Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g043040 Pisum sativum HOM05D000372 ORTHO05D003436 0.0e+00 1505.0 1801 100.0
Psat7g193560 Pisum sativum HOM05D000372 ORTHO05D003436 4.7e-59 235.0 121 99.2
Psat7g070360 Pisum sativum HOM05D000372 ORTHO05D003436 6.5e-53 214.5 111 99.1
Psat1g043080 Pisum sativum HOM05D000372 ORTHO05D003436 1.4e-52 213.4 112 97.3
Psat6g023640 Pisum sativum HOM05D000372 ORTHO05D003436 1.6e-51 209.9 110 97.3
Ca_13081_v3 Cicer arietinum L. HOM05D000372 ORTHO05D003436 6.3e-48 198.0 110 90.0
Medtr1g013360 Medicago truncatula HOM05D000372 ORTHO05D003436 1.7e-45 189.9 110 87.3
TPR.G38926 Trifolium pratense HOM05D000372 ORTHO05D003436 1.9e-44 186.4 110 87.3
Lj5g0022261 Lotus japonicus HOM05D000372 ORTHO05D003436 1.8e-42 179.9 110 84.5
arahy.Tifrunner.gnm1.ann1.54Q5ZL Arachis hypogaea HOM05D000372 ORTHO05D003436 1.2e-41 177.2 111 79.3
arahy.Tifrunner.gnm1.ann1.672M4G Arachis hypogaea HOM05D000372 ORTHO05D003436 1.2e-41 177.2 111 79.3
VMungo0647G1491 Vigna mungo HOM05D000372 ORTHO05D003436 7.5e-41 174.5 110 83.6
Glyma.14G105400 Glycine max HOM05D000372 ORTHO05D003436 1.7e-40 173.3 110 81.8
Lalb_Chr14g0375411 Lupinus albus HOM05D000372 ORTHO05D003436 1.7e-40 173.3 107 82.2
Glyma.17G220800 Glycine max HOM05D000372 ORTHO05D003436 2.4e-39 169.5 110 80.0
Phvul.001G043600 Phaseolus vulgaris HOM05D000372 ORTHO05D003436 4.1e-39 168.7 114 78.9
Phvul.009G084900 Phaseolus vulgaris HOM05D000372 ORTHO05D003436 4.5e-38 165.2 110 75.5
ClCG05G016010 Citrullus lanatus HOM05D000372 ORTHO05D003436 7.7e-38 164.5 104 77.9
Glyma.04G058400 Glycine max HOM05D000372 ORTHO05D003436 2.9e-37 162.5 109 76.1
Eucgr.C04019 Eucalyptus grandis HOM05D000372 ORTHO05D003436 6.5e-37 161.4 112 74.1
CsaV3_4G036290 Cucumis sativus L. HOM05D000372 ORTHO05D003436 8.5e-37 161.0 104 76.0
Glyma.U003300 Glycine max HOM05D000372 ORTHO05D003436 1.1e-36 160.6 109 73.4
Lj7C743T9 Lonicera japonica HOM05D000372 ORTHO05D003436 2.5e-36 159.5 106 75.5
TPR.G38882 Trifolium pratense HOM05D000372 ORTHO05D003436 2.5e-36 159.5 96 85.4
QL02p017417 Quercus lobata HOM05D000372 ORTHO05D003436 5.5e-36 158.3 107 72.0
Sed0022125 Sechium edule HOM05D000372 ORTHO05D003436 9.4e-36 157.5 104 76.0
MELO3C016937.2 Cucumis melo HOM05D000372 ORTHO05D003436 1.6e-35 156.8 104 74.0
Prupe.1G400900 Prunus persica HOM05D000372 ORTHO05D003436 1.6e-35 156.8 105 73.3
Sed0000787 Sechium edule HOM05D000372 ORTHO05D003436 3.6e-35 155.6 104 74.0
CiPaw.16G070900 Carya illinoinensis HOM05D000372 ORTHO05D003436 4.7e-35 155.2 110 72.7
TAR383G1081 Trochodendron aralioides HOM05D000372 ORTHO05D003436 6.1e-35 154.8 110 72.7
Lj1g0015187 Lotus japonicus HOM05D000372 ORTHO05D003436 1.4e-34 153.7 110 71.8
Gohir.D05G065500 Gossypium hirsutum HOM05D000372 ORTHO05D003436 1.8e-34 153.3 105 71.4
Cpa.g.sc23.44 Carica papaya HOM05D000372 ORTHO05D003436 2.3e-34 152.9 107 74.8
Gohir.A05G063000 Gossypium hirsutum HOM05D000372 ORTHO05D003436 2.3e-34 152.9 110 69.1
