Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 9.2e-145 516.9 269 100.0
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 7.9e-88 327.8 268 67.9
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 2.6e-75 286.2 247 63.2
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 1.0e-63 247.7 247 57.9
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 4.4e-62 242.3 249 58.2
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 9.7e-62 241.1 269 57.2
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 1.8e-60 236.9 247 55.9
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 1.5e-59 233.8 247 55.1
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 5.2e-55 218.8 254 50.8
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 6.7e-55 218.4 249 54.2
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 1.8e-47 193.7 161 62.1
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 6.5e-42 175.3 208 49.5
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 1.4e-39 167.5 201 50.2
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.0e-39 166.4 208 48.1
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 3.0e-39 166.4 201 49.3
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.4e-38 162.9 205 47.3
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 2.2e-37 160.2 203 48.3
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 4.1e-36 156.0 116 69.8
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 1.7e-34 150.6 193 44.6
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 2.9e-34 149.8 192 47.9
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 4.2e-33 146.0 203 40.9
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 4.2e-33 146.0 238 43.3
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 7.2e-33 145.2 203 42.9
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 2.8e-32 143.3 201 43.8
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 3.6e-32 142.9 200 42.5
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 8.0e-32 141.7 200 42.0
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 1.4e-31 141.0 215 44.2
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.8e-31 140.6 200 42.0
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 2.3e-31 140.2 204 44.1
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 8.8e-31 138.3 200 40.0
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.7e-29 134.0 200 39.5
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 2.2e-29 133.7 248 40.7
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 6.3e-29 132.1 205 41.0
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 7.0e-28 128.6 163 47.9
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 7.0e-28 128.6 162 47.5
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 1.2e-27 127.9 177 42.4
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 7.8e-27 125.2 174 40.2
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 1.3e-26 124.4 179 42.5
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 3.8e-26 122.9 166 41.6
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 1.2e-24 117.9 162 43.8
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 1.2e-24 117.9 252 36.1
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.4e-23 114.4 213 38.0
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.5e-22 110.9 173 41.6
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 1.5e-22 110.9 161 42.2
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 5.7e-22 109.0 173 41.0
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 9.8e-22 108.2 182 41.2
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 2.2e-21 107.1 119 47.9
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 4.9e-21 105.9 146 37.0
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 1.4e-20 104.4 70 74.3
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 5.4e-20 102.4 230 31.7
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 7.8e-19 98.6 172 37.8
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 7.8e-19 98.6 153 40.5
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 6.6e-18 95.5 138 41.3
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.1e-17 94.7 124 44.4
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 7.5e-14 82.0 201 32.3
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 2.2e-13 80.5 201 31.8
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 2.4e-12 77.0 150 38.7
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 2.4e-12 77.0 156 37.2
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 1.6e-11 74.3 191 35.6
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 2.5e-09 67.0 55 54.5
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 1.6e-08 64.3 116 33.6
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 2.8e-08 63.5 153 30.7
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 4.7e-08 62.8 116 37.9


User provided reference genes

Program Settings