Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g065600 Pisum sativum HOM05D012325 ORTHO05D013858 2.7e-79 298.5 144 100.0
Psat5g290480 Pisum sativum HOM05D012325 ORTHO05D013858 6.7e-78 293.9 143 98.6
Psat0s1031g0040 Pisum sativum HOM05D012325 ORTHO05D013858 4.5e-74 281.2 143 95.8
Psat4g034920 Pisum sativum HOM05D012325 ORTHO05D013858 1.8e-67 259.2 230 62.2
Psat3g016760 Pisum sativum HOM05D012325 ORTHO05D013858 3.5e-58 228.4 120 93.3
TPR.G103 Trifolium pratense HOM05D012325 ORTHO05D013858 4.9e-52 208.0 145 69.0
Medtr1g043700 Medicago truncatula HOM05D012325 ORTHO05D013858 1.1e-24 117.1 126 49.2
Psat6g063720 Pisum sativum HOM05D012325 ORTHO05D013858 4.0e-22 108.6 50 96.0
Medtr1g054555 Medicago truncatula HOM05D012325 ORTHO05D013858 1.5e-21 106.7 136 46.3
COL.COLO4_19395 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.4e-19 98.2 133 40.6
ECA240G2607 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-18 95.9 84 47.6
COL.COLO4_08404 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.0e-17 94.0 139 35.3
COL.COLO4_12903 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.0e-17 94.0 138 37.0
Psat6g169440 Pisum sativum HOM05D012325 ORTHO05D013858 2.3e-17 92.8 122 40.2
Psat6g169480 Pisum sativum HOM05D028757 ORTHO05D000002 2.3e-17 92.8 122 40.2
COL.COLO4_20628 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.5e-16 90.1 73 56.2
ECA234G2434 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-16 90.1 130 39.2
ECA232G0982 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-16 89.0 161 34.8
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.3e-16 87.8 80 46.2
ECA246G1501 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.3e-16 87.8 69 49.3
COL.COLO4_20202 Corchorus olitorius HOM05D000004 ORTHO05D000002 9.6e-16 87.4 78 47.4
COL.COLO4_28963 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.8e-15 85.9 138 36.2
ECA247G3996 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.8e-15 85.1 86 45.3
COL.COLO4_05398 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.1e-14 84.0 73 52.1
ECA236G3521 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.4e-14 82.8 83 47.0
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.4e-14 82.8 83 47.0
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 6.9e-14 81.3 174 32.8
Lalb_Chr06g0168691 Lupinus albus HOM05D000004 ORTHO05D000002 6.9e-14 81.3 145 31.0
Psat2g165880 Pisum sativum HOM05D000004 ORTHO05D000002 6.9e-14 81.3 131 32.8
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.0e-14 80.9 73 46.6
COL.COLO4_04208 Corchorus olitorius HOM05D037185 ORTHO05D000002 2.6e-13 79.3 177 31.1
COL.COLO4_22673 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.6e-13 79.3 130 33.8
Psat1g072000 Pisum sativum HOM05D000004 ORTHO05D000002 4.5e-13 78.6 131 32.8
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 4.5e-13 78.6 131 32.8
Psat3g181800 Pisum sativum HOM05D000004 ORTHO05D000002 4.5e-13 78.6 131 32.8
COL.COLO4_06470 Corchorus olitorius HOM05D000004 ORTHO05D000002 9.9e-13 77.4 72 47.2
Psat2g059760 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-12 77.0 86 39.5
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-12 76.6 73 46.6
TPR.G11444 Trifolium pratense HOM05D000004 ORTHO05D000002 1.7e-12 76.6 68 50.0
Psat3g025360 Pisum sativum HOM05D000004 ORTHO05D000002 6.4e-12 74.7 88 36.4
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 6.4e-12 74.7 64 43.8
Psat5g099160 Pisum sativum HOM05D000004 ORTHO05D000002 6.4e-12 74.7 88 37.5
Psat7g017240 Pisum sativum HOM05D000004 ORTHO05D000002 6.4e-12 74.7 88 36.4
Psat2g029440 Pisum sativum HOM05D000004 ORTHO05D000002 8.4e-12 74.3 83 42.2
Psat4g134960 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-11 73.9 64 43.8
Psat5g213880 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-11 73.6 105 35.2
COL.COLO4_19237 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.9e-11 73.2 73 50.7
Psat1g201560 Pisum sativum HOM05D000004 ORTHO05D000002 1.9e-11 73.2 101 36.6
Psat5g253800 Pisum sativum HOM05D000004 ORTHO05D000002 1.9e-11 73.2 74 45.9
Psat6g093200 Pisum sativum HOM05D000004 ORTHO05D000002 4.2e-11 72.0 69 44.9
ECA246G3805 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.1e-11 71.2 72 44.4
Psat0s1551g0120 Pisum sativum HOM05D000004 ORTHO05D000002 7.1e-11 71.2 83 39.8
Psat2g127640 Pisum sativum HOM05D000004 ORTHO05D000002 7.1e-11 71.2 130 30.8
Psat3g197960 Pisum sativum HOM05D000004 ORTHO05D000002 7.1e-11 71.2 83 39.8
Psat0s3835g0040 Pisum sativum HOM05D000004 ORTHO05D000002 1.2e-10 70.5 69 43.5
Psat0s3433g0040 Pisum sativum HOM05D000004 ORTHO05D000002 2.1e-10 69.7 143 30.8
