Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g035880 Pisum sativum HOM05D005464 ORTHO05D006803 8.7e-54 213.4 108 100.0
Psat5g302720 Pisum sativum HOM05D005464 ORTHO05D006803 1.1e-43 179.9 106 85.8
Medtr2g103910 Medicago truncatula HOM05D005464 ORTHO05D006803 3.8e-41 171.4 106 83.0
TPR.G37199 Trifolium pratense HOM05D005464 ORTHO05D006803 6.5e-41 170.6 106 82.1
Ca_01055_v3 Cicer arietinum L. HOM05D005464 ORTHO05D006803 1.9e-40 169.1 106 80.2
VMungo1080G0510 Vigna mungo HOM05D005464 ORTHO05D006803 1.6e-39 166.0 106 79.2
Phvul.005G178300 Phaseolus vulgaris HOM05D005464 ORTHO05D006803 1.3e-38 162.9 106 79.2
Lj3g0027830 Lotus japonicus HOM05D005464 ORTHO05D006803 2.5e-37 158.7 106 78.3
Lalb_Chr14g0373811 Lupinus albus HOM05D005464 ORTHO05D006803 5.7e-37 157.5 110 75.5
Glyma.15G007300 Glycine max HOM05D005464 ORTHO05D006803 2.8e-36 155.2 106 74.5
Manes.11G057000 Manihot esculenta HOM05D005464 ORTHO05D006803 4.1e-35 151.4 104 70.2
Glyma.13G365800 Glycine max HOM05D005464 ORTHO05D006803 5.3e-35 151.0 107 74.8
ClCG07G012450 Citrullus lanatus HOM05D005464 ORTHO05D006803 7.6e-34 147.1 104 71.2
Ciclev10026304m.g Citrus clementina HOM05D005464 ORTHO05D006803 1.0e-33 146.7 101 70.3
EL10Ac9g21898 Beta vulgaris HOM05D005464 ORTHO05D006803 6.5e-33 144.1 104 69.2
MD17G1212300 Malus domestica HOM05D005464 ORTHO05D006803 1.9e-32 142.5 109 68.8
Gorai.009G128200 Gossypium raimondii HOM05D005464 ORTHO05D006803 2.5e-32 142.1 106 67.9
PGR031G2541 Punica granatum HOM05D005464 ORTHO05D006803 2.5e-32 142.1 102 69.6
CsaV3_4G001710 Cucumis sativus L. HOM05D005464 ORTHO05D006803 3.2e-32 141.7 105 69.5
CiPaw.02G157400 Carya illinoinensis HOM05D005464 ORTHO05D006803 4.2e-32 141.4 107 69.2
Gohir.A05G123300 Gossypium hirsutum HOM05D005464 ORTHO05D006803 4.2e-32 141.4 106 67.9
vmacro16896 Vaccinium macrocarpon HOM05D005464 ORTHO05D006803 4.2e-32 141.4 105 69.5
COL.COLO4_11947 Corchorus olitorius HOM05D005464 ORTHO05D006803 5.5e-32 141.0 108 71.3
Hund06557 Selenicereus undatus HOM05D005464 ORTHO05D006803 5.5e-32 141.0 104 66.3
DCAR_021346 Daucus carota HOM05D005464 ORTHO05D006803 7.2e-32 140.6 105 66.7
Eucgr.J03066 Eucalyptus grandis HOM05D005464 ORTHO05D006803 7.2e-32 140.6 106 67.0
Peaxi162Scf00207g00638 Petunia axillaris HOM05D005464 ORTHO05D006803 7.2e-32 140.6 104 70.2
TWI12G0099 Tripterygium wilfordii HOM05D005464 ORTHO05D006803 9.3e-32 140.2 103 68.0
arahy.Tifrunner.gnm1.ann1.JVJR89 Arachis hypogaea HOM05D005464 ORTHO05D006803 1.2e-31 139.8 89 76.4
arahy.Tifrunner.gnm1.ann1.Y6ZEHB Arachis hypogaea HOM05D005464 ORTHO05D006803 1.2e-31 139.8 89 76.4
