Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g048920 Pisum sativum HOM05D001384 ORTHO05D001215 5.7e-21 103.6 64 100.0
Medtr6g090535 Medicago truncatula HOM05D001384 ORTHO05D001215 1.7e-17 92.0 64 78.1
Lj2g0025499 Lotus japonicus HOM05D001384 ORTHO05D001215 1.9e-16 88.6 64 82.8
Glyma.01G004600 Glycine max HOM05D001384 ORTHO05D001215 5.2e-14 80.5 66 74.2
Glyma.07G127200 Glycine max HOM05D001384 ORTHO05D001215 2.6e-13 78.2 64 67.2
arahy.Tifrunner.gnm1.ann1.3Z4R3A Arachis hypogaea HOM05D001384 ORTHO05D001215 6.4e-12 73.6 64 65.6
arahy.Tifrunner.gnm1.ann1.TI6HCL Arachis hypogaea HOM05D001384 ORTHO05D001215 6.4e-12 73.6 64 65.6
Thecc.09G095500 Theobroma cacao HOM05D001384 ORTHO05D001215 1.9e-11 72.0 64 62.5
Lalb_Chr22g0349831 Lupinus albus HOM05D001384 ORTHO05D001215 3.2e-11 71.2 64 62.5
Prupe.7G215700 Prunus persica HOM05D001384 ORTHO05D001215 7.0e-11 70.1 64 60.9
Phvul.004G173101 Phaseolus vulgaris HOM05D001384 ORTHO05D001215 4.6e-10 67.4 64 62.5
Migut.J01071 Erythranthe guttata HOM05D001384 ORTHO05D001215 1.3e-09 65.9 64 62.5
Lalb_Chr24g0393961 Lupinus albus HOM05D001384 ORTHO05D001215 1.3e-09 65.9 64 62.5
MD02G1072000 Malus domestica HOM05D001384 ORTHO05D001215 1.3e-09 65.9 64 56.2
Peaxi162Scf00498g00030 Petunia axillaris HOM05D001384 ORTHO05D001215 1.7e-09 65.5 64 56.2
Nitab4.5_0000540g0040 Nicotiana tabacum HOM05D001384 ORTHO05D001215 2.3e-09 65.1 64 57.8
GSVIVG01028741001 Vitis vinifera HOM05D001384 ORTHO05D001215 3.0e-09 64.7 63 55.6
MD15G1201800 Malus domestica HOM05D001384 ORTHO05D001215 5.0e-09 63.9 64 54.7
TAR626G0551 Trochodendron aralioides HOM05D001384 ORTHO05D001215 1.5e-08 62.4 64 53.1
HanXRQChr10g0319041 Helianthus annuus HOM05D001384 ORTHO05D001215 1.9e-08 62.0 64 56.2
CSS0002673 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 2.5e-08 61.6 68 64.7
CSS0049312 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 2.5e-08 61.6 68 64.7
Actinidia27339 Actinidia chinensis HOM05D001384 ORTHO05D001215 5.6e-08 60.5 63 54.0
Haze_25860 Corylus avellana HOM05D001384 ORTHO05D001215 5.6e-08 60.5 72 62.5
DCAR_012014 Daucus carota HOM05D001384 ORTHO05D001215 5.6e-08 60.5 64 68.8
Duzib133G0751 Durio zibethinus HOM05D001384 ORTHO05D001215 7.3e-08 60.1 54 59.3
Potri.014G094800 Populus trichocarpa HOM05D001384 ORTHO05D001215 1.2e-07 59.3 54 64.8
CSS0028432 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 1.6e-07 58.9 67 62.7
Dinv37556 Davidia involucrata HOM05D001384 ORTHO05D001215 2.1e-07 58.5 63 54.0
TWI39G0811 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 2.1e-07 58.5 64 54.7
TAR375G0324 Trochodendron aralioides HOM05D001384 ORTHO05D001215 2.1e-07 58.5 63 50.8
DCAR_010686 Daucus carota HOM05D001384 ORTHO05D001215 2.8e-07 58.2 65 63.1
Lalb_Chr23g0271451 Lupinus albus HOM05D001384 ORTHO05D001215 2.8e-07 58.2 55 58.2
RcHm_v2.0_Chr2g0092451 Rosa chinensis HOM05D001384 ORTHO05D001215 2.8e-07 58.2 65 53.8
TWI14G0223 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 2.8e-07 58.2 64 57.8
CANSAT21G1401 Cannabis sativa HOM05D001384 ORTHO05D001215 3.6e-07 57.8 64 54.7
FvH4_1g06710 Fragaria vesca HOM05D001384 ORTHO05D001215 3.6e-07 57.8 65 53.8
Gohir.A12G110700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 3.6e-07 57.8 54 57.4
Gohir.D11G099700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 3.6e-07 57.8 59 52.5
