Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 5.1e-61 237.7 128 100.0
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 1.7e-48 196.1 123 86.2
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 7.1e-47 190.7 122 84.4
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 9.3e-47 190.3 123 84.6
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 1.0e-40 170.2 123 76.4
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 1.0e-37 160.2 128 71.9
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 2.3e-37 159.1 129 71.3
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 5.1e-37 157.9 122 68.9
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 5.1e-37 157.9 122 68.9
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 1.7e-35 152.9 121 67.8
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 2.8e-35 152.1 129 68.2
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 4.1e-34 148.3 109 75.2
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 3.4e-33 145.2 106 73.6
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 3.4e-33 145.2 123 63.4
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 1.3e-32 143.3 126 62.7
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 1.3e-32 143.3 124 66.9
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 3.8e-32 141.7 132 60.6
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 6.5e-32 141.0 131 60.3
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 5.5e-31 137.9 128 57.0
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 7.2e-31 137.5 122 63.1
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 9.4e-31 137.1 131 63.4
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.6e-30 136.3 124 61.3
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 2.1e-30 136.0 128 56.2
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.1e-30 136.0 128 56.2
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 4.7e-30 134.8 128 57.0
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 7.9e-30 134.0 107 70.1
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 7.9e-30 134.0 126 57.9
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 1.4e-29 133.3 124 62.1
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 1.8e-29 132.9 133 56.4
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 2.3e-29 132.5 130 59.2
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 5.1e-29 131.3 128 60.2
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 6.7e-29 131.0 133 55.6
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 1.5e-28 129.8 130 61.5
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 2.0e-28 129.4 135 55.6
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.7e-27 126.3 124 57.3
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 2.2e-27 125.9 125 61.6
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 2.8e-27 125.6 124 58.1
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 4.8e-27 124.8 149 51.7
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 6.3e-27 124.4 105 62.9
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 1.1e-26 123.6 133 51.9
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 1.1e-26 123.6 135 54.1
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 1.1e-26 123.6 133 57.9
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 1.4e-26 123.2 135 54.1
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 1.8e-26 122.9 113 59.3
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 3.1e-26 122.1 125 60.0
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 7.0e-26 120.9 108 60.2
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 7.0e-26 120.9 123 56.1
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 2.0e-25 119.4 122 54.1
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 2.6e-25 119.0 123 56.9
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.6e-25 119.0 102 58.8
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 2.6e-25 119.0 128 52.3
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 4.5e-25 118.2 115 56.5
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 7.7e-25 117.5 108 56.5
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 7.7e-25 117.5 112 58.0
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 7.7e-25 117.5 133 56.4
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 1.3e-24 116.7 134 53.7
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 2.2e-24 115.9 124 54.0
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 2.9e-24 115.5 109 61.5
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 5.0e-24 114.8 129 50.4
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 6.5e-24 114.4 130 53.1
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 8.5e-24 114.0 136 51.5
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 8.5e-24 114.0 121 56.2
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 1.1e-23 113.6 130 52.3
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 1.5e-23 113.2 125 53.6
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 2.5e-23 112.5 129 52.7
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 3.2e-23 112.1 121 55.4
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 3.2e-23 112.1 108 57.4
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 4.2e-23 111.7 128 51.6
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 5.5e-23 111.3 121 48.8
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 5.5e-23 111.3 121 48.8
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 5.5e-23 111.3 121 48.8
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 5.5e-23 111.3 121 51.2
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 5.5e-23 111.3 122 51.6
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 7.2e-23 110.9 121 50.4
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 1.2e-22 110.2 121 52.9
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 1.2e-22 110.2 108 56.5
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 1.6e-22 109.8 121 50.4
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.6e-22 109.8 121 49.6
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 1.6e-22 109.8 121 50.4
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 2.1e-22 109.4 121 49.6
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 2.1e-22 109.4 131 50.4
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 3.6e-22 108.6 121 50.4
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 3.6e-22 108.6 158 46.2
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 8.0e-22 107.5 128 50.8
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 8.0e-22 107.5 128 50.8
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 8.0e-22 107.5 128 50.8
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.4e-21 106.7 77 68.8
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.4e-21 106.7 77 68.8
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.8e-21 106.3 105 55.2
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 3.0e-21 105.5 78 64.1
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 3.0e-21 105.5 78 64.1
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 6.7e-21 104.4 124 47.6
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 3.3e-20 102.1 153 41.8
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 4.4e-20 101.7 99 56.6
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 4.4e-20 101.7 130 49.2
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 9.7e-20 100.5 126 52.4
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 3.7e-19 98.6 78 61.5
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 4.8e-19 98.2 101 53.5
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 6.3e-19 97.8 81 58.0
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 6.3e-19 97.8 136 50.0
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 1.8e-18 96.3 108 50.9
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 1.2e-17 93.6 121 48.8
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 1.6e-17 93.2 126 46.8
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 2.0e-17 92.8 86 58.1
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 2.9e-16 89.0 113 48.7
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 1.4e-13 80.1 70 55.7
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 2.3e-13 79.3 126 42.1
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 5.2e-13 78.2 77 55.8
Mapoly0084s0018 Marchantia polymorpha HOM05D007045 ORTHO05D008872 5.0e-08 61.6 138 33.3
CBR_g50944 Chara braunii HOM05D007045 ORTHO05D008872 9.4e-07 57.4 152 32.9
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 2.7e-06 55.8 120 38.3
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 6.1e-06 54.7 131 38.9


User provided reference genes

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