Haze_16562 Corylus avellana HOM05D005464 ORTHO05D006803 1.2e-31 139.8 104 68.3
Prupe.3G087600 Prunus persica HOM05D005464 ORTHO05D006803 1.6e-31 139.4 106 67.0
MELO3C017863.2 Cucumis melo HOM05D005464 ORTHO05D006803 2.1e-31 139.0 105 67.6
Solyc06g068160.3 Solanum lycopersicum HOM05D005464 ORTHO05D006803 3.6e-31 138.3 104 67.3
Sopen06g025430 Solanum pennellii HOM05D005464 ORTHO05D006803 3.6e-31 138.3 104 67.3
SGA_v2.0_scaffold5G02698 Striga asiatica HOM05D005464 ORTHO05D006803 3.6e-31 138.3 106 65.1
Aqoxy7G02293 Aquilegia oxysepala HOM05D005464 ORTHO05D006803 4.6e-31 137.9 107 65.4
Lalb_Chr22g0350841 Lupinus albus HOM05D005464 ORTHO05D006803 4.6e-31 137.9 106 69.8
Rhsim12G0191100 Rhododendron simsii HOM05D005464 ORTHO05D006803 4.6e-31 137.9 105 68.6
Cfa001959 Carpinus fangiana HOM05D005464 ORTHO05D006803 6.1e-31 137.5 104 67.3
Lsat_1_v5_gn_4_89921 Lactuca sativa HOM05D005464 ORTHO05D006803 6.1e-31 137.5 101 66.3
ECA232G3027 Erigeron canadensis HOM05D005464 ORTHO05D006803 1.0e-30 136.7 105 67.6
Nitab4.5_0000373g0080 Nicotiana tabacum HOM05D005464 ORTHO05D006803 1.0e-30 136.7 104 68.3
CAN.G1503.8 Capsicum annuum HOM05D005464 ORTHO05D006803 2.3e-30 135.6 104 67.3
Nitab4.5_0006769g0010 Nicotiana tabacum HOM05D005464 ORTHO05D006803 2.3e-30 135.6 104 67.3
Actinidia15983 Actinidia chinensis HOM05D005464 ORTHO05D006803 3.0e-30 135.2 102 65.7
Cpa.g.sc10.270 Carica papaya HOM05D005464 ORTHO05D006803 3.0e-30 135.2 106 67.0
CSS0011845 Camellia sinensis var. sinensis HOM05D005464 ORTHO05D006803 3.9e-30 134.8 102 66.7
FAN09G2673 Fragaria x ananassa HOM05D005464 ORTHO05D006803 3.9e-30 134.8 113 62.8
FAN14G5059 Fragaria x ananassa HOM05D005464 ORTHO05D006803 3.9e-30 134.8 113 62.8
Sed0012798 Sechium edule HOM05D005464 ORTHO05D006803 3.9e-30 134.8 112 63.4
AUR62016335 Chenopodium quinoa HOM05D005464 ORTHO05D006803 5.1e-30 134.4 104 61.5
FvH4_6g29660 Fragaria vesca HOM05D005464 ORTHO05D006803 5.1e-30 134.4 113 62.8
RcHm_v2.0_Chr2g0135251 Rosa chinensis HOM05D005464 ORTHO05D006803 6.7e-30 134.0 113 62.8
PGSC0003DMG400028509 Solanum tuberosum HOM05D005464 ORTHO05D006803 6.7e-30 134.0 104 67.3
FAN05G5161 Fragaria x ananassa HOM05D005464 ORTHO05D006803 8.8e-30 133.7 113 62.8
THA.LOC104812511 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 8.8e-30 133.7 103 68.0
CSS0036664 Camellia sinensis var. sinensis HOM05D005464 ORTHO05D006803 1.1e-29 133.3 102 65.7
TAR383G0924 Trochodendron aralioides HOM05D005464 ORTHO05D006803 1.1e-29 133.3 101 70.3