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 4.6e-10 68.6 69 40.6
Sopen04g007300 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-09 67.4 76 39.5
Psat2g056800 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-09 67.0 91 36.3
TPR.G6317 Trifolium pratense HOM05D000004 ORTHO05D000002 1.8e-09 66.6 133 30.8
TPR.G7895 Trifolium pratense HOM05D000004 ORTHO05D000048 2.3e-09 66.2 93 36.6
CANSAT54G0535 Cannabis sativa HOM05D000004 ORTHO05D000002 5.1e-09 65.1 108 31.5
ECA232G0168 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.1e-09 65.1 145 33.8
Nn5g31040 Nelumbo nucifera HOM05D000004 ORTHO05D000002 5.1e-09 65.1 140 24.3
Nn1g00297 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.7e-09 64.3 93 34.4
Psat1g012480 Pisum sativum HOM05D000004 ORTHO05D000002 8.7e-09 64.3 122 30.3
Psat4g198400 Pisum sativum HOM05D000004 ORTHO05D000002 8.7e-09 64.3 80 33.8
PGSC0003DMG401028522 Solanum tuberosum HOM05D010154 ORTHO05D010293 8.7e-09 64.3 75 40.0
Hma1.2p1_0812F.1_g222280 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.5e-08 63.5 89 34.8
CANSAT35G0278 Cannabis sativa HOM05D000004 ORTHO05D000002 3.3e-08 62.4 75 38.7
COL.COLO4_38135 Corchorus olitorius HOM05D014085 ORTHO05D013858 3.3e-08 62.4 122 29.5
Psat1g111280 Pisum sativum HOM05D000004 ORTHO05D000002 4.3e-08 62.0 121 30.6
Sopen10g028470 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-08 62.0 76 36.8
CANSAT35G1793 Cannabis sativa HOM05D000004 ORTHO05D000002 5.6e-08 61.6 74 37.8
Nn5g27771 Nelumbo nucifera HOM05D000004 ORTHO05D000002 5.6e-08 61.6 75 36.0
TWI34G0287 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.6e-08 61.6 64 40.6
TWI38G0029 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.6e-08 61.6 64 40.6
TWI81G0785 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.6e-08 61.6 64 40.6
Nn6g31876 Nelumbo nucifera HOM05D000004 ORTHO05D000002 7.4e-08 61.2 64 42.2
Psat5g269080 Pisum sativum HOM05D004655 ORTHO05D005567 7.4e-08 61.2 91 34.1
TPR.G6049 Trifolium pratense HOM05D012325 ORTHO05D013858 7.4e-08 61.2 60 41.7
TWI31G1488 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.4e-08 61.2 106 34.0
Atru.chr6.164 Acer truncatum HOM05D000544 ORTHO05D000002 1.3e-07 60.5 99 29.3
VMungo1127G2005 Vigna mungo HOM05D000390 ORTHO05D000002 2.1e-07 59.7 49 53.1
Nn4g24324 Nelumbo nucifera HOM05D012325 ORTHO05D000002 2.8e-07 59.3 82 37.8
Psat5g267400 Pisum sativum HOM05D000004 ORTHO05D000002 2.8e-07 59.3 73 37.0
TWI39G0003 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.8e-07 59.3 64 39.1
COL.COLO4_21378 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.8e-07 58.5 60 43.3
PSO675G1874 Papaver somniferum HOM05D000004 ORTHO05D000002 4.8e-07 58.5 86 32.6
PSO832G0807 Papaver somniferum HOM05D000004 ORTHO05D000002 4.8e-07 58.5 101 31.7
QL02p059512 Quercus lobata HOM05D000004 ORTHO05D000002 4.8e-07 58.5 130 26.9
TWI09G0741 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.8e-07 58.5 70 38.6
Atru.chr1.2388 Acer truncatum HOM05D000004 ORTHO05D000002 8.1e-07 57.8 63 41.3
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 8.1e-07 57.8 110 30.9
PSO675G7897 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.4 82 32.9
QL01p053992 Quercus lobata HOM05D000004 ORTHO05D000002 1.1e-06 57.4 73 35.6
QL04p085052 Quercus lobata HOM05D000004 ORTHO05D000002 1.1e-06 57.4 73 35.6
QL08p043961 Quercus lobata HOM05D000004 ORTHO05D000002 1.1e-06 57.4 73 35.6
COL.COLO4_10638 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.4e-06 57.0 78 41.0
CAN.G1046.12 Capsicum annuum HOM05D012202 ORTHO05D017741 1.8e-06 56.6 67 37.3
TWI09G0429 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.8e-06 56.6 69 33.3
TAR643G0001 Trochodendron aralioides HOM05D000004 ORTHO05D000002 1.8e-06 56.6 71 33.8
SHI15690 Sapria himalayana HOM05D000004 ORTHO05D000002 2.4e-06 56.2 78 33.3
RcHm_v2.0_Chr6g0250891 Rosa chinensis HOM05D000004 ORTHO05D000002 4.0e-06 55.5 76 34.2
PGSC0003DMG402010614 Solanum tuberosum HOM05D031107 ORTHO05D010293 4.0e-06 55.5 68 33.8
RcHm_v2.0_Chr2g0174581 Rosa chinensis HOM05D000004 ORTHO05D000002 5.3e-06 55.1 118 29.7
Peaxi162Scf00185g00113 Petunia axillaris HOM05D025730 ORTHO05D000695 6.9e-06 54.7 62 40.3
COL.COLO4_03842 Corchorus olitorius HOM05D012325 ORTHO05D013858 9.0e-06 54.3 52 46.2
HanXRQChr04g0101171 Helianthus annuus HOM05D000004 ORTHO05D000002 9.0e-06 54.3 151 29.1
PGSC0003DMG400019194 Solanum tuberosum HOM05D014085 ORTHO05D010293 9.0e-06 54.3 68 35.3


User provided reference genes

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