Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 1.2e-74 283.1 143 100.0
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 9.4e-72 273.5 142 97.9
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 8.8e-70 266.9 139 97.1
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 1.2e-66 256.5 167 82.6
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 2.8e-60 235.3 139 84.9
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 2.0e-58 229.2 139 84.2
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 2.2e-57 225.7 135 81.5
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 1.9e-56 222.6 127 85.0
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 1.2e-55 219.9 139 78.4
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 2.1e-55 219.2 139 78.4
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 2.7e-55 218.8 134 83.6
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 2.3e-54 215.7 135 79.3
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 2.2e-52 209.1 135 77.8
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 3.8e-49 198.4 166 65.1
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 1.2e-47 193.4 133 71.4
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 1.0e-46 190.3 181 60.2
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.4e-46 189.9 133 69.9
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 1.4e-46 189.9 133 68.4
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 3.0e-46 188.7 131 71.8
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 4.0e-46 188.3 135 68.9
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 6.8e-46 187.6 140 64.3
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 7.5e-45 184.1 135 68.9
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 7.5e-45 184.1 135 68.1
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 7.5e-45 184.1 136 68.4
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 7.5e-45 184.1 136 68.4
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 9.8e-45 183.7 131 70.2
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 1.3e-44 183.3 136 69.1
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 1.3e-44 183.3 137 67.9
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 1.7e-44 183.0 133 68.4
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.8e-44 182.2 131 69.5
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.8e-44 182.2 131 69.5
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 2.8e-44 182.2 140 65.7
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 3.7e-44 181.8 127 68.5
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 3.7e-44 181.8 120 72.5
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 6.3e-44 181.0 131 69.5
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 8.3e-44 180.6 120 72.5
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 8.3e-44 180.6 135 68.1
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 1.4e-43 179.9 135 67.4
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 3.1e-43 178.7 133 66.9
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 3.1e-43 178.7 120 71.7
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 7.0e-43 177.6 131 66.4
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 7.0e-43 177.6 135 67.4
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 2.0e-42 176.0 135 66.7
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 4.5e-42 174.9 140 64.3
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 2.3e-41 172.6 118 69.5
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 2.3e-41 172.6 118 69.5
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 1.1e-40 170.2 137 62.8
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 1.9e-40 169.5 119 68.9
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 2.5e-40 169.1 139 62.6
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 2.5e-40 169.1 151 57.6
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 2.5e-40 169.1 131 62.6
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 5.5e-40 167.9 135 63.0
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 5.5e-40 167.9 122 68.0
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 1.2e-39 166.8 134 60.4
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 1.2e-39 166.8 157 56.1
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 2.1e-39 166.0 138 62.3
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 2.8e-39 165.6 131 60.3
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 2.8e-39 165.6 139 62.6
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 3.6e-39 165.2 123 68.3
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 3.6e-39 165.2 135 60.7
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 6.1e-39 164.5 134 60.4
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 6.1e-39 164.5 141 57.4
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 8.0e-39 164.1 123 64.2
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 1.0e-38 163.7 119 64.7
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.8e-38 162.9 131 62.6
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 1.8e-38 162.9 123 63.4
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 1.8e-38 162.9 131 58.0
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 1.8e-38 162.9 139 59.7
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 2.3e-38 162.5 122 64.8
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 2.0e-37 159.5 113 69.0
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 3.4e-37 158.7 113 69.0
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 3.4e-37 158.7 113 69.0
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 7.5e-37 157.5 118 63.6
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 9.8e-37 157.1 115 67.8
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 1.3e-36 156.8 124 66.1
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 1.3e-36 156.8 111 71.2
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 1.7e-36 156.4 125 64.0
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 1.7e-36 156.4 123 65.0
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 2.2e-36 156.0 136 58.8
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 2.2e-36 156.0 114 67.5
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 6.3e-36 154.5 120 64.2
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 6.3e-36 154.5 131 59.5
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 1.4e-35 153.3 114 67.5
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 1.4e-35 153.3 120 64.2
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 1.8e-35 152.9 110 68.2
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 1.8e-35 152.9 125 61.6
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 3.1e-35 152.1 120 64.2
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 3.1e-35 152.1 115 65.2
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 9.2e-35 150.6 116 62.9
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 4.5e-34 148.3 125 60.8
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 1.3e-33 146.7 138 56.5
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 1.5e-32 143.3 119 63.0
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 1.5e-32 143.3 128 57.8
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 3.3e-32 142.1 134 53.0
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 7.3e-32 141.0 115 63.5
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 2.8e-31 139.0 115 63.5
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 4.7e-31 138.3 118 56.8
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 5.2e-30 134.8 134 53.0
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 3.4e-29 132.1 168 46.4
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 2.4e-27 125.9 195 40.0
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 3.5e-26 122.1 129 52.7
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 1.0e-25 120.6 134 46.3
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 1.1e-22 110.5 121 46.3
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 1.2e-21 107.1 135 45.9
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 4.4e-21 105.1 118 46.6
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 7.3e-16 87.8 145 40.0
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 4.0e-14 82.0 54 70.4
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 3.7e-12 75.5 57 63.2
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 1.9e-11 73.2 136 39.7
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 7.8e-10 67.8 83 50.6
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 1.3e-09 67.0 50 62.0
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 3.9e-09 65.5 83 49.4
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 5.1e-09 65.1 50 70.0
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 1.5e-08 63.5 50 58.0
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 3.3e-08 62.4 116 37.1
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 5.2e-06 55.1 38 76.3


User provided reference genes

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