Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g045000 Pisum sativum HOM05D002816 ORTHO05D020972 4.4e-170 601.3 320 100.0
Psat1g045080 Pisum sativum HOM05D002816 ORTHO05D005633 7.8e-135 484.2 312 84.0
Psat6g177280 Pisum sativum HOM05D002816 ORTHO05D020972 3.9e-94 349.0 238 82.8
Psat5g289080 Pisum sativum HOM05D002816 ORTHO05D005633 1.3e-92 344.0 370 58.1
TPR.G18843 Trifolium pratense HOM05D002816 ORTHO05D005633 4.5e-90 335.5 379 55.4
Medtr2g098490 Medicago truncatula HOM05D002816 ORTHO05D005633 1.4e-86 323.9 372 55.1
Lj3g0016219 Lotus japonicus HOM05D002816 ORTHO05D005633 2.0e-77 293.5 309 56.6
Glyma.15G031700 Glycine max HOM05D002816 ORTHO05D005633 9.7e-77 291.2 314 56.1
Glyma.13G342600 Glycine max HOM05D002816 ORTHO05D005633 6.3e-76 288.5 314 55.4
Lj3g0024115 Lotus japonicus HOM05D002816 ORTHO05D005633 7.7e-74 281.6 255 62.4
arahy.Tifrunner.gnm1.ann1.YK6NC6 Arachis hypogaea HOM05D002816 ORTHO05D005633 1.8e-70 270.4 337 49.6
arahy.Tifrunner.gnm1.ann1.4LCW9K Arachis hypogaea HOM05D002816 ORTHO05D005633 6.7e-70 268.5 337 49.9
VMungo1080G0972 Vigna mungo HOM05D002816 ORTHO05D005633 1.7e-68 263.8 381 45.9
VMungo1127G0859 Vigna mungo HOM05D002816 ORTHO05D005633 8.5e-65 251.5 306 50.0
Psat7g213680 Pisum sativum HOM05D002816 ORTHO05D005633 8.0e-63 245.0 307 49.5
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 1.0e-62 244.6 307 48.9
arahy.Tifrunner.gnm1.ann1.S74NHW Arachis hypogaea HOM05D002816 ORTHO05D005633 1.2e-61 241.1 371 44.7
Haze_23048 Corylus avellana HOM05D002816 ORTHO05D005633 4.4e-61 239.2 307 46.9
Medtr4g066130 Medicago truncatula HOM05D002816 ORTHO05D005633 7.5e-61 238.4 307 48.5
arahy.Tifrunner.gnm1.ann1.D5VX0F Arachis hypogaea HOM05D002816 ORTHO05D005633 2.2e-60 236.9 379 44.1
Cfa009698 Carpinus fangiana HOM05D002816 ORTHO05D005633 1.4e-59 234.2 307 45.9
Lalb_Chr03g0026201 Lupinus albus HOM05D002816 ORTHO05D005633 1.4e-59 234.2 309 46.9
Manes.14G014200 Manihot esculenta HOM05D002816 ORTHO05D005633 1.0e-57 228.0 309 45.0
Psat7g208880 Pisum sativum HOM05D002816 ORTHO05D020972 2.3e-57 226.9 121 98.3
Potri.003G210701 Populus trichocarpa HOM05D002816 ORTHO05D005633 3.8e-57 226.1 350 42.0
Dinv36301 Davidia involucrata HOM05D002816 ORTHO05D005633 5.0e-57 225.7 310 45.5
Potri.003G210600 Populus trichocarpa HOM05D002816 ORTHO05D005633 5.0e-57 225.7 350 42.0
Atru.chr3.2513 Acer truncatum HOM05D002816 ORTHO05D005633 1.1e-56 224.6 307 45.0
Phvul.011G056700 Phaseolus vulgaris HOM05D002816 ORTHO05D005633 4.2e-56 222.6 216 58.3
CSS0044925 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 7.2e-56 221.9 296 47.0
Potri.T085701 Populus trichocarpa HOM05D002816 ORTHO05D005633 7.2e-56 221.9 350 41.4
