.2e-24 115.2 69 81.2
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 2.9e-24 114.8 73 76.7
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 4.9e-24 114.0 71 78.9
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 4.9e-24 114.0 71 78.9
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 1.6e-22 109.0 69 78.3
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 2.1e-22 108.6 73 72.6
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 2.1e-22 108.6 69 78.3
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 1.1e-20 102.8 67 73.1
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 1.9e-20 102.1 73 68.5
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 4.3e-20 100.9 67 73.1
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 4.3e-20 100.9 67 73.1
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 9.6e-20 99.8 67 73.1
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 9.6e-20 99.8 69 72.5
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 1.3e-19 99.4 73 67.1
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 1.3e-19 99.4 69 71.0
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.6e-19 99.0 67 71.6
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.1e-19 98.6 67 71.6
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 2.8e-19 98.2 72 66.7
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 2.8e-19 98.2 69 69.6
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 2.8e-19 98.2 68 73.5
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 4.8e-19 97.4 72 65.3
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 8.1e-19 96.7 68 63.2
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 8.1e-19 96.7 69 71.0
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.4e-18 95.9 67 70.1
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 1.8e-18 95.5 66 72.7
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 1.8e-18 95.5 67 67.2
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 2.4e-18 95.1 63 71.4
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 2.4e-18 95.1 67 67.2
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 3.1e-18 94.7 68 61.8
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 3.1e-18 94.7 68 61.8
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 3.1e-18 94.7 68 66.2
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 3.1e-18 94.7 66 71.2
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 3.1e-18 94.7 67 65.7
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 4.0e-18 94.4 67 67.2
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 4.0e-18 94.4 67 68.7
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 4.0e-18 94.4 67 68.7
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 4.0e-18 94.4 67 68.7
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 4.0e-18 94.4 67 68.7
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 5.3e-18 94.0 72 63.9
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 6.9e-18 93.6 69 62.3
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 6.9e-18 93.6 67 67.2
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 6.9e-18 93.6 66 68.2
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 6.9e-18 93.6 69 63.8
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 6.9e-18 93.6 67 67.2
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 6.9e-18 93.6 67 65.7
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 9.0e-18 93.2 67 65.7
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 9.0e-18 93.2 66 66.7
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 1.2e-17 92.8 67 67.2
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 1.5e-17 92.4 67 62.7
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 1.5e-17 92.4 67 65.7
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.5e-17 92.4 68 64.7
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 2.0e-17 92.0 67 65.7
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 2.0e-17 92.0 67 65.7
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 2.0e-17 92.0 67 65.7
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 2.0e-17 92.0 67 62.7
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 2.0e-17 92.0 66 65.2
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 2.6e-17 91.7 67 62.7
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 2.6e-17 91.7 67 62.7
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 2.6e-17 91.7 68 63.2
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 3.4e-17 91.3 69 62.3
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 4.5e-17 90.9 71 62.0
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 5.8e-17 90.5 66 63.6
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 5.8e-17 90.5 67 61.2
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 5.8e-17 90.5 67 61.2
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 5.8e-17 90.5 67 61.2
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 5.8e-17 90.5 68 57.4
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 5.8e-17 90.5 66 66.7
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 5.8e-17 90.5 72 61.1
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 5.8e-17 90.5 67 65.7
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 1.7e-16 89.0 72 61.1
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 1.7e-16 89.0 66 66.7
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 1.7e-16 89.0 66 60.6
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 2.2e-16 88.6 66 65.2
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 2.2e-16 88.6 66 65.2
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 2.2e-16 88.6 72 59.7
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 2.2e-16 88.6 73 57.5
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 2.9e-16 88.2 64 67.2
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 4.9e-16 87.4 66 62.1
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 6.4e-16 87.0 68 60.3
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 8.4e-16 86.7 65 64.6
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 1.1e-15 86.3 72 59.7
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.1e-15 86.3 72 58.3
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 1.1e-15 86.3 67 62.7
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.4e-15 85.9 67 61.2
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 1.9e-15 85.5 64 60.9
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 1.9e-15 85.5 68 58.8
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 2.4e-15 85.1 66 60.6
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 4.2e-15 84.3 67 55.2
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 4.2e-15 84.3 66 63.6
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 7.1e-15 83.6 67 65.7
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 1.6e-14 82.4 64 64.1
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 7.9e-14 80.1 63 60.3
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 9.6e-12 73.2 65 52.3
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 1.6e-11 72.4 63 52.4
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 2.1e-11 72.0 64 53.1
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 6.2e-11 70.5 59 57.6
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 1.8e-10 68.9 77 48.1
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 6.5e-08 60.5 63 47.6
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 4.2e-07 57.8 68 48.5
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 2.1e-06 55.5 37 75.7


User provided reference genes

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