Gorai.009G066300 Gossypium raimondii HOM05D000372 ORTHO05D003436 2.3e-34 152.9 110 69.1
MD15G1046500 Malus domestica HOM05D000372 ORTHO05D003436 2.3e-34 152.9 109 70.6
Actinidia23121 Actinidia chinensis HOM05D000372 ORTHO05D003436 3.0e-34 152.5 106 71.7
TPR.G21426 Trifolium pratense HOM05D000372 ORTHO05D003436 3.0e-34 152.5 107 73.8
Dinv19797 Davidia involucrata HOM05D000372 ORTHO05D003436 4.0e-34 152.1 110 70.9
VMungo1309G2648 Vigna mungo HOM05D000372 ORTHO05D003436 5.2e-34 151.8 99 74.7
Thecc.09G009700 Theobroma cacao HOM05D000372 ORTHO05D003436 6.8e-34 151.4 105 71.4
Potri.006G270500 Populus trichocarpa HOM05D000372 ORTHO05D003436 8.8e-34 151.0 110 71.8
RcHm_v2.0_Chr6g0304671 Rosa chinensis HOM05D000372 ORTHO05D003436 8.8e-34 151.0 112 67.9
CANSAT25G2139 Cannabis sativa HOM05D000372 ORTHO05D003436 1.5e-33 150.2 130 60.8
Nn8g40299 Nelumbo nucifera HOM05D000372 ORTHO05D003436 1.5e-33 150.2 111 69.4
PGR044G0422 Punica granatum HOM05D000372 ORTHO05D003436 1.5e-33 150.2 127 65.4
Ca_15798_v3 Cicer arietinum L. HOM05D000372 ORTHO05D003436 2.0e-33 149.8 110 70.0
Potri.018G011400 Populus trichocarpa HOM05D000372 ORTHO05D003436 2.0e-33 149.8 106 71.7
TWI63G0489 Tripterygium wilfordii HOM05D000372 ORTHO05D003436 2.0e-33 149.8 110 71.8
MD08G1047400 Malus domestica HOM05D000372 ORTHO05D003436 3.4e-33 149.1 109 69.7
Oeu023248.1 Olea europaea HOM05D000372 ORTHO05D003436 3.4e-33 149.1 106 70.8
Aqoxy7G03181 Aquilegia oxysepala HOM05D000372 ORTHO05D003436 4.4e-33 148.7 106 69.8
Sabra18G0012300 Salix brachista HOM05D000372 ORTHO05D003436 4.4e-33 148.7 106 72.6
Duzib150G0268 Durio zibethinus HOM05D000372 ORTHO05D003436 5.7e-33 148.3 105 69.5
Duzib168G1416 Durio zibethinus HOM05D000372 ORTHO05D003436 7.5e-33 147.9 90 77.8
Gohir.A05G062700 Gossypium hirsutum HOM05D000372 ORTHO05D003436 7.5e-33 147.9 112 70.5
Gohir.D05G065200 Gossypium hirsutum HOM05D000372 ORTHO05D003436 7.5e-33 147.9 112 70.5
Gorai.009G066000 Gossypium raimondii HOM05D000372 ORTHO05D003436 7.5e-33 147.9 112 70.5
Oeu008769.1 Olea europaea HOM05D000372 ORTHO05D003436 7.5e-33 147.9 106 70.8
TWI32G0796 Tripterygium wilfordii HOM05D000372 ORTHO05D003436 7.5e-33 147.9 110 70.9
Ciclev10010162m.g Citrus clementina HOM05D000372 ORTHO05D003436 1.3e-32 147.1 107 73.8
Dinv06101 Davidia involucrata HOM05D000372 ORTHO05D003436 1.3e-32 147.1 125 60.8
Manes.16G133700 Manihot esculenta HOM05D000372 ORTHO05D003436 1.3e-32 147.1 106 72.6
Cfa017850 Carpinus fangiana HOM05D000372 ORTHO05D003436 1.7e-32 146.7 106 69.8
COL.COLO4_19011 Corchorus olitorius HOM05D000372 ORTHO05D003436 1.7e-32 146.7 110 71.8
Sabra06G0210300 Salix brachista HOM05D000372 ORTHO05D003436 1.7e-32 146.7 106 71.7
SalBow8G1746 Salvia bowleyana HOM05D000372 ORTHO05D003436 1.7e-32 146.7 112 67.9
SalBow8G4869 Salvia bowleyana HOM05D000372 ORTHO05D003436 1.7e-32 146.7 112 67.9
Duzib187G1714 Durio zibethinus HOM05D000372 ORTHO05D003436 2.8e-32 146.0 104 69.2
Medtr3g105590 Medicago truncatula HOM05D000372 ORTHO05D003436 2.8e-32 146.0 107 71.0