Ciclev10017962m.g Citrus clementina HOM05D002816 ORTHO05D005633 9.5e-56 221.5 307 43.0
Hma1.2p1_2304F.1_g319340 Hydrangea macrophylla HOM05D002816 ORTHO05D005633 9.5e-56 221.5 346 40.5
CSS0023415 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.6e-55 220.7 302 45.7
Eucgr.J00816 Eucalyptus grandis HOM05D002816 ORTHO05D005633 1.6e-55 220.7 305 43.6
Eucgr.J00810 Eucalyptus grandis HOM05D002816 ORTHO05D005633 2.1e-55 220.3 305 43.9
DCAR_023760 Daucus carota HOM05D002816 ORTHO05D005633 8.0e-55 218.4 300 46.0
TWI75G1088 Tripterygium wilfordii HOM05D002816 ORTHO05D005633 1.0e-54 218.0 371 39.6
TAR163G0001 Trochodendron aralioides HOM05D002816 ORTHO05D005633 1.0e-54 218.0 307 43.0
Psat0s4110g0040 Pisum sativum HOM05D002816 ORTHO05D020972 2.3e-54 216.9 115 99.1
COL.COLO4_09898 Corchorus olitorius HOM05D002816 ORTHO05D005633 3.0e-54 216.5 312 44.9
CiPaw.13G165300 Carya illinoinensis HOM05D002816 ORTHO05D005633 5.2e-54 215.7 308 43.8
QL01p006152 Quercus lobata HOM05D002816 ORTHO05D005633 5.2e-54 215.7 303 43.6
Thecc.09G223700 Theobroma cacao HOM05D002816 ORTHO05D005633 5.2e-54 215.7 309 43.7
Duzib150G1626 Durio zibethinus HOM05D002816 ORTHO05D005633 1.2e-53 214.5 307 45.0
Psat3g108720 Pisum sativum HOM05D002816 ORTHO05D020972 2.6e-53 213.4 124 91.9
Eucgr.J00812 Eucalyptus grandis HOM05D002816 ORTHO05D005633 3.4e-53 213.0 291 43.6
CANSAT54G2844 Cannabis sativa HOM05D002816 ORTHO05D005633 5.7e-53 212.2 331 43.2
GSVIVG01025332001 Vitis vinifera HOM05D002816 ORTHO05D005633 1.7e-52 210.7 306 42.5
Cpa.g.sc84.106 Carica papaya HOM05D002816 ORTHO05D005633 1.8e-51 207.2 344 37.8
Psat7g208840 Pisum sativum HOM05D002816 ORTHO05D020972 4.1e-51 206.1 161 73.3
Gohir.A05G067400 Gossypium hirsutum HOM05D002816 ORTHO05D005633 2.0e-50 203.8 311 41.8
PGR119G0739 Punica granatum HOM05D002816 ORTHO05D005633 2.0e-50 203.8 306 40.5
Gorai.009G071300 Gossypium raimondii HOM05D002816 ORTHO05D005633 2.7e-50 203.4 307 42.0
Aqoxy1G00177 Aquilegia oxysepala HOM05D002816 ORTHO05D005633 4.5e-50 202.6 301 42.2
Gohir.D05G070300 Gossypium hirsutum HOM05D002816 ORTHO05D005633 4.5e-50 202.6 307 42.0
MBI04_g14277_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 1.3e-49 201.1 273 44.3
CSS0039119 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.7e-49 200.7 309 41.1
Lsat_1_v5_gn_2_101081 Lactuca sativa HOM05D002816 ORTHO05D005633 2.3e-49 200.3 362 38.1
MD03G1020900 Malus domestica HOM05D002816 ORTHO05D005633 2.3e-49 200.3 308 40.6
ECA238G3506 Erigeron canadensis HOM05D002816 ORTHO05D005633 2.9e-49 199.9 307 41.4
FAN25G1910 Fragaria x ananassa HOM05D002816 ORTHO05D005633 2.9e-49 199.9 306 40.2
MD11G1022500 Malus domestica HOM05D002816 ORTHO05D005633 8.6e-49 198.4 308 40.9