Gohir.D12G114000 Gossypium hirsutum HOM05D001384 ORTHO05D001215 3.6e-07 57.8 54 57.4
Gorai.007G105900 Gossypium raimondii HOM05D001384 ORTHO05D001215 3.6e-07 57.8 59 52.5
Gorai.008G123500 Gossypium raimondii HOM05D001384 ORTHO05D001215 3.6e-07 57.8 54 57.4
COL.COLO4_18260 Corchorus olitorius HOM05D001384 ORTHO05D001215 4.7e-07 57.4 56 62.5
Nitab4.5_0002944g0160 Nicotiana tabacum HOM05D001384 ORTHO05D001215 4.7e-07 57.4 54 57.4
HanXRQChr12g0355291 Helianthus annuus HOM05D001384 ORTHO05D001215 8.1e-07 56.6 64 59.4
TAR636G2986 Trochodendron aralioides HOM05D001384 ORTHO05D001215 8.1e-07 56.6 63 55.6
vmacro13148 Vaccinium macrocarpon HOM05D001384 ORTHO05D001215 8.1e-07 56.6 54 51.9
FAN23G2194 Fragaria x ananassa HOM05D001384 ORTHO05D001215 1.1e-06 56.2 65 52.3
HanXRQChr09g0238501 Helianthus annuus HOM05D001384 ORTHO05D001215 1.1e-06 56.2 64 50.0
Thecc.01G347500 Theobroma cacao HOM05D001384 ORTHO05D001215 1.1e-06 56.2 54 55.6
CiPaw.03G220500 Carya illinoinensis HOM05D001384 ORTHO05D001215 1.4e-06 55.8 65 53.8
Haze_08680 Corylus avellana HOM05D001384 ORTHO05D001215 1.4e-06 55.8 53 52.8
Gohir.A10G199650 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.4e-06 55.8 59 50.8
GSVIVG01015262001 Vitis vinifera HOM05D001384 ORTHO05D001215 1.4e-06 55.8 66 62.1
AT5G24105 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 1.8e-06 55.5 55 54.5
Carub.0006s2183 Capsella rubella HOM05D001384 ORTHO05D001215 1.8e-06 55.5 64 48.4
Gohir.A11G094700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.8e-06 55.5 59 59.3
QL02p031550 Quercus lobata HOM05D001384 ORTHO05D001215 1.8e-06 55.5 63 47.6
Eucgr.C03697 Eucalyptus grandis HOM05D001384 ORTHO05D001215 2.3e-06 55.1 69 52.2
Gohir.A10G068700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 2.3e-06 55.1 59 49.2
Lsat_1_v5_gn_7_38720 Lactuca sativa HOM05D001384 ORTHO05D001215 2.3e-06 55.1 64 54.7
Cc06_g10880 Coffea canephora HOM05D001384 ORTHO05D001215 3.1e-06 54.7 65 60.0
Migut.K00567 Erythranthe guttata HOM05D001384 ORTHO05D001215 4.0e-06 54.3 65 58.5
Duzib138G1328 Durio zibethinus HOM05D001384 ORTHO05D001215 5.2e-06 53.9 59 50.8
FAN28G1521 Fragaria x ananassa HOM05D001384 ORTHO05D001215 5.2e-06 53.9 65 49.2
MBI07_g20448_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 5.2e-06 53.9 63 49.2
PGSC0003DMG400019380 Solanum tuberosum HOM05D001384 ORTHO05D001215 5.2e-06 53.9 53 56.6
THA.LOC104821373 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 5.2e-06 53.9 64 46.9
Cc08_g15710 Coffea canephora HOM05D001384 ORTHO05D001215 6.8e-06 53.5 34 73.5
PGR042G2194 Punica granatum HOM05D001384 ORTHO05D001215 6.8e-06 53.5 64 54.7
Solyc10g011730.3 Solanum lycopersicum HOM05D001384 ORTHO05D001215 6.8e-06 53.5 53 54.7
Sopen10g005520 Solanum pennellii HOM05D001384 ORTHO05D001215 6.8e-06 53.5 53 54.7
HPP92_026774 Vanilla planifolia HOM05D001384 ORTHO05D001215 6.8e-06 53.5 59 52.5
CAN.G792.67 Capsicum annuum HOM05D001384 ORTHO05D001215 8.9e-06 53.1 57 52.6
CiPaw.11G124600 Carya illinoinensis HOM05D001384 ORTHO05D001215 8.9e-06 53.1 64 46.9
COL.COLO4_06332 Corchorus olitorius HOM05D001384 ORTHO05D001215 8.9e-06 53.1 59 49.2
Nitab4.5_0003781g0080 Nicotiana tabacum HOM05D001384 ORTHO05D001215 8.9e-06 53.1 64 59.4
GSVIVG01019489001 Vitis vinifera HOM05D001384 ORTHO05D001215 8.9e-06 53.1 64 50.0


User provided reference genes

Program Settings