ATR0580G441 Amborella trichopoda HOM05D000372 ORTHO05D003436 4.8e-32 145.2 105 69.5
GSVIVG01033164001 Vitis vinifera HOM05D000372 ORTHO05D003436 8.3e-32 144.4 84 82.1
FAN15G3394 Fragaria x ananassa HOM05D000372 ORTHO05D003436 1.4e-31 143.7 109 68.8
Nitab4.5_0006884g0010 Nicotiana tabacum HOM05D000372 ORTHO05D003436 1.8e-31 143.3 109 68.8
FvH4_2g37120 Fragaria vesca HOM05D000372 ORTHO05D003436 4.1e-31 142.1 109 67.9
FAN20G1896 Fragaria x ananassa HOM05D000372 ORTHO05D003436 5.4e-31 141.7 109 67.9
Nitab4.5_0000502g0160 Nicotiana tabacum HOM05D000372 ORTHO05D003436 5.4e-31 141.7 109 67.0
Peaxi162Scf00288g01010 Petunia axillaris HOM05D000372 ORTHO05D003436 5.4e-31 141.7 109 66.1
AUR62020299 Chenopodium quinoa HOM05D000372 ORTHO05D003436 7.0e-31 141.4 90 80.0
FAN27G2462 Fragaria x ananassa HOM05D000372 ORTHO05D003436 7.0e-31 141.4 109 67.0
PGSC0003DMG400029542 Solanum tuberosum HOM05D000372 ORTHO05D003436 7.0e-31 141.4 109 67.9
C02p04600 Brassica napus HOM05D000372 ORTHO05D003436 9.1e-31 141.0 104 71.2
CAN.G808.7 Capsicum annuum HOM05D000372 ORTHO05D003436 9.1e-31 141.0 109 66.1
CARHR202600 Cardamine hirsuta HOM05D000372 ORTHO05D003436 1.6e-30 140.2 104 70.2
Manes.03G005600 Manihot esculenta HOM05D000372 ORTHO05D003436 1.6e-30 140.2 110 68.2
SalBow4G3322 Salvia bowleyana HOM05D000372 ORTHO05D003436 1.6e-30 140.2 104 69.2
Cc08_g06200 Coffea canephora HOM05D000372 ORTHO05D003436 2.0e-30 139.8 110 66.4
Psat5g033760 Pisum sativum HOM05D000372 ORTHO05D003436 2.0e-30 139.8 114 64.9
BcaC03g13326 Brassica carinata HOM05D000372 ORTHO05D003436 2.7e-30 139.4 104 70.2
Hma1.2p1_0102F.1_g049740 Hydrangea macrophylla HOM05D000372 ORTHO05D003436 3.5e-30 139.0 111 64.0
AUR62037701 Chenopodium quinoa HOM05D000372 ORTHO05D003436 4.5e-30 138.7 98 72.4
EL10Ac2g02429 Beta vulgaris HOM05D000372 ORTHO05D003436 5.9e-30 138.3 96 76.0
Solyc08g068960.3 Solanum lycopersicum HOM05D000372 ORTHO05D003436 5.9e-30 138.3 109 67.0
Sopen08g022620 Solanum pennellii HOM05D000372 ORTHO05D003436 5.9e-30 138.3 109 67.0
Ah.10g025030 Amaranthus hybridus HOM05D000372 ORTHO05D003436 7.7e-30 137.9 103 71.8
BolC2t06420H Brassica oleracea HOM05D000372 ORTHO05D003436 7.7e-30 137.9 104 71.2
arahy.Tifrunner.gnm1.ann1.IKLL4G Arachis hypogaea HOM05D000372 ORTHO05D003436 1.7e-29 136.7 107 66.4
ECA246G0477 Erigeron canadensis HOM05D000372 ORTHO05D003436 1.7e-29 136.7 107 63.6
BcaB05g21500 Brassica carinata HOM05D000372 ORTHO05D003436 2.3e-29 136.3 104 70.2
A02p00610 Brassica napus HOM05D000372 ORTHO05D003436 2.3e-29 136.3 104 70.2
BraA02t05044Z Brassica rapa HOM05D000372 ORTHO05D003436 2.3e-29 136.3 104 70.2
CSS0035630 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 2.3e-29 136.3 106 66.0
Migut.E00913 Erythranthe guttata HOM05D000372 ORTHO05D003436 2.3e-29 136.3 105 66.7
arahy.Tifrunner.gnm1.ann1.2363PW Arachis hypogaea HOM05D000372 ORTHO05D003436 2.9e-29 136.0 107 65.4
Migut.E01430 Erythranthe guttata HOM05D000372 ORTHO05D003436 2.9e-29 136.0 78 83.3
