Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g058360 Pisum sativum HOM05D005182 ORTHO05D006631 2.8e-91 338.6 169 100.0
Psat1g058400 Pisum sativum HOM05D005182 ORTHO05D006631 2.0e-60 236.1 186 65.1
TPR.G14069 Trifolium pratense HOM05D005182 ORTHO05D006631 6.5e-56 221.1 148 70.9
Medtr6g005410 Medicago truncatula HOM05D005182 ORTHO05D006631 1.6e-54 216.5 149 68.5
Medtr6g005390 Medicago truncatula HOM05D005182 ORTHO05D006631 1.4e-53 213.4 148 67.6
Psat1g190920 Pisum sativum HOM05D005182 ORTHO05D006631 1.8e-53 213.0 148 68.2
Ca_04172_v3 Cicer arietinum L. HOM05D005182 ORTHO05D006631 2.0e-52 209.5 167 64.7
Lj2g0004707 Lotus japonicus HOM05D005182 ORTHO05D006631 1.8e-50 203.0 148 64.9
Glyma.05G004900 Glycine max HOM05D005182 ORTHO05D006631 2.4e-50 202.6 148 62.8
Phvul.004G010800 Phaseolus vulgaris HOM05D005182 ORTHO05D006631 2.4e-50 202.6 148 63.5
VMungo0464G0237 Vigna mungo HOM05D005182 ORTHO05D006631 2.4e-50 202.6 148 63.5
DCAR_011246 Daucus carota HOM05D005182 ORTHO05D006631 3.8e-48 195.3 146 63.7
Nitab4.5_0005432g0010 Nicotiana tabacum HOM05D005182 ORTHO05D006631 1.1e-47 193.7 145 62.8
PGSC0003DMG400000477 Solanum tuberosum HOM05D005182 ORTHO05D006631 1.5e-47 193.4 141 63.8
Sabra01G0148000 Salix brachista HOM05D005182 ORTHO05D006631 1.9e-47 193.0 144 63.9
Dinv35097 Davidia involucrata HOM05D005182 ORTHO05D006631 3.2e-47 192.2 144 63.2
Nn3g16771 Nelumbo nucifera HOM05D005182 ORTHO05D006631 3.2e-47 192.2 150 58.7
Nitab4.5_0002682g0020 Nicotiana tabacum HOM05D005182 ORTHO05D006631 3.2e-47 192.2 141 63.8
Peaxi162Scf00129g01422 Petunia axillaris HOM05D005182 ORTHO05D006631 4.2e-47 191.8 141 61.7
Solyc02g086560.3 Solanum lycopersicum HOM05D005182 ORTHO05D006631 7.2e-47 191.0 141 63.1
TAR629G2348 Trochodendron aralioides HOM05D005182 ORTHO05D006631 7.2e-47 191.0 144 62.5
MD09G1028700 Malus domestica HOM05D005182 ORTHO05D006631 9.4e-47 190.7 144 60.4
RcHm_v2.0_Chr2g0173081 Rosa chinensis HOM05D005182 ORTHO05D006631 9.4e-47 190.7 144 61.1
Sopen02g031300 Solanum pennellii HOM05D005182 ORTHO05D006631 9.4e-47 190.7 141 63.1
Actinidia06755 Actinidia chinensis HOM05D005182 ORTHO05D006631 1.2e-46 190.3 144 62.5
Manes.17G115200 Manihot esculenta HOM05D005182 ORTHO05D006631 1.2e-46 190.3 144 63.2
CAN.G1799.12 Capsicum annuum HOM05D005182 ORTHO05D006631 1.6e-46 189.9 141 61.7
Aqoxy3G02839 Aquilegia oxysepala HOM05D005182 ORTHO05D006631 2.1e-46 189.5 144 61.1
Potri.001G178800 Populus trichocarpa HOM05D005182 ORTHO05D006631 2.1e-46 189.5 144 61.8
SalBow1G7073 Salvia bowleyana HOM05D005182 ORTHO05D006631 4.7e-46 188.3 140 63.6
Cfa007391 Carpinus fangiana HOM05D005182 ORTHO05D006631 6.1e-46 188.0 144 61.1
MELO3C021568.2 Cucumis melo HOM05D005182 ORTHO05D006631 8.0e-46 187.6 148 59.5
Atru.chr6.2358 Acer truncatum HOM05D005182 ORTHO05D006631 1.0e-45 187.2 146 61.0
Peaxi162Scf00304g01217 Petunia axillaris HOM05D005182 ORTHO05D006631 1.0e-45 187.2 141 60.3
Prupe.3G289500 Prunus persica HOM05D005182 ORTHO05D006631 1.8e-45 186.4 144 59.7