Atru.chr1.2934 Acer truncatum HOM05D005464 ORTHO05D006803 1.9e-29 132.5 105 63.8
MSTRG.22747 Avicennia marina HOM05D005464 ORTHO05D006803 1.9e-29 132.5 106 65.1
Migut.I00762 Erythranthe guttata HOM05D005464 ORTHO05D006803 2.5e-29 132.1 104 64.4
HanXRQChr16g0500301 Helianthus annuus HOM05D005464 ORTHO05D006803 4.3e-29 131.3 104 64.4
Nn8g39510 Nelumbo nucifera HOM05D005464 ORTHO05D006803 4.3e-29 131.3 104 67.3
CANSAT56G0380 Cannabis sativa HOM05D005464 ORTHO05D006803 5.7e-29 131.0 113 61.9
GSVIVG01017342001 Vitis vinifera HOM05D005464 ORTHO05D006803 5.7e-29 131.0 103 66.0
SHI11227 Sapria himalayana HOM05D005464 ORTHO05D006803 9.7e-29 130.2 104 60.6
unitig_0.g1114 Utricularia gibba HOM05D005464 ORTHO05D006803 9.7e-29 130.2 102 61.8
Thecc.06G025100 Theobroma cacao HOM05D000467 ORTHO05D000379 1.3e-28 129.8 107 65.4
Sc06g0005900 Simmondsia chinensis HOM05D005464 ORTHO05D006803 2.8e-28 128.6 103 63.1
Aa31LG7G100 Aethionema arabicum HOM05D005464 ORTHO05D006803 4.8e-28 127.9 100 63.0
Dinv30606 Davidia involucrata HOM05D005464 ORTHO05D006803 4.8e-28 127.9 94 69.1
Gohir.D05G124200 Gossypium hirsutum HOM05D005464 ORTHO05D006803 4.8e-28 127.9 106 64.2
PSO017G6540 Papaver somniferum HOM05D005464 ORTHO05D006803 8.2e-28 127.1 107 65.4
MBI14_g16402_MAGBIO Magnolia biondii HOM05D005464 ORTHO05D006803 1.8e-27 125.9 102 64.7
Sp1g13650 Schrenkiella parvula HOM05D005464 ORTHO05D006803 4.1e-27 124.8 100 64.0
AT1G15330 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 5.3e-27 124.4 103 61.2
PSO170G0224 Papaver somniferum HOM05D005464 ORTHO05D006803 6.9e-27 124.0 109 60.6
BcaC05g25470 Brassica carinata HOM05D005464 ORTHO05D006803 2.0e-26 122.5 100 63.0
Thhalv10008048m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 2.0e-26 122.5 100 62.0
A06p11340 Brassica napus HOM05D005464 ORTHO05D006803 3.4e-26 121.7 100 63.0
BraA06t24313Z Brassica rapa HOM05D005464 ORTHO05D006803 3.4e-26 121.7 100 63.0
CARHR015860 Cardamine hirsuta HOM05D005464 ORTHO05D006803 3.4e-26 121.7 100 63.0
AT1G80090 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 4.5e-26 121.3 104 59.6
Eucgr.F03878 Eucalyptus grandis HOM05D005464 ORTHO05D006803 4.5e-26 121.3 114 54.4
Os02g0158900 Oryza sativa ssp. japonica HOM05D005464 ORTHO05D006803 5.9e-26 120.9 109 61.5
BolC5t30083H Brassica oleracea HOM05D005464 ORTHO05D006803 7.7e-26 120.6 100 62.0
Carub.0001s1508 Capsella rubella HOM05D005464 ORTHO05D006803 7.7e-26 120.6 100 62.0
AL1G27420 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 1.3e-25 119.8 100 61.0
C05p13460 Brassica napus HOM05D005464 ORTHO05D006803 1.3e-25 119.8 100 62.0