AL6G21260 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 5.0e-29 135.2 94 72.3
Carub.0006s0919 Capsella rubella HOM05D000372 ORTHO05D003436 5.0e-29 135.2 104 67.3
Rhsim07G0169300 Rhododendron simsii HOM05D000372 ORTHO05D003436 5.0e-29 135.2 106 65.1
THA.LOC104819942 Tarenaya hassleriana HOM05D000372 ORTHO05D003436 5.0e-29 135.2 136 55.9
AL6G21200 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 6.6e-29 134.8 96 70.8
DCAR_003039 Daucus carota HOM05D000372 ORTHO05D003436 6.6e-29 134.8 116 59.5
Migut.A00416 Erythranthe guttata HOM05D000372 ORTHO05D003436 6.6e-29 134.8 100 68.0
AT5G10720 Arabidopsis thaliana HOM05D000372 ORTHO05D003436 8.6e-29 134.4 104 67.3
Thhalv10012606m.g Eutrema salsugineum HOM05D000372 ORTHO05D003436 1.1e-28 134.0 100 66.0
Lsat_1_v5_gn_3_25440 Lactuca sativa HOM05D000372 ORTHO05D003436 1.1e-28 134.0 107 62.6
Sp6g32740 Schrenkiella parvula HOM05D000372 ORTHO05D003436 1.1e-28 134.0 95 71.6
Aa31LG3G16390 Aethionema arabicum HOM05D000372 ORTHO05D003436 1.5e-28 133.7 107 63.6
BcaB01g06275 Brassica carinata HOM05D000372 ORTHO05D003436 1.5e-28 133.7 110 63.6
BcaC04g19290 Brassica carinata HOM05D000372 ORTHO05D003436 1.5e-28 133.7 89 74.2
A03p04730 Brassica napus HOM05D000372 ORTHO05D003436 1.5e-28 133.7 104 68.3
C09p66090 Brassica napus HOM05D000372 ORTHO05D003436 1.5e-28 133.7 89 74.2
BolC9t59429H Brassica oleracea HOM05D000372 ORTHO05D003436 1.5e-28 133.7 89 74.2
BraA03t09813Z Brassica rapa HOM05D000372 ORTHO05D003436 1.5e-28 133.7 104 68.3
ECA240G4325 Erigeron canadensis HOM05D000372 ORTHO05D003436 1.5e-28 133.7 107 63.6
A10p26890 Brassica napus HOM05D000372 ORTHO05D003436 3.3e-28 132.5 89 73.0
BraA10t44741Z Brassica rapa HOM05D000372 ORTHO05D003436 3.3e-28 132.5 89 73.0
Sc09g0010830 Simmondsia chinensis HOM05D000372 ORTHO05D003436 4.2e-28 132.1 106 65.1
BcaB08g37314 Brassica carinata HOM05D000372 ORTHO05D003436 7.2e-28 131.3 85 75.3
Sp2g22540 Schrenkiella parvula HOM05D000372 ORTHO05D003436 7.2e-28 131.3 114 62.3
BcaB01g05503 Brassica carinata HOM05D000372 ORTHO05D003436 9.5e-28 131.0 104 67.3
C03p05430 Brassica napus HOM05D000372 ORTHO05D003436 9.5e-28 131.0 104 67.3
BolC3t13054H Brassica oleracea HOM05D000372 ORTHO05D003436 9.5e-28 131.0 104 67.3
CSS0030725 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 9.5e-28 131.0 109 61.5
HanXRQChr06g0174111 Helianthus annuus HOM05D000372 ORTHO05D003436 9.5e-28 131.0 109 63.3
MBI14_g24282_MAGBIO Magnolia biondii HOM05D000372 ORTHO05D003436 1.2e-27 130.6 118 62.7
Sc23g0006190 Simmondsia chinensis HOM05D000372 ORTHO05D003436 1.2e-27 130.6 117 62.4
CSS0002412 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 2.1e-27 129.8 88 71.6
HanXRQChr03g0082521 Helianthus annuus HOM05D000372 ORTHO05D003436 4.7e-27 128.6 97 66.0
CARHR155340 Cardamine hirsuta HOM05D000372 ORTHO05D003436 6.1e-27 128.3 104 64.4
THA.LOC104803327 Tarenaya hassleriana HOM05D000372 ORTHO05D003436 1.0e-26 127.5 80 77.5