CiPaw.02G035100 Carya illinoinensis HOM05D005182 ORTHO05D006631 2.3e-45 186.0 145 60.7
MBI16_g14596_MAGBIO Magnolia biondii HOM05D005182 ORTHO05D006631 2.3e-45 186.0 146 59.6
QL02p075210 Quercus lobata HOM05D005182 ORTHO05D006631 2.3e-45 186.0 144 61.1
CANSAT64G2419 Cannabis sativa HOM05D005182 ORTHO05D006631 3.0e-45 185.7 144 59.0
MD17G1030300 Malus domestica HOM05D005182 ORTHO05D006631 3.0e-45 185.7 149 59.1
Haze_14718 Corylus avellana HOM05D005182 ORTHO05D006631 5.2e-45 184.9 144 61.1
CsaV3_5G027220 Cucumis sativus L. HOM05D005182 ORTHO05D006631 5.2e-45 184.9 148 58.8
Thecc.04G015200 Theobroma cacao HOM05D005182 ORTHO05D006631 6.8e-45 184.5 144 59.0
AUR62024784 Chenopodium quinoa HOM05D005182 ORTHO05D006631 8.8e-45 184.1 148 56.8
AUR62032437 Chenopodium quinoa HOM05D005182 ORTHO05D006631 8.8e-45 184.1 148 56.8
Cc07_g01870 Coffea canephora HOM05D005182 ORTHO05D006631 8.8e-45 184.1 144 57.6
COL.COLO4_29086 Corchorus olitorius HOM05D005182 ORTHO05D006631 1.2e-44 183.7 144 59.0
TWI12G0687 Tripterygium wilfordii HOM05D005182 ORTHO05D006631 1.2e-44 183.7 144 58.3
Eucgr.J02232 Eucalyptus grandis HOM05D005182 ORTHO05D006631 1.5e-44 183.3 144 60.4
FAN21G0797 Fragaria x ananassa HOM05D005182 ORTHO05D006631 1.5e-44 183.3 144 58.3
ECA246G2600 Erigeron canadensis HOM05D005182 ORTHO05D006631 2.0e-44 183.0 140 61.4
PGR024G0002 Punica granatum HOM05D005182 ORTHO05D006631 2.0e-44 183.0 144 58.3
CARHR040200 Cardamine hirsuta HOM05D005182 ORTHO05D006631 2.6e-44 182.6 144 59.0
Ciclev10016757m.g Citrus clementina HOM05D005182 ORTHO05D006631 3.4e-44 182.2 148 58.8
FvH4_3g28470 Fragaria vesca HOM05D005182 ORTHO05D006631 3.4e-44 182.2 144 59.0
FAN11G2673 Fragaria x ananassa HOM05D005182 ORTHO05D006631 3.4e-44 182.2 144 59.0
SGA_v2.0_scaffold481G52321 Striga asiatica HOM05D005182 ORTHO05D006631 3.4e-44 182.2 141 57.4
Aa31LG10G4000 Aethionema arabicum HOM05D005182 ORTHO05D006631 5.7e-44 181.4 144 58.3
Migut.H00088 Erythranthe guttata HOM05D005182 ORTHO05D006631 7.5e-44 181.0 140 62.9
Gohir.A07G222400 Gossypium hirsutum HOM05D005182 ORTHO05D006631 7.5e-44 181.0 144 59.0
PGR142G3360 Punica granatum HOM05D005182 ORTHO05D006631 1.3e-43 180.3 144 58.3
Cpa.g.c28071.2 Carica papaya HOM05D005182 ORTHO05D006631 1.7e-43 179.9 140 60.0
AL1G57790 Arabidopsis lyrata HOM05D005182 ORTHO05D006631 2.2e-43 179.5 144 58.3
Carub.0001s3930 Capsella rubella HOM05D005182 ORTHO05D006631 2.2e-43 179.5 144 58.3
HanXRQChr17g0548351 Helianthus annuus HOM05D005182 ORTHO05D006631 2.2e-43 179.5 140 60.7
THA.LOC104801894 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 2.2e-43 179.5 149 55.7
THA.LOC104807109 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 2.2e-43 179.5 151 54.3
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 3.7e-43 178.7 136 62.5
Thhalv10011756m.g Eutrema salsugineum HOM05D005182 ORTHO05D006631 3.7e-43 178.7 144 58.3
vmacro04855 Vaccinium macrocarpon HOM05D005182 ORTHO05D006631 3.7e-43 178.7 147 60.5
Gohir.D07G229100 Gossypium hirsutum HOM05D005182 ORTHO05D006631 4.8e-43 178.3 144 57.6