Zm00001eb232620 Zea mays HOM05D005464 ORTHO05D006803 1.3e-25 119.8 104 61.5
ATR0800G035 Amborella trichopoda HOM05D005464 ORTHO05D006803 2.2e-25 119.0 105 60.0
HPP92_016981 Vanilla planifolia HOM05D005464 ORTHO05D006803 1.1e-24 116.7 105 58.1
BcaB02g08721 Brassica carinata HOM05D005464 ORTHO05D006803 7.2e-24 114.0 111 55.0
AL2G41450 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 1.6e-23 112.8 111 55.9
AUR62011516 Chenopodium quinoa HOM05D005464 ORTHO05D006803 7.9e-23 110.5 85 63.5
BcaC08g47570 Brassica carinata HOM05D005464 ORTHO05D006803 1.0e-22 110.2 110 56.4
C06p54250 Brassica napus HOM05D005464 ORTHO05D006803 1.0e-22 110.2 110 56.4
BolC6t40438H Brassica oleracea HOM05D005464 ORTHO05D006803 1.0e-22 110.2 110 56.4
PGR102G0885 Punica granatum HOM05D005464 ORTHO05D006803 1.0e-22 110.2 101 55.4
Psat6g211360 Pisum sativum HOM05D005464 ORTHO05D006803 3.0e-22 108.6 107 59.8
AagrBONN_evm.TU.Sc2ySwM_344.2189 Anthoceros agrestis HOM05D005464 ORTHO05D006803 1.1e-21 106.7 104 51.0
Pp3c3_23830 Physcomitrium patens HOM05D005464 ORTHO05D006803 1.1e-21 106.7 104 53.8
THA.LOC104812509 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 1.5e-21 106.3 102 54.9
Thhalv10019455m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 3.3e-21 105.1 103 56.3
A07p45420 Brassica napus HOM05D005464 ORTHO05D006803 2.2e-20 102.4 110 51.8
BraA07t32046Z Brassica rapa HOM05D005464 ORTHO05D006803 2.2e-20 102.4 110 51.8
SMO201G0050 Selaginella moellendorffii HOM05D005464 ORTHO05D006803 3.7e-20 101.7 74 62.2
Mapoly0007s0086 Marchantia polymorpha HOM05D005464 ORTHO05D006803 8.2e-20 100.5 107 47.7
AagrBONN_evm.TU.Sc2ySwM_368.1642 Anthoceros agrestis HOM05D005464 ORTHO05D006803 4.1e-19 98.2 106 44.3
Sp5g35710 Schrenkiella parvula HOM05D005464 ORTHO05D006803 1.2e-18 96.7 81 61.7
Hma1.2p1_1144F.1_g261310 Hydrangea macrophylla HOM05D005464 ORTHO05D006803 3.4e-18 95.1 71 67.6
CARHR074410 Cardamine hirsuta HOM05D005464 ORTHO05D006803 7.7e-18 94.0 81 60.5
QL05p029759 Quercus lobata HOM05D005464 ORTHO05D006803 1.1e-11 73.6 104 44.2
QL05p030118 Quercus lobata HOM05D005464 ORTHO05D006803 1.1e-11 73.6 104 44.2
CBR_g24374 Chara braunii HOM05D005464 ORTHO05D006803 4.1e-11 71.6 105 35.2
Carub.0002s2743 Capsella rubella HOM05D005464 ORTHO05D006803 1.1e-08 63.5 58 56.9
Duzib160G0683 Durio zibethinus HOM05D005464 ORTHO05D006803 1.5e-08 63.2 62 58.1
Aa31LG4G370 Aethionema arabicum HOM05D005464 ORTHO05D006803 4.7e-07 58.2 58 50.0


User provided reference genes

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