Sp2g06120 Schrenkiella parvula HOM05D000372 ORTHO05D003436 1.8e-26 126.7 100 66.0
Oeu008770.2 Olea europaea HOM05D000372 ORTHO05D003436 3.0e-26 125.9 106 57.5
Os06g0654300 Oryza sativa ssp. japonica HOM05D000372 ORTHO05D003436 3.4e-25 122.5 75 80.0
PSO063G4267 Papaver somniferum HOM05D000372 ORTHO05D003436 3.4e-25 122.5 78 76.9
PSO782G1259 Papaver somniferum HOM05D000372 ORTHO05D003436 3.4e-25 122.5 78 76.9
Zm00001eb274910 Zea mays HOM05D000372 ORTHO05D003436 3.4e-25 122.5 85 75.3
Lsat_1_v5_gn_5_62200 Lactuca sativa HOM05D000372 ORTHO05D003436 4.4e-25 122.1 96 64.6
Zm00001eb389570 Zea mays HOM05D000372 ORTHO05D003436 4.4e-25 122.1 77 79.2
Lsat_1_v5_gn_3_116581 Lactuca sativa HOM05D000372 ORTHO05D003436 5.7e-25 121.7 110 58.2
SEGI_09005 Sequoiadendron giganteum HOM05D000372 ORTHO05D003436 2.7e-22 112.8 134 49.3
SGA_v2.0_scaffold121G33025 Striga asiatica HOM05D000372 ORTHO05D003436 2.7e-22 112.8 108 58.3
Aa31LG3G16400 Aethionema arabicum HOM05D000372 ORTHO05D003436 3.8e-21 109.0 80 66.2
Pp3c1_29920 Physcomitrium patens HOM05D000372 ORTHO05D003436 8.6e-21 107.8 79 69.6
Pp3c2_6520 Physcomitrium patens HOM05D000372 ORTHO05D003436 2.5e-20 106.3 79 68.4
Mapoly0139s0010 Marchantia polymorpha HOM05D000372 ORTHO05D003436 4.3e-20 105.5 82 64.6
Pp3c1_9540 Physcomitrium patens HOM05D000372 ORTHO05D003436 4.7e-19 102.1 80 65.0
Pp3c2_36790 Physcomitrium patens HOM05D000372 ORTHO05D003436 1.4e-18 100.5 108 50.9
CSS0031908 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 3.7e-16 92.4 56 80.4
SMO271G0024 Selaginella moellendorffii HOM05D000372 ORTHO05D003436 8.3e-16 91.3 104 48.1
HPP92_011627 Vanilla planifolia HOM05D000372 ORTHO05D003436 5.4e-15 88.6 55 76.4
Pp3c17_20830 Physcomitrium patens HOM05D000372 ORTHO05D003436 8.6e-13 81.3 79 49.4
CSS0018460 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.6e-11 77.0 49 75.5
Pp3c14_18760 Physcomitrium patens HOM05D000372 ORTHO05D003436 3.6e-11 75.9 104 40.4
Hund25587 Selenicereus undatus HOM05D000372 ORTHO05D003436 1.8e-10 73.6 40 87.5
Haze_18342 Corylus avellana HOM05D000372 ORTHO05D003436 5.2e-10 72.0 41 80.5
Aa31sc15G100 Aethionema arabicum HOM05D000372 ORTHO05D003436 3.4e-09 69.3 74 48.6
CBR_g23019 Chara braunii HOM05D000372 ORTHO05D003436 3.4e-09 69.3 75 44.0
CSS0045271 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.3e-08 67.4 56 66.1
CSS0020280 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 4.9e-08 65.5 41 75.6
vmacro05111 Vaccinium macrocarpon HOM05D000372 ORTHO05D003436 6.4e-08 65.1 59 57.6
vmacro17794 Vaccinium macrocarpon HOM05D000372 ORTHO05D051534 9.2e-07 61.2 41 68.3
AagrBONN_evm.TU.Sc2ySwM_228.1622 Anthoceros agrestis HOM05D000372 ORTHO05D000948 2.1e-06 60.1 109 35.8
Mapoly0011s0086 Marchantia polymorpha HOM05D000372 ORTHO05D003436 2.7e-06 59.7 75 40.0
CDE05G1629 Ceratophyllum demersum HOM05D000372 ORTHO05D000948 4.6e-06 58.9 107 37.4
vmacro16102 Vaccinium macrocarpon HOM05D000372 ORTHO05D000948 6.0e-06 58.5 102 37.3


User provided reference genes

Program Settings