Gorai.001G264200 Gossypium raimondii HOM05D005182 ORTHO05D006631 4.8e-43 178.3 144 57.6
A08p03300 Brassica napus HOM05D005182 ORTHO05D006631 1.1e-42 177.2 146 56.8
Cfa007386 Carpinus fangiana HOM05D005182 ORTHO05D006631 1.1e-42 177.2 135 62.2
AT1G50170 Arabidopsis thaliana HOM05D005182 ORTHO05D006631 2.4e-42 176.0 144 57.6
arahy.Tifrunner.gnm1.ann1.1JMX4I Arachis hypogaea HOM05D005182 ORTHO05D006631 3.1e-42 175.6 144 59.0
CDE06G0683 Ceratophyllum demersum HOM05D005182 ORTHO05D006631 3.1e-42 175.6 155 56.1
Sp1g37040 Schrenkiella parvula HOM05D005182 ORTHO05D006631 3.1e-42 175.6 144 56.9
Sed0010591 Sechium edule HOM05D005182 ORTHO05D006631 3.1e-42 175.6 148 56.1
Zm00001eb072570 Zea mays HOM05D005182 ORTHO05D006631 3.1e-42 175.6 144 54.9
C03p89510 Brassica napus HOM05D005182 ORTHO05D006631 1.2e-41 173.7 146 56.2
BolC3t21265H Brassica oleracea HOM05D005182 ORTHO05D006631 1.2e-41 173.7 146 56.2
BraA08t32363Z Brassica rapa HOM05D005182 ORTHO05D006631 1.2e-41 173.7 146 56.2
arahy.Tifrunner.gnm1.ann1.NIKC7C Arachis hypogaea HOM05D005182 ORTHO05D006631 2.0e-41 172.9 124 64.5
EL10Ac2g02464 Beta vulgaris HOM05D005182 ORTHO05D006631 3.5e-41 172.2 152 52.0
CiPaw.03G042000 Carya illinoinensis HOM05D005182 ORTHO05D006631 3.5e-41 172.2 145 60.7
ATR0661G518 Amborella trichopoda HOM05D005182 ORTHO05D006631 4.5e-41 171.8 138 54.3
GSVIVG01032428001 Vitis vinifera HOM05D005182 ORTHO05D006631 1.7e-40 169.9 123 64.2
Sed0025592 Sechium edule HOM05D005182 ORTHO05D006631 3.3e-39 165.6 146 56.2
Oeu057055.1 Olea europaea HOM05D005182 ORTHO05D006631 4.2e-39 165.2 123 60.2
Rhsim02G0095200 Rhododendron simsii HOM05D005182 ORTHO05D006631 4.2e-39 165.2 185 49.2
ClCG00G002150 Citrullus lanatus HOM05D005182 ORTHO05D006631 5.5e-39 164.9 148 56.1
ClCG09G019170 Citrullus lanatus HOM05D005182 ORTHO05D006631 5.5e-39 164.9 148 56.1
RcHm_v2.0_Chr7g0219921 Rosa chinensis HOM05D005182 ORTHO05D006631 9.5e-39 164.1 144 54.9
Hma1.2p1_1291F.1_g273570 Hydrangea macrophylla HOM05D005182 ORTHO05D006631 2.8e-38 162.5 123 60.2
Rhsim09G0149800 Rhododendron simsii HOM05D005182 ORTHO05D006631 4.7e-38 161.8 157 54.1
unitig_746.g26550 Utricularia gibba HOM05D005182 ORTHO05D006631 8.9e-37 157.5 123 59.3
SMO356G0462 Selaginella moellendorffii HOM05D005182 ORTHO05D006631 2.8e-35 152.5 141 45.4
SHI25748 Sapria himalayana HOM05D005182 ORTHO05D006631 4.9e-35 151.8 146 52.7
MSTRG.3153 Avicennia marina HOM05D005182 ORTHO05D006631 9.2e-34 147.5 112 62.5
Pp3c3_11190 Physcomitrium patens HOM05D005182 ORTHO05D006631 2.7e-33 146.0 150 44.7
arahy.Tifrunner.gnm1.ann1.0YQ56L Arachis hypogaea HOM05D005182 ORTHO05D006631 3.5e-33 145.6 152 48.7
CSS0002021 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 1.0e-32 144.1 112 60.7
Dinv33456 Davidia involucrata HOM05D005182 ORTHO05D006631 3.9e-32 142.1 118 59.3
RcHm_v2.0_Chr1g0351301 Rosa chinensis HOM05D005182 ORTHO05D006631 3.9e-32 142.1 140 52.1
CBR_g4824 Chara braunii HOM05D005182 ORTHO05D006631 1.6e-30 136.7 140 46.4
SEGI_02514 Sequoiadendron giganteum HOM05D005182 ORTHO05D006631 2.1e-30 136.3 113 58.4