RcHm_v2.0_Chr5g0078141 Rosa chinensis HOM05D002816 ORTHO05D005633 3.3e-48 196.4 306 40.2
Prupe.6G018300 Prunus persica HOM05D002816 ORTHO05D005633 4.3e-48 196.1 308 39.6
FAN16G1696 Fragaria x ananassa HOM05D002816 ORTHO05D005633 5.6e-48 195.7 306 39.9
Sopen01g002630 Solanum pennellii HOM05D002816 ORTHO05D005633 9.5e-48 194.9 291 42.6
Oeu014059.1 Olea europaea HOM05D002816 ORTHO05D005633 1.2e-47 194.5 309 39.2
FvH4_3g43570 Fragaria vesca HOM05D002816 ORTHO05D005633 1.6e-47 194.1 306 39.5
FAN11G3609 Fragaria x ananassa HOM05D002816 ORTHO05D005633 1.6e-47 194.1 306 39.5
Cc01_g04160 Coffea canephora HOM05D002816 ORTHO05D005633 3.6e-47 193.0 293 42.7
Solyc01g006640.1 Solanum lycopersicum HOM05D002816 ORTHO05D005633 3.6e-47 193.0 296 40.9
HanXRQChr07g0196931 Helianthus annuus HOM05D002816 ORTHO05D005633 4.7e-47 192.6 305 39.7
FAN21G1421 Fragaria x ananassa HOM05D002816 ORTHO05D005633 8.0e-47 191.8 306 39.2
PGR119G2184 Punica granatum HOM05D002816 ORTHO05D005633 8.0e-47 191.8 373 35.1
Actinidia39380 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.8e-46 190.7 216 52.3
Peaxi162Scf00559g00421 Petunia axillaris HOM05D002816 ORTHO05D005633 3.0e-46 189.9 293 42.7
PGSC0003DMG400021382 Solanum tuberosum HOM05D002816 ORTHO05D005633 4.0e-46 189.5 291 41.2
CAN.G388.65 Capsicum annuum HOM05D002816 ORTHO05D005633 5.2e-46 189.1 291 41.9
Nitab4.5_0003796g0070 Nicotiana tabacum HOM05D002816 ORTHO05D005633 8.9e-46 188.3 293 41.6
ECA233G1587 Erigeron canadensis HOM05D002816 ORTHO05D005633 3.4e-45 186.4 357 35.9
Actinidia16293 Actinidia chinensis HOM05D002816 ORTHO05D005633 4.4e-45 186.0 278 45.0
Migut.D00561 Erythranthe guttata HOM05D002816 ORTHO05D005633 5.7e-45 185.7 305 40.0
Lju1319A3T41 Lonicera japonica HOM05D002816 ORTHO05D005633 5.7e-45 185.7 295 41.0
ECA233G2205 Erigeron canadensis HOM05D002816 ORTHO05D005633 7.5e-45 185.3 314 38.2
vmacro22895 Vaccinium macrocarpon HOM05D002816 ORTHO05D005633 3.7e-44 183.0 292 40.4
MBI04_g27132_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 4.9e-44 182.6 306 39.5
MBI04_g27134_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 7.0e-43 178.7 311 37.9
Nitab4.5_0009808g0040 Nicotiana tabacum HOM05D002816 ORTHO05D005633 7.0e-43 178.7 293 40.6
DCAR_029714 Daucus carota HOM05D002816 ORTHO05D005633 9.2e-43 178.3 299 39.1
Lsat_1_v5_gn_6_50161 Lactuca sativa HOM05D002816 ORTHO05D005633 2.7e-42 176.8 294 38.4
Psat6g115360 Pisum sativum HOM05D002816 ORTHO05D020972 7.8e-42 175.3 109 88.1
HanXRQChr02g0056791 Helianthus annuus HOM05D002816 ORTHO05D005633 1.0e-41 174.9 307 36.8
Cc01_g04080 Coffea canephora HOM05D002816 ORTHO05D005633 1.7e-41 174.1 214 49.1
Lsat_1_v5_gn_6_50280 Lactuca sativa HOM05D002816 ORTHO05D005633 8.6e-41 171.8 346 35.0