FvH4_6g51400 Fragaria vesca HOM05D005182 ORTHO05D006631 8.0e-30 134.4 122 50.8
FAN14G1378 Fragaria x ananassa HOM05D005182 ORTHO05D006631 8.0e-30 134.4 122 50.8
Cpa.g.sc130.27 Carica papaya HOM05D005182 ORTHO05D006631 1.0e-29 134.0 108 60.2
MCO08G118 Micromonas commoda HOM05D005182 ORTHO05D006631 5.2e-29 131.7 132 46.2
Hund03875 Selenicereus undatus HOM05D005182 ORTHO05D006631 6.8e-29 131.3 114 54.4
Mapoly0034s0026 Marchantia polymorpha HOM05D005182 ORTHO05D006631 1.2e-28 130.6 114 51.8
Cpa.g.sc130.26 Carica papaya HOM05D005182 ORTHO05D006631 4.4e-28 128.6 106 59.4
Os02g0296800 Oryza sativa ssp. japonica HOM05D005182 ORTHO05D006631 4.9e-27 125.2 101 53.5
CiPaw.02G035200 Carya illinoinensis HOM05D005182 ORTHO05D006631 1.1e-26 124.0 98 59.2
QL09p000526 Quercus lobata HOM05D005182 ORTHO05D006631 3.2e-26 122.5 96 57.3
BcaC01g01215 Brassica carinata HOM05D005182 ORTHO05D006631 7.0e-26 121.3 146 45.2
Ah.12g060430 Amaranthus hybridus HOM05D005182 ORTHO05D006631 1.2e-25 120.6 151 41.1
Duzib187G0244 Durio zibethinus HOM05D005182 ORTHO05D006631 5.0e-24 115.2 98 55.1
Sc19g0005880 Simmondsia chinensis HOM05D005182 ORTHO05D006631 5.0e-24 115.2 145 42.8
AagrBONN_evm.TU.Sc2ySwM_228.389 Anthoceros agrestis HOM05D005182 ORTHO05D006631 6.6e-24 114.8 139 41.7
Cre04.g214100 Chlamydomonas reinhardtii HOM05D005182 ORTHO05D006631 5.6e-23 111.7 130 40.8
arahy.Tifrunner.gnm1.ann1.C5A6Z1 Arachis hypogaea HOM05D005182 ORTHO05D006631 5.2e-21 105.1 116 45.7
EL10Ac6g14578 Beta vulgaris HOM05D002842 ORTHO05D003177 1.3e-19 100.5 82 58.5
MSTRG.15523 Avicennia marina HOM05D005182 ORTHO05D006631 2.9e-19 99.4 85 56.5
EL10Ac5g10908 Beta vulgaris HOM05D005182 ORTHO05D006631 3.7e-19 99.0 82 57.3
EL10Ac6g13785 Beta vulgaris HOM05D005182 ORTHO05D006631 8.3e-19 97.8 82 57.3
Glyma.17G203751 Glycine max HOM05D005182 ORTHO05D006631 9.2e-18 94.4 75 53.3
Prupe.3G289700 Prunus persica HOM05D005182 ORTHO05D006631 5.1e-16 88.6 69 56.5
Hund04415 Selenicereus undatus HOM05D005182 ORTHO05D006631 2.5e-15 86.3 80 46.2
FAN05G5577 Fragaria x ananassa HOM05D005182 ORTHO05D006631 3.3e-15 85.9 86 48.8
Prupe.3G207400 Prunus persica HOM05D005182 ORTHO05D006631 3.3e-15 85.9 85 50.6
Cpa.g.sc171.39 Carica papaya HOM05D005182 ORTHO05D006631 5.2e-13 78.6 66 54.5
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 2.0e-12 76.6 90 40.0
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 5.8e-12 75.1 54 61.1
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 1.3e-11 73.9 85 43.5
Ah.15g100150 Amaranthus hybridus HOM05D008863 ORTHO05D006631 8.3e-11 71.2 63 46.0
RcHm_v2.0_Chr7g0228061 Rosa chinensis HOM05D005182 ORTHO05D006631 8.3e-11 71.2 68 47.1
Cpa.g.c30633.2 Carica papaya HOM05D005182 ORTHO05D006631 1.3e-08 63.9 53 49.1
Zm00001eb085260 Zea mays HOM05D005182 ORTHO05D006631 3.0e-08 62.8 46 60.9
PRCOL_00005828 Prasinoderma coloniale HOM05D005182 ORTHO05D006631 6.6e-08 61.6 77 37.7


User provided reference genes

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