Sopen01g002590 Solanum pennellii HOM05D002816 ORTHO05D005633 1.9e-40 170.6 288 39.2
CAN.G388.66 Capsicum annuum HOM05D002816 ORTHO05D005633 7.3e-40 168.7 288 39.9
Sed0025537 Sechium edule HOM05D002816 ORTHO05D005633 9.5e-40 168.3 292 36.6
CsaV3_4G023760 Cucumis sativus L. HOM05D002816 ORTHO05D005633 2.1e-39 167.2 292 37.7
ClCG02G023650 Citrullus lanatus HOM05D002816 ORTHO05D005633 3.6e-39 166.4 292 38.4
Zm00001eb079870 Zea mays HOM05D002816 ORTHO05D005633 1.1e-38 164.9 304 36.2
MELO3C014642.2 Cucumis melo HOM05D002816 ORTHO05D005633 2.3e-38 163.7 292 38.0
Migut.N02292 Erythranthe guttata HOM05D002816 ORTHO05D005633 5.2e-38 162.5 282 37.6
Ca_20583_v3 Cicer arietinum L. HOM05D002816 ORTHO05D005633 2.9e-36 156.8 232 46.6
Glyma.12G054833 Glycine max HOM05D002816 ORTHO05D005633 2.9e-36 156.8 199 52.3
SalBow5G4185 Salvia bowleyana HOM05D002816 ORTHO05D005633 2.4e-35 153.7 292 33.2
Lj1A364T31 Lonicera japonica HOM05D002816 ORTHO05D005633 1.6e-34 151.0 169 55.0
Solyc01g006600.3 Solanum lycopersicum HOM05D002816 ORTHO05D005633 4.6e-34 149.4 267 39.3
Os04g0473900 Oryza sativa ssp. japonica HOM05D002816 ORTHO05D005633 6.0e-34 149.1 289 36.3
ATR0605G130 Amborella trichopoda HOM05D002816 ORTHO05D005633 2.8e-31 140.2 304 32.6
Duzib168G1434 Durio zibethinus HOM05D002816 ORTHO05D005633 1.8e-30 137.5 142 54.9
CSS0015622 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 8.6e-25 118.6 221 39.4
SEGI_13421 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 9.5e-24 115.2 304 31.2
SEGI_08242 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 1.6e-23 114.4 303 32.3
SEGI_27256 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 6.2e-23 112.5 303 28.7
SEGI_08878 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 7.8e-18 95.5 97 47.4
AagrBONN_evm.TU.Sc2ySwM_344.2583 Anthoceros agrestis HOM05D002816 ORTHO05D005633 1.3e-17 94.7 341 28.4
SMO115G0335 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 1.7e-17 94.4 304 29.9
CAN.G396.13 Capsicum annuum HOM05D002719 ORTHO05D002938 2.3e-17 94.0 72 65.3
AagrBONN_evm.TU.Sc2ySwM_344.2597 Anthoceros agrestis HOM05D002816 ORTHO05D005633 1.1e-16 91.7 89 49.4
SMO166G0063 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 7.3e-16 89.0 299 29.4
Mapoly0023s0010 Marchantia polymorpha HOM05D002816 ORTHO05D005633 8.1e-15 85.5 313 24.3
ECA233G3676 Erigeron canadensis HOM05D000764 ORTHO05D002006 1.9e-11 74.3 79 45.6
Actinidia06322 Actinidia chinensis HOM05D002816 ORTHO05D005633 3.9e-09 66.6 43 76.7
Glyma.12G054767 Glycine max HOM05D002816 ORTHO05D005633 1.6e-07 61.2 35 82.9


User provided reference genes

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